Yin Luo

Yin Luo, Qingchao Kong, Nan Xu et al.

As the latest advancements in natural language processing, large language models (LLMs) have achieved human-level language understanding and generation abilities in many real-world tasks, and even have been regarded as a potential path to the artificial general intelligence. To better facilitate research on LLMs, many open-source LLMs, such as Llama 2 and Falcon, have recently been proposed and gained comparable performances to proprietary models. However, these models are primarily designed for English scenarios and exhibit poor performances in Chinese contexts. In this technical report, we propose YAYI 2, including both base and chat models, with 30 billion parameters. YAYI 2 is pre-trained from scratch on a multilingual corpus which contains 2.65 trillion tokens filtered by our pre-training data processing pipeline. The base model is aligned with human values through supervised fine-tuning with millions of instructions and reinforcement learning from human feedback. Extensive experiments on multiple benchmarks, such as MMLU and CMMLU, consistently demonstrate that the proposed YAYI 2 outperforms other similar sized open-source models.

Sibo Wei, Peng Chen, Lifeng Dong et al.

Multi-omics studies often rely on pathway enrichment to interpret heterogeneous molecular changes, but pathway enrichment (PE)-based workflows inherit structural limitations of pathway resources, including curation lag, functional redundancy, and limited sensitivity to molecular states and interventions. Although recent work has explored using large language models (LLMs) to improve PE-based interpretation, the lack of a standardized benchmark for end-to-end multi-omics pathway mechanism elucidation has largely confined evaluation to small, manually curated datasets or ad hoc case studies, hindering reproducible progress. To address this issue, we introduce BIOME-Bench, constructed via a rigorous four-stage workflow, to evaluate two core capabilities of LLMs in multi-omics analysis: Biomolecular Interaction Inference and end-to-end Multi-Omics Pathway Mechanism Elucidation. We develop evaluation protocols for both tasks and conduct comprehensive experiments across multiple strong contemporary models. Experimental results demonstrate that existing models still exhibit substantial deficiencies in multi-omics analysis, struggling to reliably distinguish fine-grained biomolecular relation types and to generate faithful, robust pathway-level mechanistic explanations.

Zhaoyang Shang, Sibo Wei, Jianbin Guo et al.

Large Language Models (LLMs) excel in general tasks, but adapting them to specialized domains relies on high-quality supervised fine-tuning (SFT) data. Although existing methods can identify subsets of high-quality data and reduce training cost to some extent, their selection process still suffers from over-reliance on LLMs' internal knowledge, weak interpretability, and limited generalization. To address these limitations, we propose THTB (The Harder The Better), a cognitive science-inspired framework for instruction data selection and annotation guidance. THTB prioritizes higher-level cognitive instructions by combining quality filtering with intrinsic and extrinsic hardness scoring, offering interpretable and quantifiable criteria for efficient SFT, both in data selection and annotation guidance. Experiments show that THTB enables models trained on only 5% of the data to outperform full-dataset training, while achieving superior generalization compared with LLM-only selection. In addition, THTB provides effective annotation guidance in vertical domains, enabling a model trained on just 2% of the data to surpass models trained on much larger datasets, demonstrating strong potential for domain adaptation. Our code, datasets, and models are available on https://github.com/DYJG-research/THTB.

Xinglin Xiao, Yijie Wang, Nan Xu et al.

The difficulty of the information extraction task lies in dealing with the task-specific label schemas and heterogeneous data structures. Recent work has proposed methods based on large language models to uniformly model different information extraction tasks. However, these existing methods are deficient in their information extraction capabilities for Chinese languages other than English. In this paper, we propose an end-to-end chat-enhanced instruction tuning framework for universal information extraction (YAYI-UIE), which supports both Chinese and English. Specifically, we utilize dialogue data and information extraction data to enhance the information extraction performance jointly. Experimental results show that our proposed framework achieves state-of-the-art performance on Chinese datasets while also achieving comparable performance on English datasets under both supervised settings and zero-shot settings.

Linzhuang Sun, Yao Dong, Nan Xu et al.

The development of Large Language Models (LLMs) provides human-centered Artificial General Intelligence (AGI) with a glimmer of hope. Empathy serves as a key emotional attribute of humanity, playing an irreplaceable role in human-centered AGI. Despite numerous researches aim to improve the cognitive empathy of models by incorporating external knowledge, there has been limited attention on the sensibility and rationality of the conversation itself, which are vital components of the empathy. However, the rationality information within the conversation is restricted, and previous methods of extending knowledge are subject to semantic conflict and single-role view. In this paper, we design an innovative encoder module inspired by self-presentation theory in sociology, which specifically processes sensibility and rationality sentences in dialogues. And we employ a LLM as a rational brain to decipher profound logical information preserved within the conversation, which assists our model in assessing the balance between sensibility and rationality to produce high-quality empathetic response. Experimental results demonstrate that our model outperforms other methods in both automatic and human evaluations.

Jingxuan Wei, Nan Xu, Guiyong Chang et al.

In the fields of computer vision and natural language processing, multimodal chart question-answering, especially involving color, structure, and textless charts, poses significant challenges. Traditional methods, which typically involve either direct multimodal processing or a table-to-text conversion followed by language model analysis, have limitations in effectively handling these complex scenarios. This paper introduces a novel multimodal chart question-answering model, specifically designed to address these intricate tasks. Our model integrates visual and linguistic processing, overcoming the constraints of existing methods. We adopt a dual-phase training approach: the initial phase focuses on aligning image and text representations, while the subsequent phase concentrates on optimizing the model's interpretative and analytical abilities in chart-related queries. This approach has demonstrated superior performance on multiple public datasets, particularly in handling color, structure, and textless chart questions, indicating its effectiveness in complex multimodal tasks.