Jungwon Choi

Balhae Kim, Jungwon Choi, Seanie Lee et al.

A Bayesian pseudocoreset is a small synthetic dataset for which the posterior over parameters approximates that of the original dataset. While promising, the scalability of Bayesian pseudocoresets is not yet validated in realistic problems such as image classification with deep neural networks. On the other hand, dataset distillation methods similarly construct a small dataset such that the optimization using the synthetic dataset converges to a solution with performance competitive with optimization using full data. Although dataset distillation has been empirically verified in large-scale settings, the framework is restricted to point estimates, and their adaptation to Bayesian inference has not been explored. This paper casts two representative dataset distillation algorithms as approximations to methods for constructing pseudocoresets by minimizing specific divergence measures: reverse KL divergence and Wasserstein distance. Furthermore, we provide a unifying view of such divergence measures in Bayesian pseudocoreset construction. Finally, we propose a novel Bayesian pseudocoreset algorithm based on minimizing forward KL divergence. Our empirical results demonstrate that the pseudocoresets constructed from these methods reflect the true posterior even in high-dimensional Bayesian inference problems.

Deokyun Kim, Jeongjun Lee, Jungwon Choi et al.

Detecting missing persons in forest environments remains a challenge, as dense canopy cover often conceals individuals from detection in top-down or oblique aerial imagery typically captured by Unmanned Aerial Vehicles (UAVs). While UAVs are effective for covering large, inaccessible areas, their aerial perspectives often miss critical visual cues beneath the forest canopy. This limitation underscores the need for under-canopy perspectives better suited for detecting missing persons in such environments. To address this gap, we introduce ForestPersons, a novel large-scale dataset specifically designed for under-canopy person detection. ForestPersons contains 96,482 images and 204,078 annotations collected under diverse environmental and temporal conditions. Each annotation includes a bounding box, pose, and visibility label for occlusion-aware analysis. ForestPersons provides ground-level and low-altitude perspectives that closely reflect the visual conditions encountered by Micro Aerial Vehicles (MAVs) during forest Search and Rescue (SAR) missions. Our baseline evaluations reveal that standard object detection models, trained on prior large-scale object detection datasets or SAR-oriented datasets, show limited performance on ForestPersons. This indicates that prior benchmarks are not well aligned with the challenges of missing person detection under the forest canopy. We offer this benchmark to support advanced person detection capabilities in real-world SAR scenarios. The dataset is publicly available at https://huggingface.co/datasets/etri/ForestPersons.

Hyun Do Jung, Jungwon Choi, Soojung Choi et al.

Whole-slide image (WSI) multiple instance learning (MIL) classifiers can achieve strong slide-level AUC while leaving the full-bag prediction opaque. Attention scores are widely reused as post-hoc explanations, but high attention can reflect aggregation preference rather than a compact, model-sufficient rationale. We study post-hoc rationale highlighting for frozen WSI-MIL: given a trained classifier, can its slide-level prediction be recovered from a compact, output-consistent tile subset without retraining the backbone? We instantiate this with Finding Optimal Contextual Instances (FOCI), a lightweight rationale-readout layer over a frozen MIL backbone. FOCI is trained with model-output sufficiency and exclusion objectives over keep/drop tile subsets, evaluated with an insertion-style Sequential Reveal Protocol (SRP) adapted to WSI-MIL, and summarized by the Selection Headroom Index (SHI). Across three WSI benchmarks and seven MIL backbones, FOCI reveals that compact rationales are selection-headroom dependent: transformer and multi-branch attention aggregators can admit compact rationales, near-minimal attention-pooling baselines enter a selection-saturation regime, and hard-selection backbones can conflict with an external readout. For TransMIL, relative to its documented CLS-proxy ranking, FOCI reduces the Minimum Sufficient K (MSK) tile count by 32-56% across benchmarks, while ACMIL+FOCI attains the highest mean SHI (+0.465). Deletion-based perturbation and selected-only downstream evaluation provide complementary checks. These results position FOCI as a model-level interpretability and audit layer: selected tiles are not claims of clinical or pathologist-level diagnostic sufficiency, but candidate rationales that offer a compact, reviewable view of when a frozen MIL prediction can be localized to a small output-consistent subset.

