Yu Gu

Xiao Liu, Hao Yu, Hanchen Zhang et al. · berkeley, microsoft-research

The potential of Large Language Model (LLM) as agents has been widely acknowledged recently. Thus, there is an urgent need to quantitatively \textit{evaluate LLMs as agents} on challenging tasks in interactive environments. We present AgentBench, a multi-dimensional benchmark that consists of 8 distinct environments to assess LLM-as-Agent's reasoning and decision-making abilities. Our extensive test over \num API-based and open-sourced (OSS) LLMs shows that, while top commercial LLMs present a strong ability of acting as agents in complex environments, there is a significant disparity in performance between them and many OSS competitors that are no larger than 70B. We identify the typical reasons of failures in environments and LLMs, showing that poor long-term reasoning, decision-making, and instruction following abilities are the main obstacles for developing usable LLM agents. Improving instruction following and training on high quality multi-round alignment data could improve agent performance. And different from existing assumptions, training on code present ambivalent impacts on different agent tasks. Datasets, environments, and an integrated evaluation package for AgentBench are released at https://github.com/THUDM/AgentBench.

Xiang Deng, Yu Gu, Boyuan Zheng et al. · microsoft-research

We introduce Mind2Web, the first dataset for developing and evaluating generalist agents for the web that can follow language instructions to complete complex tasks on any website. Existing datasets for web agents either use simulated websites or only cover a limited set of websites and tasks, thus not suitable for generalist web agents. With over 2,000 open-ended tasks collected from 137 websites spanning 31 domains and crowdsourced action sequences for the tasks, Mind2Web provides three necessary ingredients for building generalist web agents: 1) diverse domains, websites, and tasks, 2) use of real-world websites instead of simulated and simplified ones, and 3) a broad spectrum of user interaction patterns. Based on Mind2Web, we conduct an initial exploration of using large language models (LLMs) for building generalist web agents. While the raw HTML of real-world websites are often too large to be fed to LLMs, we show that first filtering it with a small LM significantly improves the effectiveness and efficiency of LLMs. Our solution demonstrates a decent level of performance, even on websites or entire domains the model has never seen before, but there is still a substantial room to improve towards truly generalizable agents. We open-source our dataset, model implementation, and trained models (https://osu-nlp-group.github.io/Mind2Web) to facilitate further research on building a generalist agent for the web.

Xiao Liu, Tianjie Zhang, Yu Gu et al. · cmu, microsoft-research

Large Multimodal Models (LMMs) have ushered in a new era in artificial intelligence, merging capabilities in both language and vision to form highly capable Visual Foundation Agents. These agents are postulated to excel across a myriad of tasks, potentially approaching general artificial intelligence. However, existing benchmarks fail to sufficiently challenge or showcase the full potential of LMMs in complex, real-world environments. To address this gap, we introduce VisualAgentBench (VAB), a comprehensive and pioneering benchmark specifically designed to train and evaluate LMMs as visual foundation agents across diverse scenarios, including Embodied, Graphical User Interface, and Visual Design, with tasks formulated to probe the depth of LMMs' understanding and interaction capabilities. Through rigorous testing across nine proprietary LMM APIs and eight open models, we demonstrate the considerable yet still developing agent capabilities of these models. Additionally, VAB constructs a trajectory training set constructed through hybrid methods including Program-based Solvers, LMM Agent Bootstrapping, and Human Demonstrations, promoting substantial performance improvements in LMMs through behavior cloning. Our work not only aims to benchmark existing models but also provides a solid foundation for future development into visual foundation agents. Code, train \& test data, and part of fine-tuned open LMMs are available at \url{https://github.com/THUDM/VisualAgentBench}.

Qi Chen, Shuhan Ding, Yu Gu et al.

