Paul Klein

h-index19
2papers
1,462citations

2 Papers

13.5CVOct 14, 2024
EchoApex: A General-Purpose Vision Foundation Model for Echocardiography

Abdoul Aziz Amadou, Yue Zhang, Sebastien Piat et al.

Quantitative evaluation of echocardiography is essential for precise assessment of cardiac condition, monitoring disease progression, and guiding treatment decisions. The diverse nature of echo images, including variations in probe types, manufacturers, and pathologies, poses challenges for developing artificial intelligent models that can generalize across different clinical practice. We introduce EchoApex, the first general-purpose vision foundation model echocardiography with applications on a variety of clinical practice. Leveraging self-supervised learning, EchoApex is pretrained on over 20 million echo images from 11 clinical centres. By incorporating task-specific decoders and adapter modules, we demonstrate the effectiveness of EchoApex on 4 different kind of clinical applications with 28 sub-tasks, including view classification, interactive structure segmentation, left ventricle hypertrophy detection and automated ejection fraction estimation from view sequences. Compared to state-of-the-art task-specific models, EchoApex attains improved performance with a unified image encoding architecture, demonstrating the benefits of model pretraining at scale with in-domain data. Furthermore, EchoApex illustrates the potential for developing a general-purpose vision foundation model tailored specifically for echocardiography, capable of addressing a diverse range of clinical applications with high efficiency and efficacy.

13.3IVFeb 9, 2024
Cardiac ultrasound simulation for autonomous ultrasound navigation

Abdoul Aziz Amadou, Laura Peralta, Paul Dryburgh et al.

Ultrasound is well-established as an imaging modality for diagnostic and interventional purposes. However, the image quality varies with operator skills as acquiring and interpreting ultrasound images requires extensive training due to the imaging artefacts, the range of acquisition parameters and the variability of patient anatomies. Automating the image acquisition task could improve acquisition reproducibility and quality but training such an algorithm requires large amounts of navigation data, not saved in routine examinations. Thus, we propose a method to generate large amounts of ultrasound images from other modalities and from arbitrary positions, such that this pipeline can later be used by learning algorithms for navigation. We present a novel simulation pipeline which uses segmentations from other modalities, an optimized volumetric data representation and GPU-accelerated Monte Carlo path tracing to generate view-dependent and patient-specific ultrasound images. We extensively validate the correctness of our pipeline with a phantom experiment, where structures' sizes, contrast and speckle noise properties are assessed. Furthermore, we demonstrate its usability to train neural networks for navigation in an echocardiography view classification experiment by generating synthetic images from more than 1000 patients. Networks pre-trained with our simulations achieve significantly superior performance in settings where large real datasets are not available, especially for under-represented classes. The proposed approach allows for fast and accurate patient-specific ultrasound image generation, and its usability for training networks for navigation-related tasks is demonstrated.