Jean-Yves Tourneret

Jihanne El Haouari, Jean-Michel Gaucel, Christelle Pittet et al.

Accurate estimates of Instrument Spectral Response Functions (ISRFs) are crucial in order to have a good characterization of high resolution spectrometers. Spectrometers are composed of different optical elements that can induce errors in the measurements and therefore need to be modeled as accurately as possible. Parametric models are currently used to estimate these response functions. However, these models cannot always take into account the diversity of ISRF shapes that are encountered in practical applications. This paper studies a new ISRF estimation method based on a sparse representation of atoms belonging to a dictionary. This method is applied to different high-resolution spectrometers in order to assess its reproducibility for multiple remote sensing missions. The proposed method is shown to be very competitive when compared to the more commonly used parametric models, and yields normalized ISRF estimation errors less than 1%.

Clémence Allietta, Jean-Philippe Condomines, Jean-Yves Tourneret et al.

Hyperbolic geometry has recently garnered considerable attention in machine learning due to its capacity to embed hierarchical graph structures with low distortions for further downstream processing. This paper introduces a simple framework to detect local outliers for datasets grounded in hyperbolic 2-space referred to as HLoOP (Hyperbolic Local Outlier Probability). Within a Euclidean space, well-known techniques for local outlier detection are based on the Local Outlier Factor (LOF) and its variant, the LoOP (Local Outlier Probability), which incorporates probabilistic concepts to model the outlier level of a data vector. The developed HLoOP combines the idea of finding nearest neighbors, density-based outlier scoring with a probabilistic, statistically oriented approach. Therefore, the method consists in computing the Riemmanian distance of a data point to its nearest neighbors following a Gaussian probability density function expressed in a hyperbolic space. This is achieved by defining a Gaussian cumulative distribution in this space. The HLoOP algorithm is tested on the WordNet dataset yielding promising results. Code and data will be made available on request for reproductibility.

Florian Mouret, Alexandre Hippert-Ferrer, Frédéric Pascal et al.

This paper tackles the problem of missing data imputation for noisy and non-Gaussian data. A classical imputation method, the Expectation Maximization (EM) algorithm for Gaussian mixture models, has shown interesting properties when compared to other popular approaches such as those based on k-nearest neighbors or on multiple imputations by chained equations. However, Gaussian mixture models are known to be non-robust to heterogeneous data, which can lead to poor estimation performance when the data is contaminated by outliers or follows non-Gaussian distributions. To overcome this issue, a new EM algorithm is investigated for mixtures of elliptical distributions with the property of handling potential missing data. This paper shows that this problem reduces to the estimation of a mixture of Angular Gaussian distributions under generic assumptions (i.e., each sample is drawn from a mixture of elliptical distributions, which is possibly different for one sample to another). In that case, the complete-data likelihood associated with mixtures of elliptical distributions is well adapted to the EM framework with missing data thanks to its conditional distribution, which is shown to be a multivariate $t$-distribution. Experimental results on synthetic data demonstrate that the proposed algorithm is robust to outliers and can be used with non-Gaussian data. Furthermore, experiments conducted on real-world datasets show that this algorithm is very competitive when compared to other classical imputation methods.

Florian Mouret, Mohanad Albughdadi, Sylvie Duthoit et al.

Missing data is a recurrent problem in remote sensing, mainly due to cloud coverage for multispectral images and acquisition problems. This can be a critical issue for crop monitoring, especially for applications relying on machine learning techniques, which generally assume that the feature matrix does not have missing values. This paper proposes a Gaussian Mixture Model (GMM) for the reconstruction of parcel-level features extracted from multispectral images. A robust version of the GMM is also investigated, since datasets can be contaminated by inaccurate samples or features (e.g., wrong crop type reported, inaccurate boundaries, undetected clouds, etc). Additional features extracted from Synthetic Aperture Radar (SAR) images using Sentinel-1 data are also used to provide complementary information and improve the imputations. The robust GMM investigated in this work assigns reduced weights to the outliers during the estimation of the GMM parameters, which improves the final reconstruction. These weights are computed at each step of an Expectation-Maximization (EM) algorithm by using outlier scores provided by the isolation forest algorithm. Experimental validation is conducted on rapeseed and wheat parcels located in the Beauce region (France). Overall, we show that the GMM imputation method outperforms other reconstruction strategies. A mean absolute error (MAE) of 0.013 (resp. 0.019) is obtained for the imputation of the median Normalized Difference Index (NDVI) of the rapeseed (resp. wheat) parcels. Other indicators (e.g., Normalized Difference Water Index) and statistics (for instance the interquartile range, which captures heterogeneity among the parcel indicator) are reconstructed at the same time with good accuracy. In a dataset contaminated by irrelevant samples, using the robust GMM is recommended since the standard GMM imputation can lead to inaccurate imputed values.