Jungwon Choi, Eunwoo Kim

Test-Time Prompt Tuning (TPT) adapts vision-language models using augmented views, but its effectiveness is hindered by the challenge of determining which views are beneficial. Standard entropy-based filtering relies on the internal confidence scores of the model, which are often miscalibrated under distribution shift, assigning high confidence to irrelevant crops or background regions while ignoring semantic content. To address this, we propose a dual-modality anchor-guided framework that grounds view selection in semantic evidence. We introduce a text anchor from attribute-rich descriptions, to provide fine-grained class semantics, and an adaptive image anchor that captures evolving test-time statistics. Using these anchors, we filter views based on alignment and confidence, ensuring that only informative views guide adaptation. Moreover, we treat the anchors as auxiliary predictive heads and combine their predictions with the original output in a confidence-weighted ensemble, yielding a stable supervision signal for prompt updates. Extensive experiments on 15 benchmark datasets demonstrate new state-of-the-art performance, highlighting the contribution of anchor-guided supervision as a foundation for robust prompt updates.

Jungwon Choi, Seongho Keum, EungGu Yun et al.

Deep neural networks trained on Functional Connectivity (FC) networks extracted from functional Magnetic Resonance Imaging (fMRI) data have gained popularity due to the increasing availability of data and advances in model architectures, including Graph Neural Network (GNN). Recent research on the application of GNN to FC suggests that exploiting the time-varying properties of the FC could significantly improve the accuracy and interpretability of the model prediction. However, the high cost of acquiring high-quality fMRI data and corresponding phenotypic labels poses a hurdle to their application in real-world settings, such that a model naïvely trained in a supervised fashion can suffer from insufficient performance or a lack of generalization on a small number of data. In addition, most Self-Supervised Learning (SSL) approaches for GNNs to date adopt a contrastive strategy, which tends to lose appropriate semantic information when the graph structure is perturbed or does not leverage both spatial and temporal information simultaneously. In light of these challenges, we propose a generative SSL approach that is tailored to effectively harness spatio-temporal information within dynamic FC. Our empirical results, experimented with large-scale (>50,000) fMRI datasets, demonstrate that our approach learns valuable representations and enables the construction of accurate and robust models when fine-tuned for downstream tasks.

Hyun Do Jung, Jungwon Choi, Hwiyoung Kim

We introduce ReaMIL (Reasoning- and Evidence-Aware MIL), a multiple instance learning approach for whole-slide histopathology that adds a light selection head to a strong MIL backbone. The head produces soft per-tile gates and is trained with a budgeted-sufficiency objective: a hinge loss that enforces the true-class probability to be $\geq τ$ using only the kept evidence, under a sparsity budget on the number of selected tiles. The budgeted-sufficiency objective yields small, spatially compact evidence sets without sacrificing baseline performance. Across TCGA-NSCLC (LUAD vs. LUSC), TCGA-BRCA (IDC vs. Others), and PANDA, ReaMIL matches or slightly improves baseline AUC and provides quantitative evidence-efficiency diagnostics. On NSCLC, it attains AUC 0.983 with a mean minimal sufficient K (MSK) $\approx 8.2$ tiles at $τ= 0.90$ and AUKC $\approx 0.864$, showing that class confidence rises sharply and stabilizes once a small set of tiles is kept. The method requires no extra supervision, integrates seamlessly with standard MIL training, and naturally yields slide-level overlays. We report accuracy alongside MSK, AUKC, and contiguity for rigorous evaluation of model behavior on WSIs.

Byung-Hoon Kim, Jungwon Choi, EungGu Yun et al.

Graph Transformers have recently been successful in various graph representation learning tasks, providing a number of advantages over message-passing Graph Neural Networks. Utilizing Graph Transformers for learning the representation of the brain functional connectivity network is also gaining interest. However, studies to date have underlooked the temporal dynamics of functional connectivity, which fluctuates over time. Here, we propose a method for learning the representation of dynamic functional connectivity with Graph Transformers. Specifically, we define the connectome embedding, which holds the position, structure, and time information of the functional connectivity graph, and use Transformers to learn its representation across time. We perform experiments with over 50,000 resting-state fMRI samples obtained from three datasets, which is the largest number of fMRI data used in studies by far. The experimental results show that our proposed method outperforms other competitive baselines in gender classification and age regression tasks based on the functional connectivity extracted from the fMRI data.

Joonhyeong Park, Byoungwoo Park, Chang-Bae Bang et al.