Variational autoencoders (VAEs) compress high resolution CT volumes into compact latents while preserving clinically relevant structure. However, training CT-specific VAEs from scratch or heavily fine-tuning them incurs substantial computational and engineering cost, and often degrades under heterogeneous scanners, protocols, and diseases. This paper makes a progressive stride toward training-free medical VAEs by leveraging a critical observation: a single Foundation VAE, pretrained at scale on natural images and videos, can serve as a unified interface for CT Reconstruction, Augmentation, and Generation. With both encoder and decoder frozen, the Foundation VAE reconstructs CT volumes with preserved anatomy while suppressing acquisition noise; training segmentation models on these reconstructions improves surface accuracy by 3.9% NSD on average for pancreatic tumor and lung tumor. Within the same Foundation VAE latent space, a conditional latent diffusion model achieves 3.9% lower average FVD with 36.2% higher CT CLIP score, and improves multi-disease generation faithfulness across 18 types by 2.76% AUC. These results demonstrate Foundation VAEs as a practical interface for scalable CT representation reuse and faithful CT generation. Our code and demo are available at https://github.com/qic999/Foundation-VAE.

Jifan Yu, Xiaozhi Wang, Shangqing Tu et al. · tsinghua

The unprecedented performance of large language models (LLMs) necessitates improvements in evaluations. Rather than merely exploring the breadth of LLM abilities, we believe meticulous and thoughtful designs are essential to thorough, unbiased, and applicable evaluations. Given the importance of world knowledge to LLMs, we construct a Knowledge-oriented LLM Assessment benchmark (KoLA), in which we carefully design three crucial factors: (1) For \textbf{ability modeling}, we mimic human cognition to form a four-level taxonomy of knowledge-related abilities, covering $19$ tasks. (2) For \textbf{data}, to ensure fair comparisons, we use both Wikipedia, a corpus prevalently pre-trained by LLMs, along with continuously collected emerging corpora, aiming to evaluate the capacity to handle unseen data and evolving knowledge. (3) For \textbf{evaluation criteria}, we adopt a contrastive system, including overall standard scores for better numerical comparability across tasks and models and a unique self-contrast metric for automatically evaluating knowledge-creating ability. We evaluate $28$ open-source and commercial LLMs and obtain some intriguing findings. The KoLA dataset and open-participation leaderboard are publicly released at https://kola.xlore.cn and will be continuously updated to provide references for developing LLMs and knowledge-related systems.

Qing Yang, Pengcheng Huang, Xinze Li et al.

Long-video question answering remains challenging for Vision-Language Models (VLMs), as answer-relevant evidence is often sparse, transient, and temporally dispersed across lengthy video contexts. Existing frame-centric approaches improve efficiency through uniform sampling, query-aware frame selection, visual-token compression, and adaptive resolution strategies. However, they still rely on isolated and fragmented frames as the fundamental evidence units, limiting VLMs' ability to effectively capture coherent event-level semantics. To address this limitation, we propose MemoryCard, a video-memory-based augmentation framework that organizes long videos into self-contained Memory Cards. Specifically, MemoryCard first performs a self-reading process over videos and aligned utterances to segment the video into semantically coherent units, each corresponding to a distinct topic or event. For each unit, it generates an event-level video gist and selects representative visual moments, which are then rendered into unified Memory Cards for retrieval and question answering. Experimental results demonstrate that MemoryCard consistently improves long-video QA performance under comparable visual-token budgets, achieving up to a 21.8% relative improvement in accuracy. All code is available at https://github.com/NEUIR/MemoryCard.

Sicong Wang, Ruiting Dong, Yue Liu et al.