Florian Mouret, Mohanad Albughdadi, Sylvie Duthoit et al.

This paper studies the detection of anomalous crop development at the parcel-level based on an unsupervised outlier detection technique. The experimental validation is conducted on rapeseed and wheat parcels located in Beauce (France). The proposed methodology consists of four sequential steps: 1) preprocessing of synthetic aperture radar (SAR) and multispectral images acquired using Sentinel-1 and Sentinel-2 satellites, 2) extraction of SAR and multispectral pixel-level features, 3) computation of parcel-level features using zonal statistics and 4) outlier detection. The different types of anomalies that can affect the studied crops are analyzed and described. The different factors that can influence the outlier detection results are investigated with a particular attention devoted to the synergy between Sentinel-1 and Sentinel-2 data. Overall, the best performance is obtained when using jointly a selection of Sentinel-1 and Sentinel-2 features with the isolation forest algorithm. The selected features are VV and VH backscattering coefficients for Sentinel-1 and 5 Vegetation Indexes for Sentinel-2 (among us, the Normalized Difference Vegetation Index and two variants of the Normalized Difference Water). When using these features with an outlier ratio of 10%, the percentage of detected true positives (i.e., crop anomalies) is equal to 94.1% for rapeseed parcels and 95.5% for wheat parcels.

Joshua Rapp, Charles Saunders, Julián Tachella et al.

Non-line-of-sight (NLOS) imaging is a rapidly growing field seeking to form images of objects outside the field of view, with potential applications in search and rescue, reconnaissance, and even medical imaging. The critical challenge of NLOS imaging is that diffuse reflections scatter light in all directions, resulting in weak signals and a loss of directional information. To address this problem, we propose a method for seeing around corners that derives angular resolution from vertical edges and longitudinal resolution from the temporal response to a pulsed light source. We introduce an acquisition strategy, scene response model, and reconstruction algorithm that enable the formation of 2.5-dimensional representations -- a plan view plus heights -- and a 180$^{\circ}$ field of view (FOV) for large-scale scenes. Our experiments demonstrate accurate reconstructions of hidden rooms up to 3 meters in each dimension.

Janka Hatvani, Adrian Basarab, Jean-Yves Tourneret et al.

Available super-resolution techniques for 3D images are either computationally inefficient prior-knowledge-based iterative techniques or deep learning methods which require a large database of known low- and high-resolution image pairs. A recently introduced tensor-factorization-based approach offers a fast solution without the use of known image pairs or strict prior assumptions. In this article this factorization framework is investigated for single image resolution enhancement with an off-line estimate of the system point spread function. The technique is applied to 3D cone beam computed tomography for dental image resolution enhancement. To demonstrate the efficiency of our method, it is compared to a recent state-of-the-art iterative technique using low-rank and total variation regularizations. In contrast to this comparative technique, the proposed reconstruction technique gives a 2-order-of-magnitude improvement in running time -- 2 minutes compared to 2 hours for a dental volume of 282$\times$266$\times$392 voxels. Furthermore, it also offers slightly improved quantitative results (peak signal-to-noise ratio, segmentation quality). Another advantage of the presented technique is the low number of hyperparameters. As demonstrated in this paper, the framework is not sensitive to small changes of its parameters, proposing an ease of use.

Qi Wei, Emilie Chouzenoux, Jean-Yves Tourneret et al.

This paper presents a fast approach for penalized least squares (LS) regression problems using a 2D Gaussian Markov random field (GMRF) prior. More precisely, the computation of the proximity operator of the LS criterion regularized by different GMRF potentials is formulated as solving a Sylvester-like matrix equation. By exploiting the structural properties of GMRFs, this matrix equation is solved columnwise in an analytical way. The proposed algorithm can be embedded into a wide range of proximal algorithms to solve LS regression problems including a convex penalty. Experiments carried out in the case of a constrained LS regression problem arising in a multichannel image processing application, provide evidence that an alternating direction method of multipliers performs quite efficiently in this context.