We introduce a foundational model for brain dynamics that utilizes stochastic optimal control (SOC) and amortized inference. Our method features a continuous-discrete state space model (SSM) that can robustly handle the intricate and noisy nature of fMRI signals. To address computational limitations, we implement an approximation strategy grounded in the SOC framework. Additionally, we present a simulation-free latent dynamics approach that employs locally linear approximations, facilitating efficient and scalable inference. For effective representation learning, we derive an Evidence Lower Bound (ELBO) from the SOC formulation, which integrates smoothly with recent advancements in self-supervised learning (SSL), thereby promoting robust and transferable representations. Pre-trained on extensive datasets such as the UKB, our model attains state-of-the-art results across a variety of downstream tasks, including demographic prediction, trait analysis, disease diagnosis, and prognosis. Moreover, evaluating on external datasets such as HCP-A, ABIDE, and ADHD200 further validates its superior abilities and resilience across different demographic and clinical distributions. Our foundational model provides a scalable and efficient approach for deciphering brain dynamics, opening up numerous applications in neuroscience.

Jungwon Choi, Hyungi Lee, Byung-Hoon Kim et al.

Graph Neural Networks (GNNs) have shown promise in learning dynamic functional connectivity for distinguishing phenotypes from human brain networks. However, obtaining extensive labeled clinical data for training is often resource-intensive, making practical application difficult. Leveraging unlabeled data thus becomes crucial for representation learning in a label-scarce setting. Although generative self-supervised learning techniques, especially masked autoencoders, have shown promising results in representation learning in various domains, their application to dynamic graphs for dynamic functional connectivity remains underexplored, facing challenges in capturing high-level semantic representations. Here, we introduce the Spatio-Temporal Joint Embedding Masked Autoencoder (ST-JEMA), drawing inspiration from the Joint Embedding Predictive Architecture (JEPA) in computer vision. ST-JEMA employs a JEPA-inspired strategy for reconstructing dynamic graphs, which enables the learning of higher-level semantic representations considering temporal perspectives, addressing the challenges in fMRI data representation learning. Utilizing the large-scale UK Biobank dataset for self-supervised learning, ST-JEMA shows exceptional representation learning performance on dynamic functional connectivity demonstrating superiority over previous methods in predicting phenotypes and psychiatric diagnoses across eight benchmark fMRI datasets even with limited samples and effectiveness of temporal reconstruction on missing data scenarios. These findings highlight the potential of our approach as a robust representation learning method for leveraging label-scarce fMRI data.

Mingyeong Kim, Jungwon Choi, Chaeyun Jang et al.

Vision-language models (VLMs) are often deployed on text-only inputs, although they are trained with images. We find that removing the vision modality causes large drops in accuracy and severe miscalibration, and the model does not behave like its original language backbone under text-only prompting. This failure is not explained only by missing semantic information. Even when text descriptions preserve key content, confidence becomes unreliable, while adding a visual signal through generated images partially restores accuracy and calibration. We propose the Latent Imagination Module (LIM), a lightweight cross-attention module that predicts imagined latent embeddings from textual input and feeds them into a frozen VLM backbone without pixel-level image synthesis. Across text-only benchmarks, unseen tasks, and missing-image scenarios, LIM improves accuracy and reduces calibration error. These results suggest that latent modality completion is a practical approach for reliable VLM inference under missing-modality.

Sahng-Min Han, Minjae Kim, Jinho Cha et al.

Deep learning in small and imbalanced biomedical datasets remains fundamentally constrained by unstable optimization and poor generalization. We present the first biomedical implementation of FOSSIL (Flexible Optimization via Sample-Sensitive Importance Learning), a regret-minimizing weighting framework that adaptively balances training emphasis according to sample difficulty. Using softmax-based uncertainty as a continuous measure of difficulty, we construct a four-stage curriculum (Easy-Very Hard) and integrate FOSSIL into both convolutional and transformer-based architectures for Mpox skin lesion diagnosis. Across all settings, FOSSIL substantially improves discrimination (AUC = 0.9573), calibration (ECE = 0.053), and robustness under real-world perturbations, outperforming conventional baselines without metadata, manual curation, or synthetic augmentation. The results position FOSSIL as a generalizable, data-efficient, and interpretable framework for difficulty-aware learning in medical imaging under data scarcity.

HyoungSeok Kim, JiHoon Kang, WooMyoung Park et al.

The regret bound of an optimization algorithms is one of the basic criteria for evaluating the performance of the given algorithm. By inspecting the differences between the regret bounds of traditional algorithms and adaptive one, we provide a guide for choosing an optimizer with respect to the given data set and the loss function. For analysis, we assume that the loss function is convex and its gradient is Lipschitz continuous.