Real-world user behavior rarely consists of isolated actions; instead, it often forms intent flows governed by spatiotemporal dependencies. To provide integrated service recommendations, we focus on the task of Generative Spatiotemporal Intent Sequence Recommendation (GSISR), which aims to generate intent sequences that are logically coherent and physically executable within complex spatiotemporal contexts. While LLMs offer strong reasoning potential for GSISR, direct industrial deployment is limited by high inference latency and context-mismatched or physically infeasible plans. To address these challenges, we propose a generative framework, GPlan, that internalizes LLM reasoning into lightweight models through two components. First, to enable reasoning under strict latency constraints, we introduce Progressive Implicit CoT Distillation, which compresses explicit reasoning processes into reserved latent tokens, allowing small models to inherit complex planning logic without generating long reasoning text. Second, to address the disconnect between general knowledge and real-world constraints, we design Spatiotemporal Counterfactual DPO. By aligning the model with counterfactual context-plan pairs, we improve sensitivity to spatiotemporal context and reduce context-mismatched plans. Offline experiments and online A/B testing demonstrate that our approach improves sequence coherence and context responsiveness. Our implementation and the anonymized GSISR dataset are available at https://github.com/alibaba/GPlan.

Wenxuan Zhou, Sheng Zhang, Yu Gu et al. · microsoft-research

Large language models (LLMs) have demonstrated remarkable generalizability, such as understanding arbitrary entities and relations. Instruction tuning has proven effective for distilling LLMs into more cost-efficient models such as Alpaca and Vicuna. Yet such student models still trail the original LLMs by large margins in downstream applications. In this paper, we explore targeted distillation with mission-focused instruction tuning to train student models that can excel in a broad application class such as open information extraction. Using named entity recognition (NER) for case study, we show how ChatGPT can be distilled into much smaller UniversalNER models for open NER. For evaluation, we assemble the largest NER benchmark to date, comprising 43 datasets across 9 diverse domains such as biomedicine, programming, social media, law, finance. Without using any direct supervision, UniversalNER attains remarkable NER accuracy across tens of thousands of entity types, outperforming general instruction-tuned models such as Alpaca and Vicuna by over 30 absolute F1 points in average. With a tiny fraction of parameters, UniversalNER not only acquires ChatGPT's capability in recognizing arbitrary entity types, but also outperforms its NER accuracy by 7-9 absolute F1 points in average. Remarkably, UniversalNER even outperforms by a large margin state-of-the-art multi-task instruction-tuned systems such as InstructUIE, which uses supervised NER examples. We also conduct thorough ablation studies to assess the impact of various components in our distillation approach. We release the distillation recipe, data, and UniversalNER models to facilitate future research on targeted distillation.

Yu Gu, Yu Su · microsoft-research

Question answering on knowledge bases (KBQA) poses a unique challenge for semantic parsing research due to two intertwined challenges: large search space and ambiguities in schema linking. Conventional ranking-based KBQA models, which rely on a candidate enumeration step to reduce the search space, struggle with flexibility in predicting complicated queries and have impractical running time. In this paper, we present ArcaneQA, a novel generation-based model that addresses both the large search space and the schema linking challenges in a unified framework with two mutually boosting ingredients: dynamic program induction for tackling the large search space and dynamic contextualized encoding for schema linking. Experimental results on multiple popular KBQA datasets demonstrate the highly competitive performance of ArcaneQA in both effectiveness and efficiency.

Yu Gu, Xiang Deng, Yu Su · microsoft-research

A key missing capacity of current language models (LMs) is grounding to real-world environments. Most existing work for grounded language understanding uses LMs to directly generate plans that can be executed in the environment to achieve the desired effects. It thereby casts the burden of ensuring grammaticality, faithfulness, and controllability all on the LMs. We propose Pangu, a generic framework for grounded language understanding that capitalizes on the discriminative ability of LMs instead of their generative ability. Pangu consists of a symbolic agent and a neural LM working in a concerted fashion: The agent explores the environment to incrementally construct valid plans, and the LM evaluates the plausibility of the candidate plans to guide the search process. A case study on the challenging problem of knowledge base question answering (KBQA), which features a massive environment, demonstrates the remarkable effectiveness and flexibility of Pangu: A BERT-base LM is sufficient for setting a new record on standard KBQA datasets, and larger LMs further bring substantial gains. Pangu also enables, for the first time, effective few-shot in-context learning for KBQA with large LMs such as Codex.