Tales Imbiriba, José Carlos M. Bermudez, Jean-Yves Tourneret et al.

A control logic has a central role in many echo cancellation systems for optimizing the performance of adaptive filters while estimating the echo path. For reliable control, accurate double-talk (DT) and channel change (CC) detectors are usually incorporated to the echo canceler. This work expands the usual detection strategy to define a classification problem characterizing four possible states of the echo canceler operation. The new formulation allow the use of decision theory to continuously control the transitions among the different modes of operation. The classification rule reduces to a low cost statistics for which it is possible to determine the probability of error under all hypotheses, allowing the classification performance to be accessed analytically. Monte Carlo simulations using synthetic and real data illustrate the reliability of the proposed method.

Abdelghafour Halimi, Hadj Batatia, Jimmy Le Digabel et al.

This paper studies a new Bayesian algorithm for the joint reconstruction and classification of reflectance confocal microscopy (RCM) images, with application to the identification of human skin lentigo. The proposed Bayesian approach takes advantage of the distribution of the multiplicative speckle noise affecting the true reflectivity of these images and of appropriate priors for the unknown model parameters. A Markov chain Monte Carlo (MCMC) algorithm is proposed to jointly estimate the model parameters and the image of true reflectivity while classifying images according to the distribution of their reflectivity. Precisely, a Metropolis-whitin-Gibbs sampler is investigated to sample the posterior distribution of the Bayesian model associated with RCM images and to build estimators of its parameters, including labels indicating the class of each RCM image. The resulting algorithm is applied to synthetic data and to real images from a clinical study containing healthy and lentigo patients.

Qi Wei, Marcus Chen, Jean-Yves Tourneret et al.

In the community of remote sensing, nonlinear mixing models have recently received particular attention in hyperspectral image processing. In this paper, we present a novel nonlinear spectral unmixing method following the recent multilinear mixing model of [1], which includes an infinite number of terms related to interactions between different endmembers. The proposed unmixing method is unsupervised in the sense that the endmembers are estimated jointly with the abundances and other parameters of interest, i.e., the transition probability of undergoing further interactions. Non-negativity and sum-to one constraints are imposed on abundances while only nonnegativity is considered for endmembers. The resulting unmixing problem is formulated as a constrained nonlinear optimization problem, which is solved by a block coordinate descent strategy, consisting of updating the endmembers, abundances and transition probability iteratively. The proposed method is evaluated and compared with linear unmixing methods for synthetic and real hyperspectral datasets acquired by the AVIRIS sensor. The advantage of using non-linear unmixing as opposed to linear unmixing is clearly shown in these examples.

Qi Wei, Nicolas Dobigeon, Jean-Yves Tourneret et al.

This paper proposes a robust fast multi-band image fusion method to merge a high-spatial low-spectral resolution image and a low-spatial high-spectral resolution image. Following the method recently developed in [1], the generalized Sylvester matrix equation associated with the multi-band image fusion problem is solved in a more robust and efficient way by exploiting the Woodbury formula, avoiding any permutation operation in the frequency domain as well as the blurring kernel invertibility assumption required in [1]. Thanks to this improvement, the proposed algorithm requires fewer computational operations and is also more robust with respect to the blurring kernel compared with the one in [1]. The proposed new algorithm is tested with different priors considered in [1]. Our conclusion is that the proposed fusion algorithm is more robust than the one in [1] with a reduced computational cost.

Qi Wei, Jose Bioucas-Dias, Nicolas Dobigeon et al.

This paper presents a multi-band image fusion algorithm based on unsupervised spectral unmixing for combining a high-spatial low-spectral resolution image and a low-spatial high-spectral resolution image. The widely used linear observation model (with additive Gaussian noise) is combined with the linear spectral mixture model to form the likelihoods of the observations. The non-negativity and sum-to-one constraints resulting from the intrinsic physical properties of the abundances are introduced as prior information to regularize this ill-posed problem. The joint fusion and unmixing problem is then formulated as maximizing the joint posterior distribution with respect to the endmember signatures and abundance maps, This optimization problem is attacked with an alternating optimization strategy. The two resulting sub-problems are convex and are solved efficiently using the alternating direction method of multipliers. Experiments are conducted for both synthetic and semi-real data. Simulation results show that the proposed unmixing based fusion scheme improves both the abundance and endmember estimation comparing with the state-of-the-art joint fusion and unmixing algorithms.

