Reliable Node Similarity Matrix Guided Contrastive Graph ClusteringYunhui Liu, Xinyi Gao, Tieke He et al.
Graph clustering, which involves the partitioning of nodes within a graph into disjoint clusters, holds significant importance for numerous subsequent applications. Recently, contrastive learning, known for utilizing supervisory information, has demonstrated encouraging results in deep graph clustering. This methodology facilitates the learning of favorable node representations for clustering by attracting positively correlated node pairs and distancing negatively correlated pairs within the representation space. Nevertheless, a significant limitation of existing methods is their inadequacy in thoroughly exploring node-wise similarity. For instance, some hypothesize that the node similarity matrix within the representation space is identical, ignoring the inherent semantic relationships among nodes. Given the fundamental role of instance similarity in clustering, our research investigates contrastive graph clustering from the perspective of the node similarity matrix. We argue that an ideal node similarity matrix within the representation space should accurately reflect the inherent semantic relationships among nodes, ensuring the preservation of semantic similarities in the learned representations. In response to this, we introduce a new framework, Reliable Node Similarity Matrix Guided Contrastive Graph Clustering (NS4GC), which estimates an approximately ideal node similarity matrix within the representation space to guide representation learning. Our method introduces node-neighbor alignment and semantic-aware sparsification, ensuring the node similarity matrix is both accurate and efficiently sparse. Comprehensive experiments conducted on $8$ real-world datasets affirm the efficacy of learning the node similarity matrix and the superior performance of NS4GC.
Bootstrap Latents of Nodes and Neighbors for Graph Self-Supervised LearningYunhui Liu, Huaisong Zhang, Tieke He et al.
Contrastive learning is a significant paradigm in graph self-supervised learning. However, it requires negative samples to prevent model collapse and learn discriminative representations. These negative samples inevitably lead to heavy computation, memory overhead and class collision, compromising the representation learning. Recent studies present that methods obviating negative samples can attain competitive performance and scalability enhancements, exemplified by bootstrapped graph latents (BGRL). However, BGRL neglects the inherent graph homophily, which provides valuable insights into underlying positive pairs. Our motivation arises from the observation that subtly introducing a few ground-truth positive pairs significantly improves BGRL. Although we can't obtain ground-truth positive pairs without labels under the self-supervised setting, edges in the graph can reflect noisy positive pairs, i.e., neighboring nodes often share the same label. Therefore, we propose to expand the positive pair set with node-neighbor pairs. Subsequently, we introduce a cross-attention module to predict the supportiveness score of a neighbor with respect to the anchor node. This score quantifies the positive support from each neighboring node, and is encoded into the training objective. Consequently, our method mitigates class collision from negative and noisy positive samples, concurrently enhancing intra-class compactness. Extensive experiments are conducted on five benchmark datasets and three downstream task node classification, node clustering, and node similarity search. The results demonstrate that our method generates node representations with enhanced intra-class compactness and achieves state-of-the-art performance.
7.9LGAug 11, 2024
Scalable and Adaptive Spectral Embedding for Attributed Graph ClusteringYunhui Liu, Tieke He, Qing Wu et al.
Attributed graph clustering, which aims to group the nodes of an attributed graph into disjoint clusters, has made promising advancements in recent years. However, most existing methods face challenges when applied to large graphs due to the expensive computational cost and high memory usage. In this paper, we introduce Scalable and Adaptive Spectral Embedding (SASE), a simple attributed graph clustering method devoid of parameter learning. SASE comprises three main components: node features smoothing via $k$-order simple graph convolution, scalable spectral clustering using random Fourier features, and adaptive order selection. With these designs, SASE not only effectively captures global cluster structures but also exhibits linear time and space complexity relative to the graph size. Empirical results demonstrate the superiority of SASE. For example, on the ArXiv dataset with 169K nodes and 1.17M edges, SASE achieves a 6.9\% improvement in ACC and a $5.87\times$ speedup compared to the runner-up, S3GC.
Negative-Free Self-Supervised Gaussian Embedding of GraphsYunhui Liu, Tieke He, Tao Zheng et al.
