Zheyu Yao

Yichao Zhang, Ningyuan Deng, Xinyuan Song et al.

After AlphaFold won the Nobel Prize, protein prediction with deep learning once again became a hot topic. We comprehensively explore advanced deep learning methods applied to protein structure prediction and design. It begins by examining recent innovations in prediction architectures, with detailed discussions on improvements such as diffusion based frameworks and novel pairwise attention modules. The text analyses key components including structure generation, evaluation metrics, multiple sequence alignment processing, and network architecture, thereby illustrating the current state of the art in computational protein modelling. Subsequent chapters focus on practical applications, presenting case studies that range from individual protein predictions to complex biomolecular interactions. Strategies for enhancing prediction accuracy and integrating deep learning techniques with experimental validation are thoroughly explored. The later sections review the industry landscape of protein design, highlighting the transformative role of artificial intelligence in biotechnology and discussing emerging market trends and future challenges. Supplementary appendices provide essential resources such as databases and open source tools, making this volume a valuable reference for researchers and students.

Wentao Xu, Zhongming Yao, Weihao Li et al.

Constrained Reinforcement Learning (CRL) aims to optimize decision-making policies under constraint conditions, making it highly applicable to safety-critical domains such as autonomous driving, robotics, and power grid management. However, existing robust CRL approaches predominantly focus on single-step perturbations and temporally independent adversarial models, lacking explicit modeling of robustness against temporally coupled perturbations. To tackle these challenges, we propose TCRL, a novel temporal-coupled adversarial training framework for robust constrained reinforcement learning (TCRL) in worst-case scenarios. First, TCRL introduces a worst-case-perceived cost constraint function that estimates safety costs under temporally coupled perturbations without the need to explicitly model adversarial attackers. Second, TCRL establishes a dual-constraint defense mechanism on the reward to counter temporally coupled adversaries while maintaining reward unpredictability. Experimental results demonstrate that TCRL consistently outperforms existing methods in terms of robustness against temporally coupled perturbation attacks across a variety of CRL tasks.

Fengyu Li, Junhao Zhu, Kaishi Song et al.

Table Question Answering (TQA) aims to answer natural language questions over structured tables. Large Language Models (LLMs) enable promising solutions to this problem, with operator-centric solutions that generate table manipulation pipelines in a multi-step manner offering state-of-the-art performance. However, these solutions rely on multiple LLM calls, resulting in prohibitive latencies and computational costs. We propose Operation-R1, the first framework that trains lightweight LLMs (e.g., Qwen-4B/1.7B) via a novel variant of reinforcement learning with verifiable rewards to produce high-quality data-preparation pipelines for TQA in a single inference step. To train such an LLM, we first introduce a self-supervised rewarding mechanism to automatically obtain fine-grained pipeline-wise supervision signals for LLM training. We also propose variance-aware group resampling to mitigate training instability. To further enhance robustness of pipeline generation, we develop two complementary mechanisms: operation merge, which filters spurious operations through multi-candidate consensus, and adaptive rollback, which offers runtime protection against information loss in data transformation. Experiments on two benchmark datasets show that, with the same LLM backbone, Operation-R1 achieves average absolute accuracy gains of 9.55 and 6.08 percentage points over multi-step preparation baselines, with 79\% table compression and a 2.2$\times$ reduction in monetary cost.

Junhao Song, Yichao Zhang, Ziqian Bi et al.

Generative Adversarial Networks (GAN) have greatly influenced the development of computer vision and artificial intelligence in the past decade and also connected art and machine intelligence together. This book begins with a detailed introduction to the fundamental principles and historical development of GANs, contrasting them with traditional generative models and elucidating the core adversarial mechanisms through illustrative Python examples. The text systematically addresses the mathematical and theoretical underpinnings including probability theory, statistics, and game theory providing a solid framework for understanding the objectives, loss functions, and optimisation challenges inherent to GAN training. Subsequent chapters review classic variants such as Conditional GANs, DCGANs, InfoGAN, and LAPGAN before progressing to advanced training methodologies like Wasserstein GANs, GANs with gradient penalty, least squares GANs, and spectral normalisation techniques. The book further examines architectural enhancements and task-specific adaptations in generators and discriminators, showcasing practical implementations in high resolution image generation, artistic style transfer, video synthesis, text to image generation and other multimedia applications. The concluding sections offer insights into emerging research trends, including self-attention mechanisms, transformer-based generative models, and a comparative analysis with diffusion models, thus charting promising directions for future developments in both academic and applied settings.