Pierre-Antoine Thouvenin, Nicolas Dobigeon, Jean-Yves Tourneret

Hyperspectral unmixing is aimed at identifying the reference spectral signatures composing an hyperspectral image and their relative abundance fractions in each pixel. In practice, the identified signatures may vary spectrally from an image to another due to varying acquisition conditions, thus inducing possibly significant estimation errors. Against this background, hyperspectral unmixing of several images acquired over the same area is of considerable interest. Indeed, such an analysis enables the endmembers of the scene to be tracked and the corresponding endmember variability to be characterized. Sequential endmember estimation from a set of hyperspectral images is expected to provide improved performance when compared to methods analyzing the images independently. However, the significant size of hyperspectral data precludes the use of batch procedures to jointly estimate the mixture parameters of a sequence of hyperspectral images. Provided that each elementary component is present in at least one image of the sequence, we propose to perform an online hyperspectral unmixing accounting for temporal endmember variability. The online hyperspectral unmixing is formulated as a two-stage stochastic program, which can be solved using a stochastic approximation. The performance of the proposed method is evaluated on synthetic and real data. A comparison with independent unmixing algorithms finally illustrates the interest of the proposed strategy.

Ningning Zhao, Qi Wei, Adrian Basarab et al.

This paper addresses the problem of single image super-resolution (SR), which consists of recovering a high resolution image from its blurred, decimated and noisy version. The existing algorithms for single image SR use different strategies to handle the decimation and blurring operators. In addition to the traditional first-order gradient methods, recent techniques investigate splitting-based methods dividing the SR problem into up-sampling and deconvolution steps that can be easily solved. Instead of following this splitting strategy, we propose to deal with the decimation and blurring operators simultaneously by taking advantage of their particular properties in the frequency domain, leading to a new fast SR approach. Specifically, an analytical solution can be obtained and implemented efficiently for the Gaussian prior or any other regularization that can be formulated into an $\ell_2$-regularized quadratic model, i.e., an $\ell_2$-$\ell_2$ optimization problem. Furthermore, the flexibility of the proposed SR scheme is shown through the use of various priors/regularizations, ranging from generic image priors to learning-based approaches. In the case of non-Gaussian priors, we show how the analytical solution derived from the Gaussian case can be embedded intotraditional splitting frameworks, allowing the computation cost of existing algorithms to be decreased significantly. Simulation results conducted on several images with different priors illustrate the effectiveness of our fast SR approach compared with the existing techniques.

Qi Wei, Jose Bioucas-Dias, Nicolas Dobigeon et al.

This paper presents a fast spectral unmixing algorithm based on Dykstra's alternating projection. The proposed algorithm formulates the fully constrained least squares optimization problem associated with the spectral unmixing task as an unconstrained regression problem followed by a projection onto the intersection of several closed convex sets. This projection is achieved by iteratively projecting onto each of the convex sets individually, following Dyktra's scheme. The sequence thus obtained is guaranteed to converge to the sought projection. Thanks to the preliminary matrix decomposition and variable substitution, the projection is implemented intrinsically in a subspace, whose dimension is very often much lower than the number of bands. A benefit of this strategy is that the order of the computational complexity for each projection is decreased from quadratic to linear time. Numerical experiments considering diverse spectral unmixing scenarios provide evidence that the proposed algorithm competes with the state-of-the-art, namely when the number of endmembers is relatively small, a circumstance often observed in real hyperspectral applications.

Laetitia Loncan, Luis B. Almeida, José M. Bioucas-Dias et al.

