Longfeng Wu

Longfeng Wu, Bowen Lei, Dongkuan Xu et al.

Rare categories abound in a number of real-world networks and play a pivotal role in a variety of high-stakes applications, including financial fraud detection, network intrusion detection, and rare disease diagnosis. Rare category analysis (RCA) refers to the task of detecting, characterizing, and comprehending the behaviors of minority classes in a highly-imbalanced data distribution. While the vast majority of existing work on RCA has focused on improving the prediction performance, a few fundamental research questions heretofore have received little attention and are less explored: How confident or uncertain is a prediction model in rare category analysis? How can we quantify the uncertainty in the learning process and enable reliable rare category analysis? To answer these questions, we start by investigating miscalibration in existing RCA methods. Empirical results reveal that state-of-the-art RCA methods are mainly over-confident in predicting minority classes and under-confident in predicting majority classes. Motivated by the observation, we propose a novel individual calibration framework, named CALIRARE, for alleviating the unique challenges of RCA, thus enabling reliable rare category analysis. In particular, to quantify the uncertainties in RCA, we develop a node-level uncertainty quantification algorithm to model the overlapping support regions with high uncertainty; to handle the rarity of minority classes in miscalibration calculation, we generalize the distribution-based calibration metric to the instance level and propose the first individual calibration measurement on graphs named Expected Individual Calibration Error (EICE). We perform extensive experimental evaluations on real-world datasets, including rare category characterization and model calibration tasks, which demonstrate the significance of our proposed framework.

Longfeng Wu, Yao Zhou, Dawei Zhou

Complementary recommendation gains increasing attention in e-commerce since it expedites the process of finding frequently-bought-with products for users in their shopping journey. Therefore, learning the product representation that can reflect this complementary relationship plays a central role in modern recommender systems. In this work, we propose a logical reasoning network, LOGIREC, to effectively learn embeddings of products as well as various transformations (projection, intersection, negation) between them. LOGIREC is capable of capturing the asymmetric complementary relationship between products and seamlessly extending to high-order recommendations where more comprehensive and meaningful complementary relationship is learned for a query set of products. Finally, we further propose a hybrid network that is jointly optimized for learning a more generic product representation. We demonstrate the effectiveness of our LOGIREC on multiple public real-world datasets in terms of various ranking-based metrics under both low-order and high-order recommendation scenarios.

Adithya Kulkarni, Fatimah Alotaibi, Xinyue Zeng et al.

Large Language Models (LLMs) are transforming scientific hypothesis generation and validation by enabling information synthesis, latent relationship discovery, and reasoning augmentation. This survey provides a structured overview of LLM-driven approaches, including symbolic frameworks, generative models, hybrid systems, and multi-agent architectures. We examine techniques such as retrieval-augmented generation, knowledge-graph completion, simulation, causal inference, and tool-assisted reasoning, highlighting trade-offs in interpretability, novelty, and domain alignment. We contrast early symbolic discovery systems (e.g., BACON, KEKADA) with modern LLM pipelines that leverage in-context learning and domain adaptation via fine-tuning, retrieval, and symbolic grounding. For validation, we review simulation, human-AI collaboration, causal modeling, and uncertainty quantification, emphasizing iterative assessment in open-world contexts. The survey maps datasets across biomedicine, materials science, environmental science, and social science, introducing new resources like AHTech and CSKG-600. Finally, we outline a roadmap emphasizing novelty-aware generation, multimodal-symbolic integration, human-in-the-loop systems, and ethical safeguards, positioning LLMs as agents for principled, scalable scientific discovery.

Tong Zeng, Longfeng Wu, Sarah Bratt et al.

A citation is a well-established mechanism for connecting scientific artifacts. Citation networks are used by citation analysis for a variety of reasons, prominently to give credit to scientists' work. However, because of current citation practices, scientists tend to cite only publications, leaving out other types of artifacts such as datasets. Datasets then do not get appropriate credit even though they are increasingly reused and experimented with. We develop a network flow measure, called DataRank, aimed at solving this gap. DataRank assigns a relative value to each node in the network based on how citations flow through the graph, differentiating publication and dataset flow rates. We evaluate the quality of DataRank by estimating its accuracy at predicting the usage of real datasets: web visits to GenBank and downloads of Figshare datasets. We show that DataRank is better at predicting this usage compared to alternatives while offering additional interpretable outcomes. We discuss improvements to citation behavior and algorithms to properly track and assign credit to datasets.