Guoning Chen

Adeel Zafar, Zahra Poorshayegh, Lei Si et al.

Hairpin vortices are fundamental structures within turbulent boundary layers, playing a crucial role in energy dissipation, mixing, and momentum transport. However, accurately extracting these structures remains challenging due to their irregular shapes, varying scales, and entanglement with surrounding vortical structures. This paper presents a novel framework for the extraction of hairpin vortices from turbulent boundary layers. The method begins by identifying vortical regions and decomposing them into smaller segments using merge tree based segmentation. A novel bottom up rejoining approach is then introduced to group candidate segments according to the geometric and physical characteristics of hairpin vortices, resulting in regions that encompass complete hairpin vortex structures. These regions are subsequently refined and validated through skeleton analysis to detect the characteristic hairpin shape and are further confirmed using additional scalar based criteria. Finally, smooth enclosing surfaces are generated for effective visualization. To enable quantitative evaluation, reference hairpin vortices are extracted from several flow datasets and used as ground truth. Compared with existing approaches, the proposed method eliminates manual parameter tuning, reduces under and over segmentation, and significantly improves both accuracy and computational efficiency. Demonstrations on multiple turbulent flow cases show that the method is robust and effective for hairpin vortex extraction under varying boundary layer conditions.

Nguyen Phan, Brian Kim, Adeel Zafar et al.

Streamlines have been widely used to represent and analyze various steady vector fields. To sufficiently represent important features in complex vector fields (like flow), a large number of streamlines are required. Due to the lack of a rigorous definition of features or patterns in streamlines, user interaction and exploration are required to achieve effective interpretation. Existing approaches based on clustering or pattern search, while valuable for specific analysis tasks, often face challenges in supporting interactive and level-of-detail exploration of large-scale curve-based data, particularly when real-time parameter adjustment and iterative refinement are needed. To address this, we design and implement an interactive web-based system. Our system utilizes a Curve Segment Neighborhood Graph (CSNG) to encode the neighboring relationships between curve segments. CSNG enables us to adapt a fast community detection algorithm to identify coherent flow structures and spatial groupings in the streamlines interactively. CSNG also supports a multi-level exploration through an enhanced force-directed layout. Furthermore, our system integrates an adjacency matrix representation to reveal detailed inter-relations among segments. To achieve real-time performance within a web browser, our system employs matrix compression for memory-efficient CSNG storage and parallel processing. We have applied our system to analyze and interpret complex patterns in several streamline datasets. Our experiments show that we achieve real-time performance on datasets with hundreds of thousands of segments.

Nguyen K. Phan, Ricardo Morales, Sebastian D. Espriella et al.

We present a novel diffusion-based framework for synthesizing 2D vector fields from sparse, coherent inputs (i.e., streamlines) while maintaining physical plausibility. Our method employs a conditional denoising diffusion probabilistic model with classifier-free guidance, enabling progressive reconstruction that preserves both geometric and physical constraints. Experimental results demonstrate our method's ability to synthesize plausible vector fields that adhere to physical laws while maintaining fidelity to sparse input observations, outperforming traditional optimization-based approaches in terms of flexibility and physical consistency.

Kishansingh Rajput, Duong Binh Nguyen, Guoning Chen

Time-series data originate from various applications that describe specific observations or quantities of interest over time. Their analysis often involves the comparison across different time-series data sequences, which in turn requires the alignment of these sequences. Dynamic Time Warping (DTW) is the standard approach to achieve an optimal alignment between two temporal signals. Different variations of DTW have been proposed to address various needs for signal alignment or classifications. However, a comprehensive evaluation of their performance in these time-series data processing tasks is lacking. Most DTW measures perform well on certain types of time-series data without a clear explanation of the reason. To address that, we propose a synthesis framework to model the variation between two time-series data sequences for comparison. Our synthesis framework can produce a realistic initial signal and deform it with controllable variations that mimic real-world scenarios. With this synthesis framework, we produce a large number of time-series sequence pairs with different but known variations, which are used to assess the performance of a number of well-known DTW measures for the tasks of alignment and classification. We report their performance on different variations and suggest the proper DTW measure to use based on the type of variations between two time-series sequences. This is the first time such a guideline is presented for selecting a proper DTW measure. To validate our conclusion, we apply our findings to real-world applications, i.e., the detection of the formation top for the oil and gas industry and the pattern search in streamlines for flow visualization.

Meher Niger, Helya Goharbavang, Taeyong Ahn et al.

Microvascular networks are challenging to model because these structures are currently near the diffraction limit for most advanced three-dimensional imaging modalities, including confocal and light sheet microscopy. This makes semantic segmentation difficult, because individual components of these networks fluctuate within the confines of individual pixels. Level set methods are ideally suited to solve this problem by providing surface and topological constraints on the resulting model, however these active contour techniques are extremely time intensive and impractical for terabyte-scale images. We propose a reformulation and implementation of the region-scalable fitting (RSF) level set model that makes it amenable to three-dimensional evaluation using both single-instruction multiple data (SIMD) and single-program multiple-data (SPMD) parallel processing. This enables evaluation of the level set equation on independent regions of the data set using graphics processing units (GPUs), making large-scale segmentation of high-resolution networks practical and inexpensive. We tested this 3D parallel RSF approach on multiple data sets acquired using state-of-the-art imaging techniques to acquire microvascular data, including micro-CT, light sheet fluorescence microscopy (LSFM) and milling microscopy. To assess the performance and accuracy of the RSF model, we conducted a Monte-Carlo-based validation technique to compare results to other segmentation methods. We also provide a rigorous profiling to show the gains in processing speed leveraging parallel hardware. This study showcases the practical application of the RSF model, emphasizing its utility in the challenging domain of segmenting large-scale high-topology network structures with a particular focus on building microvascular models.