Yue Fang

Jinyang Zhang, Hongxin Ding, Yue Fang et al.

Recent work has sought to understand Large Language Models (LLMs) reasoning, yet a principled, model-intrinsic signal that captures its layer-wise reasoning dynamics remains underexplored. We bridge this gap by demonstrating that the l2 norm of hidden states serves as an endogenous signal of the model's reasoning intensity. Using Sparse Autoencoders (SAEs) as a diagnostic probe, we observe that LLMs' internal reasoning is marked by a sharp increase in reasoning feature activations concentrated in late layers. Motivated by this pattern, we establish a formal link between reasoning intensity and the model's latent geometry and theoretically prove that the l2 norm of hidden states bounds the activation strength of SAE reasoning features. Empirical correlation analysis and causal interventions further validate the l2 norm as a faithful indicator, where heightened norms consistently correspond to critical reasoning steps. We then introduce three test-time scaling techniques guided by l2 norms: (i) Adaptive Layer-wise Reasoning Recursion, (ii) Endogenous Reasoning State Steering, and (iii) l2-guided Response Selection, which requires no additional training or data and is compatible with advanced inference engines. Experiments across model architectures and benchmarks show that l2-norm-based techniques significantly improve reasoning performance, offering a principled yet simple lens to perceive and control LLM latent reasoning dynamics. Our code is available at https://github.com/zjy1298/The-Tell-Tale-Norm.

Yue Fang, Weibin Liao, Yuxin Guo et al.

Clinical Reasoning on Electronic Health Records (EHRs) is a fundamental yet challenging task in modern healthcare. While in-context learning (ICL) offers a promising inference-time adaptation paradigm for large language models (LLMs) in EHR reasoning, existing methods face three fundamental challenges: (1) Perspective Limitation, where data-driven similarity fails to align with LLM reasoning needs and model-driven signals are constrained by limited clinical competence; (2) Cohort Awareness, as demonstrations are selected independently without modeling population-level structure; and (3) Information Aggregation, where redundancy and interaction effects among demonstrations are ignored, leading to diminishing marginal gains. To address these challenges, we propose GraphWalker, a principled demonstration selection framework for EHR-oriented ICL. GraphWalker (i) jointly models patient clinical information and LLM-estimated information gain by integrating data-driven and model-driven perspectives, (ii) incorporates Cohort Discovery to avoid noisy local optima, and (iii) employs a Lazy Greedy Search with Frontier Expansion algorithm to mitigate diminishing marginal returns in information aggregation. Extensive experiments on multiple real-world EHR benchmarks demonstrate that GraphWalker consistently outperforms state-of-the-art ICL baselines, yielding substantial improvements in clinical reasoning performance. Our code is open-sourced at https://github.com/PuppyKnightUniversity/GraphWalker

Hongxin Ding, Yue Fang, Runchuan Zhu et al.

Large Language Models(LLMs) excel in general tasks but struggle in specialized domains like healthcare due to limited domain-specific knowledge.Supervised Fine-Tuning(SFT) data construction for domain adaptation often relies on heuristic methods, such as GPT-4 annotation or manual data selection, with a data-centric focus on presumed diverse, high-quality datasets. However, these methods overlook the model's inherent knowledge distribution, introducing noise, redundancy, and irrelevant data, leading to a mismatch between the selected data and the model's learning task, resulting in suboptimal performance. To address this, we propose a two-stage model-centric data selection framework, Decomposed Difficulty Data Selection (3DS), which aligns data with the model's knowledge distribution for optimized adaptation. In Stage1, we apply Prompt-Driven Data Selection via Explicit Alignment, where the the model filters irrelevant or redundant data based on its internal knowledge. In Stage2, we perform Decomposed Difficulty Data Selection, where data selection is guided by our defined difficulty decomposition, using three metrics: Instruction Understanding, Response Confidence, and Response Correctness. Additionally, an attention-based importance weighting mechanism captures token importance for more accurate difficulty calibration. This two-stage approach ensures the selected data is not only aligned with the model's knowledge and preferences but also appropriately challenging for the model to learn, leading to more effective and targeted domain adaptation. In the case study of the medical domain, our extensive experiments on real-world healthcare datasets demonstrate the superiority of 3DS over exisiting methods in accuracy by over 5.29%. Our dataset and code has been open-sourced at https://github.com/PuppyKnightUniversity/3DS.

