CHEM-PHOct 18, 2022
Generalized Many-Body Dispersion Correction through Random-phase Approximation for Chemically Accurate Density Functional TheoryPier Paolo Poier, Louis Lagardère, Jean-Philip Piquemal
We extend our recently proposed Deep Learning-aided many-body dispersion (DNN-MBD) model to quadrupole polarizability (Q) terms using a generalized Random Phase Approximation (RPA) formalism, thus enabling the inclusion of van der Waals contributions beyond dipole. The resulting DNN-MBDQ model only relies on ab initio-derived quantities as the introduced quadrupole polarizabilities are recursively retrieved from dipole ones, in turn modelled via the Tkatchenko-Scheffler method. A transferable and efficient deep-neuronal network (DNN) provides atom in molecule volumes, while a single range-separation parameter is used to couple the model to Density Functional Theory (DFT). Since it can be computed at a negligible cost, the DNN-MBDQ approach can be coupled with DFT functionals such as PBE,PBE0 and B86bPBE (dispersionless). The DNN-MBQ-corrected functionals reach chemical accuracy while exhibiting lower errors compared to their dipole-only counterparts.
CHEM-PHFeb 16
Faster Molecular Dynamics with Neural Network Potentials via Distilled Multiple Time-Stepping and Non-Conservative ForcesNicolaï Gouraud, Côme Cattin, Thomas Plé et al.
Following our previous work (J. Phys. Chem. Lett., 2026, 17, 5, 1288-1295), we propose the DMTS-NC approach, a distilled multi-time-step (DMTS) strategy using non conservative (NC) forces to further accelerate atomistic molecular dynamics simulations using foundation neural network models. There, a dual-level reversible reference system propagator algorithm (RESPA) formalism couples a target accurate conservative potential to a simplified distilled representation optimized for the production of non-conservative forces. Despite being non-conservative, the distilled architecture is designed to enforce key physical priors, such as equivariance under rotation and cancellation of atomic force components. These choices facilitate the distillation process and therefore improve drastically the robustness of simulation, significantly limiting the "holes" in the simpler potential, thus achieving excellent agreement with the forces data. Overall, the DMTS-NC scheme is found to be more stable and efficient than its conservative counterpart with additional speedups reaching 15-30% over DMTS. Requiring no finetuning steps, it is easier to implement and can be pushed to the limit of the systems physical resonances to maintain accuracy while providing maximum efficiency. As for DMTS, DMTS-NC is applicable to any neural network potential.
CHEM-PHMay 2, 2024
FeNNol: an Efficient and Flexible Library for Building Force-field-enhanced Neural Network PotentialsThomas Plé, Olivier Adjoua, Louis Lagardère et al.
Neural network interatomic potentials (NNPs) have recently proven to be powerful tools to accurately model complex molecular systems while bypassing the high numerical cost of ab-initio molecular dynamics simulations. In recent years, numerous advances in model architectures as well as the development of hybrid models combining machine-learning (ML) with more traditional, physically-motivated, force-field interactions have considerably increased the design space of ML potentials. In this paper, we present FeNNol, a new library for building, training and running force-field-enhanced neural network potentials. It provides a flexible and modular system for building hybrid models, allowing to easily combine state-of-the-art embeddings with ML-parameterized physical interaction terms without the need for explicit programming. Furthermore, FeNNol leverages the automatic differentiation and just-in-time compilation features of the Jax Python library to enable fast evaluation of NNPs, shrinking the performance gap between ML potentials and standard force-fields. This is demonstrated with the popular ANI-2x model reaching simulation speeds nearly on par with the AMOEBA polarizable force-field on commodity GPUs (GPU=Graphics processing unit). We hope that FeNNol will facilitate the development and application of new hybrid NNP architectures for a wide range of molecular simulation problems.
CHEM-PHAug 3, 2017
The Truncated Conjugate Gradient (TCG), a Non-iterative/Fixed-cost Strategy for Computing Polarization in Molecular Dynamics: Fast Evaluation of Analytical ForcesFélix Aviat, Louis Lagardère, Jean-Philip Piquemal
In a recent paper (J. Chem. Theory. Comput., 2017, 13, 180-190) we proposed the Truncated Conjugate Gradient (TCG) approach to compute the polarization energy and forces in polarizable molecular simulations. The method consists in truncating the Conjugate Gradient algorithm at a fixed predetermined order leading to a fixed computational cost and can thus be considered "non-iterative". This gives the possibility to derive analytical forces avoiding the usual energy conservation (i.e. drifts) issues occurring with iterative approaches. A key point concerns the evaluation of the 1