Cliff Wong, Sheng Zhang, Yu Gu et al. · cambridge, microsoft-research

Clinical trial matching is a key process in health delivery and discovery. In practice, it is plagued by overwhelming unstructured data and unscalable manual processing. In this paper, we conduct a systematic study on scaling clinical trial matching using large language models (LLMs), with oncology as the focus area. Our study is grounded in a clinical trial matching system currently in test deployment at a large U.S. health network. Initial findings are promising: out of box, cutting-edge LLMs, such as GPT-4, can already structure elaborate eligibility criteria of clinical trials and extract complex matching logic (e.g., nested AND/OR/NOT). While still far from perfect, LLMs substantially outperform prior strong baselines and may serve as a preliminary solution to help triage patient-trial candidates with humans in the loop. Our study also reveals a few significant growth areas for applying LLMs to end-to-end clinical trial matching, such as context limitation and accuracy, especially in structuring patient information from longitudinal medical records.

Yu Gu, Jianwei Yang, Naoto Usuyama et al. · microsoft-research

Rapid progress has been made in instruction-learning for image editing with natural-language instruction, as exemplified by InstructPix2Pix. In biomedicine, such methods can be applied to counterfactual image generation, which helps differentiate causal structure from spurious correlation and facilitate robust image interpretation for disease progression modeling. However, generic image-editing models are ill-suited for the biomedical domain, and counterfactual biomedical image generation is largely underexplored. In this paper, we present BiomedJourney, a novel method for counterfactual biomedical image generation by instruction-learning from multimodal patient journeys. Given a patient with two biomedical images taken at different time points, we use GPT-4 to process the corresponding imaging reports and generate a natural language description of disease progression. The resulting triples (prior image, progression description, new image) are then used to train a latent diffusion model for counterfactual biomedical image generation. Given the relative scarcity of image time series data, we introduce a two-stage curriculum that first pretrains the denoising network using the much more abundant single image-report pairs (with dummy prior image), and then continues training using the counterfactual triples. Experiments using the standard MIMIC-CXR dataset demonstrate the promise of our method. In a comprehensive battery of tests on counterfactual medical image generation, BiomedJourney substantially outperforms prior state-of-the-art methods in instruction image editing and medical image generation such as InstructPix2Pix and RoentGen. To facilitate future study in counterfactual medical generation, we plan to release our instruction-learning code and pretrained models.

Zhenghao Liu, Sen Mei, Chenyan Xiong et al.

This paper proposes Text mAtching based SequenTial rEcommendation model (TASTE), which maps items and users in an embedding space and recommends items by matching their text representations. TASTE verbalizes items and user-item interactions using identifiers and attributes of items. To better characterize user behaviors, TASTE additionally proposes an attention sparsity method, which enables TASTE to model longer user-item interactions by reducing the self-attention computations during encoding. Our experiments show that TASTE outperforms the state-of-the-art methods on widely used sequential recommendation datasets. TASTE alleviates the cold start problem by representing long-tail items using full-text modeling and bringing the benefits of pretrained language models to recommendation systems. Our further analyses illustrate that TASTE significantly improves the recommendation accuracy by reducing the popularity bias of previous item id based recommendation models and returning more appropriate and text-relevant items to satisfy users. All codes are available at https://github.com/OpenMatch/TASTE.