Yue Fang, Zhi Jin, Jie An et al.

Signal Temporal Logic (STL) is a formal language for specifying real-time behaviors of cyber-physical systems (CPS). Automatically transforming natural language requirements into STL specifications has received growing attention. Recent efforts leveraging large language models (LLMs) have demonstrated impressive performance, but some natural language requirements in practice contain vague or ambiguous information, which remains challenging for LLMs to handle. To address these challenges, we propose ClarifySTL, an interactive LLM-agent framework that enhances STL transformation through requirements clarification. ClarifySTL first detects vague expressions that indicate underspecified information in a requirement. If any vagueness is detected, it generates targeted clarification queries to guide users in supplementing the requirement until all necessary details are provided. Subsequently, if ClarifySTL detects ambiguities, it formulates focused ambiguity clarification queries and updates the requirements based on user feedback until all ambiguities are resolved. Finally, the requirements with vagueness and ambiguity clarified are transformed into STL specifications using LLMs. This interactive framework ensures that the resulting STL formulas faithfully capture user intent while reducing the burden on the user. We evaluate ClarifySTL on the representative benchmarks DeepSTL and STL-DivEn, as well as our newly introduced AmbiEval benchmark, which is specifically designed to assess the performance of the agents in handling vagueness and ambiguity, including both detection and query generation. The experimental results show that ClarifySTL is effective.

Yue Fang, Yuxin Guo, Jiaran Gao et al.

Improving large language models (LLMs) for electronic health record (EHR) reasoning is essential for enabling accurate and generalizable clinical predictions. While LLMs excel at medical text understanding, they underperform on EHR-based prediction tasks due to challenges in modeling temporally structured, high-dimensional data. Existing approaches often rely on hybrid paradigms, where LLMs serve merely as frozen prior retrievers while downstream deep learning (DL) models handle prediction, failing to improve the LLM's intrinsic reasoning capacity and inheriting the generalization limitations of DL models. To this end, we propose EAG-RL, a novel two-stage training framework designed to intrinsically enhance LLMs' EHR reasoning ability through expert attention guidance, where expert EHR models refer to task-specific DL models trained on EHR data. Concretely, EAG-RL first constructs high-quality, stepwise reasoning trajectories using expert-guided Monte Carlo Tree Search to effectively initialize the LLM's policy. Then, EAG-RL further optimizes the policy via reinforcement learning by aligning the LLM's attention with clinically salient features identified by expert EHR models. Extensive experiments on two real-world EHR datasets show that EAG-RL improves the intrinsic EHR reasoning ability of LLMs by an average of 14.62%, while also enhancing robustness to feature perturbations and generalization to unseen clinical domains. These results demonstrate the practical potential of EAG-RL for real-world deployment in clinical prediction tasks. Our code have been available at https://github.com/devilran6/EAG-RL.

Zhibang Yang, Xinke Jiang, Rihong Qiu et al.

Federated Retrieval (FR) routes queries across multiple external knowledge sources, to mitigate hallucinations of LLMs, when necessary external knowledge is distributed. However, existing methods struggle to retrieve high-quality and relevant documents for ambiguous queries, especially in cross-domain scenarios, which significantly limits their effectiveness in supporting downstream generation tasks. Inspired by Dynamic Information Flow (DIF), we propose DFAMS, a novel framework that leverages DIF to identify latent query intents and construct semantically aligned knowledge partitions for accurate retrieval across heterogeneous sources. Specifically, DFAMS probes the DIF in LLMs by leveraging gradient signals from a few annotated queries and employing Shapley value-based attribution to trace neuron activation paths associated with intent recognition and subdomain boundary detection. Then, DFAMS leverages DIF to train an alignment module via multi-prototype contrastive learning, enabling fine-grained intra-source modeling and inter-source semantic alignment across knowledge bases. Experimental results across five benchmarks show that DFAMS outperforms advanced FR methods by up to 14.37\% in knowledge classification accuracy, 5.38\% in retrieval recall, and 6.45\% in downstream QA accuracy, demonstrating its effectiveness in complex FR scenarios. Our code are anonymous available at https://anonymous.4open.science/r/DFAMS/

Jinyang Zhang, Yue Fang, Hongxin Ding et al.