Graph Contrastive Learning (GCL) has recently emerged as a promising graph self-supervised learning framework for learning discriminative node representations without labels. The widely adopted objective function of GCL benefits from two key properties: \emph{alignment} and \emph{uniformity}, which align representations of positive node pairs while uniformly distributing all representations on the hypersphere. The uniformity property plays a critical role in preventing representation collapse and is achieved by pushing apart augmented views of different nodes (negative pairs). As such, existing GCL methods inherently rely on increasing the quantity and quality of negative samples, resulting in heavy computational demands, memory overhead, and potential class collision issues. In this study, we propose a negative-free objective to achieve uniformity, inspired by the fact that points distributed according to a normalized isotropic Gaussian are uniformly spread across the unit hypersphere. Therefore, we can minimize the distance between the distribution of learned representations and the isotropic Gaussian distribution to promote the uniformity of node representations. Our method also distinguishes itself from other approaches by eliminating the need for a parameterized mutual information estimator, an additional projector, asymmetric structures, and, crucially, negative samples. Extensive experiments over seven graph benchmarks demonstrate that our proposal achieves competitive performance with fewer parameters, shorter training times, and lower memory consumption compared to existing GCL methods.
9.4LGFeb 9, 2025
Learning Accurate, Efficient, and Interpretable MLPs on Multiplex Graphs via Node-wise Multi-View Ensemble DistillationYunhui Liu, Zhen Tao, Xiang Zhao et al.
Multiplex graphs, with multiple edge types (graph views) among common nodes, provide richer structural semantics and better modeling capabilities. Multiplex Graph Neural Networks (MGNNs), typically comprising view-specific GNNs and a multi-view integration layer, have achieved advanced performance in various downstream tasks. However, their reliance on neighborhood aggregation poses challenges for deployment in latency-sensitive applications. Motivated by recent GNN-to-MLP knowledge distillation frameworks, we propose Multiplex Graph-Free Neural Networks (MGFNN and MGFNN+) to combine MGNNs' superior performance and MLPs' efficient inference via knowledge distillation. MGFNN directly trains student MLPs with node features as input and soft labels from teacher MGNNs as targets. MGFNN+ further employs a low-rank approximation-based reparameterization to learn node-wise coefficients, enabling adaptive knowledge ensemble from each view-specific GNN. This node-wise multi-view ensemble distillation strategy allows student MLPs to learn more informative multiplex semantic knowledge for different nodes. Experiments show that MGFNNs achieve average accuracy improvements of about 10% over vanilla MLPs and perform comparably or even better to teacher MGNNs (accurate); MGFNNs achieve a 35.40$\times$-89.14$\times$ speedup in inference over MGNNs (efficient); MGFNN+ adaptively assigns different coefficients for multi-view ensemble distillation regarding different nodes (interpretable).
7.1LGApr 19, 2025
Towards Anomaly-Aware Pre-Training and Fine-Tuning for Graph Anomaly DetectionYunhui Liu, Jiashun Cheng, Yiqing Lin et al.
Graph anomaly detection (GAD) has garnered increasing attention in recent years, yet remains challenging due to two key factors: (1) label scarcity stemming from the high cost of annotations and (2) homophily disparity at node and class levels. In this paper, we introduce Anomaly-Aware Pre-Training and Fine-Tuning (APF), a targeted and effective framework to mitigate the above challenges in GAD. In the pre-training stage, APF incorporates node-specific subgraphs selected via the Rayleigh Quotient, a label-free anomaly metric, into the learning objective to enhance anomaly awareness. It further introduces two learnable spectral polynomial filters to jointly learn dual representations that capture both general semantics and subtle anomaly cues. During fine-tuning, a gated fusion mechanism adaptively integrates pre-trained representations across nodes and dimensions, while an anomaly-aware regularization loss encourages abnormal nodes to preserve more anomaly-relevant information. Furthermore, we theoretically show that APF tends to achieve linear separability under mild conditions. Comprehensive experiments on 10 benchmark datasets validate the superior performance of APF in comparison to state-of-the-art baselines.