Yu Gu, Sheng Zhang, Naoto Usuyama et al. · cambridge, microsoft-research

Large language models (LLMs), such as GPT-4, have demonstrated remarkable capabilities across a wide range of tasks, including health applications. In this paper, we study how LLMs can be used to scale biomedical knowledge curation. We find that while LLMs already possess decent competency in structuring biomedical text, by distillation into a task-specific student model through self-supervised learning, substantial gains can be attained over out-of-box LLMs, with additional advantages such as cost, efficiency, and white-box model access. We conduct a case study on adverse drug event (ADE) extraction, which is an important area for improving care. On standard ADE extraction evaluation, a GPT-3.5 distilled PubMedBERT model attained comparable accuracy as supervised state-of-the-art models without using any labeled data. Despite being over 1,000 times smaller, the distilled model outperformed its teacher GPT-3.5 by over 6 absolute points in F1 and GPT-4 by over 5 absolute points. Ablation studies on distillation model choice (e.g., PubMedBERT vs BioGPT) and ADE extraction architecture shed light on best practice for biomedical knowledge extraction. Similar gains were attained by distillation for other standard biomedical knowledge extraction tasks such as gene-disease associations and protected health information, further illustrating the promise of this approach.

Yu Gu, Vardaan Pahuja, Gong Cheng et al. · microsoft-research

Recent advances in deep learning have greatly propelled the research on semantic parsing. Improvement has since been made in many downstream tasks, including natural language interface to web APIs, text-to-SQL generation, among others. However, despite the close connection shared with these tasks, research on question answering over knowledge bases (KBQA) has comparatively been progressing slowly. We identify and attribute this to two unique challenges of KBQA, schema-level complexity and fact-level complexity. In this survey, we situate KBQA in the broader literature of semantic parsing and give a comprehensive account of how existing KBQA approaches attempt to address the unique challenges. Regardless of the unique challenges, we argue that we can still take much inspiration from the literature of semantic parsing, which has been overlooked by existing research on KBQA. Based on our discussion, we can better understand the bottleneck of current KBQA research and shed light on promising directions for KBQA to keep up with the literature of semantic parsing, particularly in the era of pre-trained language models.

Zhenyu Li, Sunqi Fan, Yu Gu et al.

Knowledge base question answering (KBQA) is a critical yet challenging task due to the vast number of entities within knowledge bases and the diversity of natural language questions posed by users. Unfortunately, the performance of most KBQA models tends to decline significantly in real-world scenarios where high-quality annotated data is insufficient. To mitigate the burden associated with manual annotation, we introduce FlexKBQA by utilizing Large Language Models (LLMs) as program translators for addressing the challenges inherent in the few-shot KBQA task. Specifically, FlexKBQA leverages automated algorithms to sample diverse programs, such as SPARQL queries, from the knowledge base, which are subsequently converted into natural language questions via LLMs. This synthetic dataset facilitates training a specialized lightweight model for the KB. Additionally, to reduce the barriers of distribution shift between synthetic data and real user questions, FlexKBQA introduces an executionguided self-training method to iterative leverage unlabeled user questions. Furthermore, we explore harnessing the inherent reasoning capability of LLMs to enhance the entire framework. Consequently, FlexKBQA delivers substantial flexibility, encompassing data annotation, deployment, and being domain agnostic. Through extensive experiments on GrailQA, WebQSP, and KQA Pro, we observe that under the few-shot even the more challenging zero-shot scenarios, FlexKBQA achieves impressive results with a few annotations, surpassing all previous baselines and even approaching the performance of supervised models, achieving a remarkable 93% performance relative to the fully-supervised models. We posit that FlexKBQA represents a significant advancement towards exploring better integration of large and lightweight models. The code is open-sourced.

Yumeng Song, Yu Gu, Tianyi Li et al.

Hypergraphs can model higher-order relationships among data objects that are found in applications such as social networks and bioinformatics. However, recent studies on hypergraph learning that extend graph convolutional networks to hypergraphs cannot learn effectively from features of unlabeled data. To such learning, we propose a contrastive hypergraph neural network, CHGNN, that exploits self-supervised contrastive learning techniques to learn from labeled and unlabeled data. First, CHGNN includes an adaptive hypergraph view generator that adopts an auto-augmentation strategy and learns a perturbed probability distribution of minimal sufficient views. Second, CHGNN encompasses an improved hypergraph encoder that considers hyperedge homogeneity to fuse information effectively. Third, CHGNN is equipped with a joint loss function that combines a similarity loss for the view generator, a node classification loss, and a hyperedge homogeneity loss to inject supervision signals. It also includes basic and cross-validation contrastive losses, associated with an enhanced contrastive loss training process. Experimental results on nine real datasets offer insight into the effectiveness of CHGNN, showing that it outperforms 13 competitors in terms of classification accuracy consistently.