Conventional continual pretraining (CPT) for large language model (LLM) domain adaptation often suffers from catastrophic forgetting and limited domain capacity. Existing strategies adopt layer expansion, introducing additional trainable parameters to accommodate new knowledge. However, the uniform expansion and updates still entangle general and domain learning, undermining its effectiveness. Our pilot studies reveal that LLMs exhibit functional specialization, where layers and units differentially encode general-critical capabilities, suggesting that parameter expansion and optimization should be function-aware. We then propose ADEPT, Adaptive Expansion and Dynamic Decoupled Tuning for continual pretraining, a two-stage framework for domain-adaptive CPT. ADEPT first performs General-Competence Guided Selective Layer Expansion, duplicating layers least critical for the general domain to increase representational capacity while minimizing interference with general knowledge. It then applies Adaptive Unit-Wise Decoupled Tuning, disentangling parameter units within expanded layers according to their general-domain importance and assigning asymmetric learning rates to balance knowledge injection and retention. Experiments on mathematical and medical benchmarks show that ADEPT outperforms full-parameter CPT by up to 5.76% on the general domain and 5.58% on the target domain with only 15% of parameters tuned and less than 50% training time. Ablation studies, theoretical analysis, and extended investigations further demonstrate the necessity of targeted expansion and decoupled optimization, providing new principles for efficient and robust domain-adaptive CPT. Our code is open-sourced at https://github.com/PuppyKnightUniversity/ADEPT

Xinke Jiang, Ruizhe Zhang, Yongxin Xu et al.

In this paper, we investigate the retrieval-augmented generation (RAG) based on Knowledge Graphs (KGs) to improve the accuracy and reliability of Large Language Models (LLMs). Recent approaches suffer from insufficient and repetitive knowledge retrieval, tedious and time-consuming query parsing, and monotonous knowledge utilization. To this end, we develop a Hypothesis Knowledge Graph Enhanced (HyKGE) framework, which leverages LLMs' powerful reasoning capacity to compensate for the incompleteness of user queries, optimizes the interaction process with LLMs, and provides diverse retrieved knowledge. Specifically, HyKGE explores the zero-shot capability and the rich knowledge of LLMs with Hypothesis Outputs to extend feasible exploration directions in the KGs, as well as the carefully curated prompt to enhance the density and efficiency of LLMs' responses. Furthermore, we introduce the HO Fragment Granularity-aware Rerank Module to filter out noise while ensuring the balance between diversity and relevance in retrieved knowledge. Experiments on two Chinese medical multiple-choice question datasets and one Chinese open-domain medical Q&A dataset with two LLM turbos demonstrate the superiority of HyKGE in terms of accuracy and explainability.

Hongxin Ding, Baixiang Huang, Yue Fang et al.

Interactive medical questioning is essential in real-world clinical consultations, where physicians must actively gather information from patients. While medical Large Language Models (LLMs) have shown impressive capabilities in static medical question answering, they predominantly operate under a reactive paradigm: generating answers directly without seeking additional information, which risks incorrect diagnoses in such interactive settings. To address this limitation, we propose ProMed, a reinforcement learning (RL) framework that transitions medical LLMs toward a proactive paradigm, equipping them with the ability to ask clinically valuable questions before decision-making. At the core of ProMed is the Shapley Information Gain (SIG) reward, which quantifies the clinical utility of each question by combining the amount of newly acquired information with its contextual importance, estimated via Shapley values. We integrate SIG into a two-stage training pipeline: (1) SIG-Guided Model Initialization uses Monte Carlo Tree Search (MCTS) to construct high-reward interaction trajectories to supervise the model, and (2) SIG-Augmented Policy Optimization, which integrates SIG and enhances RL with a novel SIG-guided Reward Distribution Mechanism that assigns higher rewards to informative questions for targeted optimization. Extensive experiments on two newly curated partial-information medical benchmarks demonstrate that ProMed significantly outperforms state-of-the-art methods by an average of 6.29% and delivers a 54.45% gain over the reactive paradigm, while also generalizing robustly to out-of-domain cases.