Pansharpening aims at fusing a panchromatic image with a multispectral one, to generate an image with the high spatial resolution of the former and the high spectral resolution of the latter. In the last decade, many algorithms have been presented in the literature for pansharpening using multispectral data. With the increasing availability of hyperspectral systems, these methods are now being adapted to hyperspectral images. In this work, we compare new pansharpening techniques designed for hyperspectral data with some of the state of the art methods for multispectral pansharpening, which have been adapted for hyperspectral data. Eleven methods from different classes (component substitution, multiresolution analysis, hybrid, Bayesian and matrix factorization) are analyzed. These methods are applied to three datasets and their effectiveness and robustness are evaluated with widely used performance indicators. In addition, all the pansharpening techniques considered in this paper have been implemented in a MATLAB toolbox that is made available to the community.

Tales Imbiriba, José Carlos Moreira Bermudez, Cédric Richard et al.

Mixing phenomena in hyperspectral images depend on a variety of factors such as the resolution of observation devices, the properties of materials, and how these materials interact with incident light in the scene. Different parametric and nonparametric models have been considered to address hyperspectral unmixing problems. The simplest one is the linear mixing model. Nevertheless, it has been recognized that mixing phenomena can also be nonlinear. The corresponding nonlinear analysis techniques are necessarily more challenging and complex than those employed for linear unmixing. Within this context, it makes sense to detect the nonlinearly mixed pixels in an image prior to its analysis, and then employ the simplest possible unmixing technique to analyze each pixel. In this paper, we propose a technique for detecting nonlinearly mixed pixels. The detection approach is based on the comparison of the reconstruction errors using both a Gaussian process regression model and a linear regression model. The two errors are combined into a detection statistics for which a probability density function can be reasonably approximated. We also propose an iterative endmember extraction algorithm to be employed in combination with the detection algorithm. The proposed Detect-then-Unmix strategy, which consists of extracting endmembers, detecting nonlinearly mixed pixels and unmixing, is tested with synthetic and real images.

Qi Wei, Nicolas Dobigeon, Jean-Yves Tourneret

This paper proposes a fast multi-band image fusion algorithm, which combines a high-spatial low-spectral resolution image and a low-spatial high-spectral resolution image. The well admitted forward model is explored to form the likelihoods of the observations. Maximizing the likelihoods leads to solving a Sylvester equation. By exploiting the properties of the circulant and downsampling matrices associated with the fusion problem, a closed-form solution for the corresponding Sylvester equation is obtained explicitly, getting rid of any iterative update step. Coupled with the alternating direction method of multipliers and the block coordinate descent method, the proposed algorithm can be easily generalized to incorporate prior information for the fusion problem, allowing a Bayesian estimator. Simulation results show that the proposed algorithm achieves the same performance as existing algorithms with the advantage of significantly decreasing the computational complexity of these algorithms.

Ningning Zhao, Adrian Basarab, Denis Kouame et al.

This paper proposes a joint segmentation and deconvolution Bayesian method for medical ultrasound (US) images. Contrary to piecewise homogeneous images, US images exhibit heavy characteristic speckle patterns correlated with the tissue structures. The generalized Gaussian distribution (GGD) has been shown to be one of the most relevant distributions for characterizing the speckle in US images. Thus, we propose a GGD-Potts model defined by a label map coupling US image segmentation and deconvolution. The Bayesian estimators of the unknown model parameters, including the US image, the label map and all the hyperparameters are difficult to be expressed in closed form. Thus, we investigate a Gibbs sampler to generate samples distributed according to the posterior of interest. These generated samples are finally used to compute the Bayesian estimators of the unknown parameters. The performance of the proposed Bayesian model is compared with existing approaches via several experiments conducted on realistic synthetic data and in vivo US images.

Sébastien Combrexelle, Herwig Wendt, Nicolas Dobigeon et al.

Texture characterization is a central element in many image processing applications. Multifractal analysis is a useful signal and image processing tool, yet, the accurate estimation of multifractal parameters for image texture remains a challenge. This is due in the main to the fact that current estimation procedures consist of performing linear regressions across frequency scales of the two-dimensional (2D) dyadic wavelet transform, for which only a few such scales are computable for images. The strongly non-Gaussian nature of multifractal processes, combined with their complicated dependence structure, makes it difficult to develop suitable models for parameter estimation. Here, we propose a Bayesian procedure that addresses the difficulties in the estimation of the multifractality parameter. The originality of the procedure is threefold: The construction of a generic semi-parametric statistical model for the logarithm of wavelet leaders; the formulation of Bayesian estimators that are associated with this model and the set of parameter values admitted by multifractal theory; the exploitation of a suitable Whittle approximation within the Bayesian model which enables the otherwise infeasible evaluation of the posterior distribution associated with the model. Performance is assessed numerically for several 2D multifractal processes, for several image sizes and a large range of process parameters. The procedure yields significant benefits over current benchmark estimators in terms of estimation performance and ability to discriminate between the two most commonly used classes of multifractal process models. The gains in performance are particularly pronounced for small image sizes, notably enabling for the first time the analysis of image patches as small as 64x64 pixels.