Qianchu Liu, Sheng Zhang, Guanghui Qin et al. · microsoft-research

Frontier models have demonstrated remarkable capabilities in understanding and reasoning with natural-language text, but they still exhibit major competency gaps in multimodal understanding and reasoning especially in high-value verticals such as biomedicine. Medical imaging report generation is a prominent example. Supervised fine-tuning can substantially improve performance, but they are prone to overfitting to superficial boilerplate patterns. In this paper, we introduce Universal Report Generation (UniRG) as a general framework for medical imaging report generation. By leveraging reinforcement learning as a unifying mechanism to directly optimize for evaluation metrics designed for end applications, UniRG can significantly improve upon supervised fine-tuning and attain durable generalization across diverse institutions and clinical practices. We trained UniRG-CXR on publicly available chest X-ray (CXR) data and conducted a thorough evaluation in CXR report generation with rigorous evaluation scenarios. On the authoritative ReXrank benchmark, UniRG-CXR sets new overall SOTA, outperforming prior state of the art by a wide margin.

Haidong Xin, Xinze Li, Zhenghao Liu et al.

Existing memory systems enable Large Language Models (LLMs) to support long-horizon human-LLM interactions by persisting historical interactions beyond limited context windows. However, while recent approaches have succeeded in constructing effective memories, they often disrupt the inherent logical and temporal relationships within interaction sessions, resulting in fragmented memory units and degraded reasoning performance. In this paper, we propose MetaMem, a novel framework that augments memory systems with a self-evolving meta-memory, aiming to teach LLMs how to effectively utilize memorized knowledge. During meta-memory optimization, MetaMem iteratively distills transferable knowledge utilization experiences across different tasks by self-reflecting on reasoning processes and performing actions to update the current meta-memory state. The accumulated meta-memory units serve as explicit knowledge utilization experiences, guiding the LLM to systematically identify and integrate critical evidence from scattered memory fragments. Extensive experiments demonstrate the effectiveness of MetaMem, which significantly outperforms strong baselines by over 3.6%. All codes and datasets are available at https://github.com/OpenBMB/MetaMem.

Yifan Ji, Zhipeng Xu, Zhenghao Liu et al.

Key Information Extraction (KIE) from real-world documents remains challenging due to substantial variations in layout structures, visual quality, and task-specific information requirements. Recent Large Multimodal Models (LMMs) have shown promising potential for performing end-to-end KIE directly from document images. To enable a comprehensive and systematic evaluation across realistic and diverse application scenarios, we introduce UNIKIE-BENCH, a unified benchmark designed to rigorously evaluate the KIE capabilities of LMMs. UNIKIE-BENCH consists of two complementary tracks: a constrained-category KIE track with scenario-predefined schemas that reflect practical application needs, and an open-category KIE track that extracts any key information that is explicitly present in the document. Experiments on 15 state-of-the-art LMMs reveal substantial performance degradation under diverse schema definitions, long-tail key fields, and complex layouts, along with pronounced performance disparities across different document types and scenarios. These findings underscore persistent challenges in grounding accuracy and layout-aware reasoning for LMM-based KIE. All codes and datasets are available at https://github.com/NEUIR/UNIKIE-BENCH.

Weiqing Yang, Hanbin Wang, Zhenghao Liu et al.

