Sinan G. Aksoy, Ryan Bennink, Yuzhou Chen et al.
We present and discuss seven different open problems in applied combinatorics. The application areas relevant to this compilation include quantum computing, algorithmic differentiation, topological data analysis, iterative methods, hypergraph cut algorithms, and power systems.
Yuzhou Chen, Jose Frias, Yulia R. Gel
Graph contrastive learning (GCL) has recently emerged as a new concept which allows for capitalizing on the strengths of graph neural networks (GNNs) to learn rich representations in a wide variety of applications which involve abundant unlabeled information. However, existing GCL approaches largely tend to overlook the important latent information on higher-order graph substructures. We address this limitation by introducing the concepts of topological invariance and extended persistence on graphs to GCL. In particular, we propose a new contrastive mode which targets topological representations of the two augmented views from the same graph, yielded by extracting latent shape properties of the graph at multiple resolutions. Along with the extended topological layer, we introduce a new extended persistence summary, namely, extended persistence landscapes (EPL) and derive its theoretical stability guarantees. Our extensive numerical results on biological, chemical, and social interaction graphs show that the new Topological Graph Contrastive Learning (TopoGCL) model delivers significant performance gains in unsupervised graph classification for 11 out of 12 considered datasets and also exhibits robustness under noisy scenarios.
Rolando Kindelan, José Frías, Mauricio Cerda et al.
Topological Data Analysis (TDA) is an emergent field that aims to discover topological information hidden in a dataset. TDA tools have been commonly used to create filters and topological descriptors to improve Machine Learning (ML) methods. This paper proposes an algorithm that applies TDA directly to multi-class classification problems, without any further ML stage, showing advantages for imbalanced datasets. The proposed algorithm builds a filtered simplicial complex on the dataset. Persistent Homology (PH) is applied to guide the selection of a sub-complex where unlabeled points obtain the label with the majority of votes from labeled neighboring points. We select 8 datasets with different dimensions, degrees of class overlap and imbalanced samples per class. On average, the proposed TDABC method was better than KNN and weighted-KNN. It behaves competitively with Local SVM and Random Forest baseline classifiers in balanced datasets, and it outperforms all baseline methods classifying entangled and minority classes.
Rolando Kindelan, José Frías, Mauricio Cerda et al.
Topological Data Analysis (TDA) is an emergent field that aims to discover topological information hidden in a dataset. TDA tools have been commonly used to create filters and topological descriptors to improve Machine Learning (ML) methods. This paper proposes an algorithm that applies TDA directly to multi-class classification problems, even imbalanced datasets, without any further ML stage. The proposed algorithm built a filtered simplicial complex on the dataset. Persistent homology is then applied to guide choosing a sub-complex where unlabeled points obtain the label with most votes from labeled neighboring points. To assess the proposed method, 8 datasets were selected with several degrees of class entanglement, variability on the samples per class, and dimensionality. On average, the proposed TDABC method was capable of overcoming baseline classifiers (wk-NN and k-NN) in each of the computed metrics, especially on classifying entangled and minority classes.