James Anibal

CL
h-index7
5papers
946citations
Novelty45%
AI Score34

5 Papers

6.7SDApr 2, 2024
Voice EHR: Introducing Multimodal Audio Data for Health

James Anibal, Hannah Huth, Ming Li et al.

Artificial intelligence (AI) models trained on audio data may have the potential to rapidly perform clinical tasks, enhancing medical decision-making and potentially improving outcomes through early detection. Existing technologies depend on limited datasets collected with expensive recording equipment in high-income countries, which challenges deployment in resource-constrained, high-volume settings where audio data may have a profound impact on health equity. This report introduces a novel data type and a corresponding collection system that captures health data through guided questions using only a mobile/web application. The app facilitates the collection of an audio electronic health record (Voice EHR) which may contain complex biomarkers of health from conventional voice/respiratory features, speech patterns, and spoken language with semantic meaning and longitudinal context, potentially compensating for the typical limitations of unimodal clinical datasets. This report presents the application used for data collection, initial experiments on data quality, and case studies which demonstrate the potential of voice EHR to advance the scalability/diversity of audio AI.

0.7CLOct 8, 2021
VieSum: How Robust Are Transformer-based Models on Vietnamese Summarization?

Hieu Nguyen, Long Phan, James Anibal et al.

Text summarization is a challenging task within natural language processing that involves text generation from lengthy input sequences. While this task has been widely studied in English, there is very limited research on summarization for Vietnamese text. In this paper, we investigate the robustness of transformer-based encoder-decoder architectures for Vietnamese abstractive summarization. Leveraging transfer learning and self-supervised learning, we validate the performance of the methods on two Vietnamese datasets.

0.5CLJun 18, 2021Code
SPBERT: An Efficient Pre-training BERT on SPARQL Queries for Question Answering over Knowledge Graphs

Hieu Tran, Long Phan, James Anibal et al.

In this paper, we propose SPBERT, a transformer-based language model pre-trained on massive SPARQL query logs. By incorporating masked language modeling objectives and the word structural objective, SPBERT can learn general-purpose representations in both natural language and SPARQL query language. We investigate how SPBERT and encoder-decoder architecture can be adapted for Knowledge-based QA corpora. We conduct exhaustive experiments on two additional tasks, including SPARQL Query Construction and Answer Verbalization Generation. The experimental results show that SPBERT can obtain promising results, achieving state-of-the-art BLEU scores on several of these tasks.

11.7CLMay 28, 2021Code
SciFive: a text-to-text transformer model for biomedical literature

Long N. Phan, James T. Anibal, Hieu Tran et al.

In this report, we introduce SciFive, a domain-specific T5 model that has been pre-trained on large biomedical corpora. Our model outperforms the current SOTA methods (i.e. BERT, BioBERT, Base T5) on tasks in named entity relation, relation extraction, natural language inference, and question-answering. We show that text-generation methods have significant potential in a broad array of biomedical NLP tasks, particularly those requiring longer, more complex outputs. Our results support the exploration of more difficult text generation tasks and the development of new methods in this area

58.4AIMay 18, 2021Code
CoTexT: Multi-task Learning with Code-Text Transformer

Long Phan, Hieu Tran, Daniel Le et al.

We present CoTexT, a pre-trained, transformer-based encoder-decoder model that learns the representative context between natural language (NL) and programming language (PL). Using self-supervision, CoTexT is pre-trained on large programming language corpora to learn a general understanding of language and code. CoTexT supports downstream NL-PL tasks such as code summarizing/documentation, code generation, defect detection, and code debugging. We train CoTexT on different combinations of available PL corpus including both "bimodal" and "unimodal" data. Here, bimodal data is the combination of text and corresponding code snippets, whereas unimodal data is merely code snippets. We first evaluate CoTexT with multi-task learning: we perform Code Summarization on 6 different programming languages and Code Refinement on both small and medium size featured in the CodeXGLUE dataset. We further conduct extensive experiments to investigate CoTexT on other tasks within the CodeXGlue dataset, including Code Generation and Defect Detection. We consistently achieve SOTA results in these tasks, demonstrating the versatility of our models.