Code debugging is a vital stage of software development, essential for ensuring the reliability and performance of Large Language Models (LLMs) in the code generation task. Human debugging typically follows a multi-stage process, which includes Bug Localization, Bug Identification, Code Repair, and Code Recognition. However, existing code debugging benchmarks predominantly focus on the Code Repair stage, which offers only a limited perspective on evaluating the debugging capabilities of LLMs. In this paper, we introduce DEBUGEVAL, a comprehensive benchmark for evaluating the debugging abilities of LLMs by emulating the multi-stage human debugging process. Through evaluating on DEBUGEVAL, we observe that 7B-scale models consistently underperform compared to their larger counterparts, highlighting their limitations in comprehending code semantics. In this case, we propose the COmmunicative Agent-based data SynThesis (COAST) framework, which employs a multi-agent system to generate high-quality training data for supervised fine-tuning (SFT). Experimental results demonstrate that COAST-generated data outperform human-curated and GPT-4-generated data, enabling 7B-scale LLMs to achieve debugging performance comparable to GPT-3.5. All data and codes are available at https://github.com/NEUIR/COAST.

Zixian Huang, Ao Wu, Jiaying Zhou et al.

A trending paradigm for multiple-choice question answering (MCQA) is using a text-to-text framework. By unifying data in different tasks into a single text-to-text format, it trains a generative encoder-decoder model which is both powerful and universal. However, a side effect of twisting a generation target to fit the classification nature of MCQA is the under-utilization of the decoder and the knowledge that can be decoded. To exploit the generation capability and underlying knowledge of a pre-trained encoder-decoder model, in this paper, we propose a generation-enhanced MCQA model named GenMC. It generates a clue from the question and then leverages the clue to enhance a reader for MCQA. It outperforms text-to-text models on multiple MCQA datasets.

Marcela Mera-Trujillo, Shivang Patel, Yu Gu et al.

Keypoint detection and matching is a fundamental task in many computer vision problems, from shape reconstruction, to structure from motion, to AR/VR applications and robotics. It is a well-studied problem with remarkable successes such as SIFT, and more recent deep learning approaches. While great robustness is exhibited by these techniques with respect to noise, illumination variation, and rigid motion transformations, less attention has been placed on image distortion sensitivity. In this work, we focus on the case when this is caused by the geometry of the cameras used for image acquisition, and consider the keypoint detection and matching problem between the hybrid scenario of a fisheye and a projective image. We build on a state-of-the-art approach and derive a self-supervised procedure that enables training an interest point detector and descriptor network. We also collected two new datasets for additional training and testing in this unexplored scenario, and we demonstrate that current approaches are suboptimal because they are designed to work in traditional projective conditions, while the proposed approach turns out to be the most effective.

Zhenghao Liu, Zhuoyang Wu, Xinze Li et al.

Large Language Models (LLMs) have demonstrated remarkable reasoning capabilities, particularly in solving complex mathematical problems. Recent studies show that distilling long reasoning trajectories can effectively enhance the reasoning performance of small-scale student models. However, teacher-generated reasoning trajectories are often excessively long and structurally complex, making them difficult for student models to learn. This mismatch leads to a gap between the provided supervision signal and the learning capacity of the student model. To address this challenge, we propose Prefix-ALIGNment distillation (P-ALIGN), a framework that fully exploits teacher CoTs for distillation through adaptive prefix alignment. Specifically, P-ALIGN adaptively truncates teacher-generated reasoning trajectories by determining whether the remaining suffix is concise and sufficient to guide the student model. Then, P-ALIGN leverages the teacher-generated prefix to supervise the student model, encouraging effective prefix alignment. Experiments on multiple mathematical reasoning benchmarks demonstrate that P-ALIGN outperforms all baselines by over 3%. Further analysis indicates that the prefixes constructed by P-ALIGN provide more effective supervision signals, while avoiding the negative impact of redundant and uncertain reasoning components. All code is available at https://github.com/NEUIR/P-ALIGN.

Yuqi Xiong, Chunyi Peng, Zhipeng Xu et al.

