Akbar Davoodi

Amir R. Asadi, Akbar Davoodi, Ramin Javadi et al.

Community detection in networks is a fundamental problem in machine learning and statistical inference, with applications in social networks, biological systems, and communication networks. The stochastic block model (SBM) serves as a canonical framework for studying community structure, and exact recovery, identifying the true communities with high probability, is a central theoretical question. While classical results characterize the phase transition for exact recovery based solely on graph connectivity, many real-world networks contain additional data, such as node attributes or labels. In this work, we study exact recovery in the Data Block Model (DBM), an SBM augmented with node-associated data, as formalized by Asadi, Abbe, and Verdú (2017). We introduce the Chernoff--TV divergence and use it to characterize a sharp exact recovery threshold for the DBM. We further provide an efficient algorithm that achieves this threshold, along with a matching converse result showing impossibility below the threshold. Finally, simulations validate our findings and demonstrate the benefits of incorporating vertex data as side information in community detection.

Jakob L. Andersen, Akbar Davoodi, Rolf Fagerberg et al.

The explosion of data available in life sciences is fueling an increasing demand for expressive models and computational methods. Graph transformation is a model for dynamic systems with a large variety of applications. We introduce a novel method of the graph transformation model construction, combining generative and dynamical viewpoints to give a fully automated data-driven model inference method. The method takes the input dynamical properties, given as a "snapshot" of the dynamics encoded by explicit transitions, and constructs a compatible model. The obtained model is guaranteed to be minimal, thus framing the approach as model compression (from a set of transitions into a set of rules). The compression is permissive to a lossy case, where the constructed model is allowed to exhibit behavior outside of the input transitions, thus suggesting a completion of the input dynamics. The task of graph transformation model inference is naturally highly challenging due to the combinatorics involved. We tackle the exponential explosion by proposing a heuristically minimal translation of the task into a well-established problem, set cover, for which highly optimized solutions exist. We further showcase how our results relate to Kolmogorov complexity expressed in terms of graph transformation.