Yue Fang, Zhi Jin, Jie An et al.

Temporal Logic (TL), especially Signal Temporal Logic (STL), enables precise formal specification, making it widely used in cyber-physical systems such as autonomous driving and robotics. Automatically transforming NL into STL is an attractive approach to overcome the limitations of manual transformation, which is time-consuming and error-prone. However, due to the lack of datasets, automatic transformation currently faces significant challenges and has not been fully explored. In this paper, we propose an NL-STL dataset named STL-Diversity-Enhanced (STL-DivEn), which comprises 16,000 samples enriched with diverse patterns. To develop the dataset, we first manually create a small-scale seed set of NL-STL pairs. Next, representative examples are identified through clustering and used to guide large language models (LLMs) in generating additional NL-STL pairs. Finally, diversity and accuracy are ensured through rigorous rule-based filters and human validation. Furthermore, we introduce the Knowledge-Guided STL Transformation (KGST) framework, a novel approach for transforming natural language into STL, involving a generate-then-refine process based on external knowledge. Statistical analysis shows that the STL-DivEn dataset exhibits more diversity than the existing NL-STL dataset. Moreover, both metric-based and human evaluations indicate that our KGST approach outperforms baseline models in transformation accuracy on STL-DivEn and DeepSTL datasets.

XiuYu Zhang, Xiaolei Ye, Jui-Che Chang et al.

Three-dimensional (3D) objects have wide applications. Despite the growing interest in 3D modeling in academia and industries, designing and/or creating 3D objects from scratch remains time-consuming and challenging. With the development of generative artificial intelligence (AI), designers discover a new way to create images for ideation. However, generative AIs are less useful in creating 3D objects with satisfying qualities. To allow 3D designers to access a wide range of 3D objects for creative activities based on their specific demands, we propose a machine learning (ML) enhanced framework CLAS - named after the four-step of capture, label, associate, and search - to enable fully automatic retrieval of 3D objects based on user specifications leveraging the existing datasets of 3D objects. CLAS provides an effective and efficient method for any person or organization to benefit from their existing but not utilized 3D datasets. In addition, CLAS may also be used to produce high-quality 3D object synthesis datasets for training and evaluating 3D generative models. As a proof of concept, we created and showcased a search system with a web user interface (UI) for retrieving 6,778 3D objects of chairs in the ShapeNet dataset powered by CLAS. In a close-set retrieval setting, our retrieval method achieves a mean reciprocal rank (MRR) of 0.58, top 1 accuracy of 42.27%, and top 10 accuracy of 89.64%.

Wennan Chang, Pengtao Dang, Changlin Wan et al.

In this paper, we propose a Spatial Robust Mixture Regression model to investigate the relationship between a response variable and a set of explanatory variables over the spatial domain, assuming that the relationships may exhibit complex spatially dynamic patterns that cannot be captured by constant regression coefficients. Our method integrates the robust finite mixture Gaussian regression model with spatial constraints, to simultaneously handle the spatial nonstationarity, local homogeneity, and outlier contaminations. Compared with existing spatial regression models, our proposed model assumes the existence a few distinct regression models that are estimated based on observations that exhibit similar response-predictor relationships. As such, the proposed model not only accounts for nonstationarity in the spatial trend, but also clusters observations into a few distinct and homogenous groups. This provides an advantage on interpretation with a few stationary sub-processes identified that capture the predominant relationships between response and predictor variables. Moreover, the proposed method incorporates robust procedures to handle contaminations from both regression outliers and spatial outliers. By doing so, we robustly segment the spatial domain into distinct local regions with similar regression coefficients, and sporadic locations that are purely outliers. Rigorous statistical hypothesis testing procedure has been designed to test the significance of such segmentation. Experimental results on many synthetic and real-world datasets demonstrate the robustness, accuracy, and effectiveness of our proposed method, compared with other robust finite mixture regression, spatial regression and spatial segmentation methods.