Qi Wei, José Bioucas-Dias, Nicolas Dobigeon et al.

This paper presents a variational based approach to fusing hyperspectral and multispectral images. The fusion process is formulated as an inverse problem whose solution is the target image assumed to live in a much lower dimensional subspace. A sparse regularization term is carefully designed, relying on a decomposition of the scene on a set of dictionaries. The dictionary atoms and the corresponding supports of active coding coefficients are learned from the observed images. Then, conditionally on these dictionaries and supports, the fusion problem is solved via alternating optimization with respect to the target image (using the alternating direction method of multipliers) and the coding coefficients. Simulation results demonstrate the efficiency of the proposed algorithm when compared with the state-of-the-art fusion methods.

Olivier Besson, Nicolas Dobigeon, Jean-Yves Tourneret

In this letter, we consider two sets of observations defined as subspace signals embedded in noise and we wish to analyze the distance between these two subspaces. The latter entails evaluating the angles between the subspaces, an issue reminiscent of the well-known Procrustes problem. A Bayesian approach is investigated where the subspaces of interest are considered as random with a joint prior distribution (namely a Bingham distribution), which allows the closeness of the two subspaces to be adjusted. Within this framework, the minimum mean-square distance estimator of both subspaces is formulated and implemented via a Gibbs sampler. A simpler scheme based on alternative maximum a posteriori estimation is also presented. The new schemes are shown to provide more accurate estimates of the angles between the subspaces, compared to singular value decomposition based independent estimation of the two subspaces.

Qi Wei, Nicolas Dobigeon, Jean-Yves Tourneret

In this paper, a Bayesian fusion technique for remotely sensed multi-band images is presented. The observed images are related to the high spectral and high spatial resolution image to be recovered through physical degradations, e.g., spatial and spectral blurring and/or subsampling defined by the sensor characteristics. The fusion problem is formulated within a Bayesian estimation framework. An appropriate prior distribution exploiting geometrical consideration is introduced. To compute the Bayesian estimator of the scene of interest from its posterior distribution, a Markov chain Monte Carlo algorithm is designed to generate samples asymptotically distributed according to the target distribution. To efficiently sample from this high-dimension distribution, a Hamiltonian Monte Carlo step is introduced in the Gibbs sampling strategy. The efficiency of the proposed fusion method is evaluated with respect to several state-of-the-art fusion techniques. In particular, low spatial resolution hyperspectral and multispectral images are fused to produce a high spatial resolution hyperspectral image.

Nicolas Dobigeon, Jean-Yves Tourneret, Cédric Richard et al.

When considering the problem of unmixing hyperspectral images, most of the literature in the geoscience and image processing areas relies on the widely used linear mixing model (LMM). However, the LMM may be not valid and other nonlinear models need to be considered, for instance, when there are multi-scattering effects or intimate interactions. Consequently, over the last few years, several significant contributions have been proposed to overcome the limitations inherent in the LMM. In this paper, we present an overview of recent advances in nonlinear unmixing modeling.

Yoann Altmann, Nicolas Dobigeon, Steve McLaughlin et al.

This paper presents an unsupervised algorithm for nonlinear unmixing of hyperspectral images. The proposed model assumes that the pixel reflectances result from a nonlinear function of the abundance vectors associated with the pure spectral components. We assume that the spectral signatures of the pure components and the nonlinear function are unknown. The first step of the proposed method consists of the Bayesian estimation of the abundance vectors for all the image pixels and the nonlinear function relating the abundance vectors to the observations. The endmembers are subsequently estimated using Gaussian process regression. The performance of the unmixing strategy is evaluated with simulations conducted on synthetic and real data.