Visual Retrieval-Augmented Generation (VRAG) enhances Vision-Language Models (VLMs) by incorporating external visual documents to address a given query. Existing VRAG frameworks usually depend on rigid, pre-defined external tools to extend the perceptual capabilities of VLMs, typically by explicitly separating visual perception from subsequent reasoning processes. However, this decoupled design can lead to unnecessary loss of visual information, particularly when image-based operations such as cropping are applied. In this paper, we propose Lang2Act, which enables fine-grained visual perception and reasoning through self-emergent linguistic toolchains. Rather than invoking fixed external engines, Lang2Act collects self-emergent actions as linguistic tools and leverages them to enhance the visual perception capabilities of VLMs. To support this mechanism, we design a two-stage Reinforcement Learning (RL)-based training framework. Specifically, the first stage optimizes VLMs to self-explore high-quality actions for constructing a reusable linguistic toolbox, and the second stage further optimizes VLMs to exploit these linguistic tools for downstream reasoning effectively. Experimental results demonstrate the effectiveness of Lang2Act in substantially enhancing the visual perception capabilities of VLMs, achieving performance improvements of over 4%. All code and data are available at https://github.com/NEUIR/Lang2Act.

Zhenghao Liu, Zulong Chen, Moufeng Zhang et al.

This paper proposes the User Viewing Flow Modeling (SINGLE) method for the article recommendation task, which models the user constant preference and instant interest from user-clicked articles. Specifically, we first employ a user constant viewing flow modeling method to summarize the user's general interest to recommend articles. In this case, we utilize Large Language Models (LLMs) to capture constant user preferences from previously clicked articles, such as skills and positions. Then we design the user instant viewing flow modeling method to build interactions between user-clicked article history and candidate articles. It attentively reads the representations of user-clicked articles and aims to learn the user's different interest views to match the candidate article. Our experimental results on the Alibaba Technology Association (ATA) website show the advantage of SINGLE, achieving a 2.4% improvement over previous baseline models in the online A/B test. Our further analyses illustrate that SINGLE has the ability to build a more tailored recommendation system by mimicking different article viewing behaviors of users and recommending more appropriate and diverse articles to match user interests.

Weipan Xu, Yu Gu, Yifan Chen et al.

Housing quality is an essential proxy for regional wealth, security and health. Understanding the distribution of housing quality is crucial for unveiling rural development status and providing political proposals. However,present rural house quality data highly depends on a top-down, time-consuming survey at the national or provincial level but fails to unpack the housing quality at the village level. To fill the gap between accurately depicting rural housing quality conditions and deficient data,we collect massive rural images and invite users to assess their housing quality at scale. Furthermore, a deep learning framework is proposed to automatically and efficiently predict housing quality based on crowd-sourcing rural images.

Yu Gu, Zijun Yu, Vahid Partovi Nia et al.

Chain-of-thought (CoT) reasoning with self-consistency improves performance by aggregating multiple sampled reasoning paths. In this setting, correctness is no longer tied to a single reasoning trace but to the aggregation rule over a pool of candidate paths, making aggregation uncertainty the central challenge. This issue is critical where confidently incorrect answers are far more costly than abstentions. We introduce a conformal procedure for CoT reasoning that directly addresses aggregation uncertainty. Our approach replaces majority voting with weighted score aggregation over reasoning paths and calibrates an abstention rule using conformal risk control. This approach leads to finite-sample guarantees on the confident-error rate--the probability that the system answers and is wrong. We further identify score separability as the key condition under which abstention provably improves selective accuracy, and derive closed-form expressions that predict accuracy gains from calibration data alone. The method is fully inference-time, and requires no retraining. Across four benchmarks, four open-source models, and three score classes, realized confident-error rates are consistent with the prescribed targets up to calibration-split and test-set variability. Our method achieves $90.1\%$ selective accuracy on GSM8K by abstaining on less than $5\%$ of problems, compared with $82\%$ accuracy under majority-voting baseline.

Reuben Tan, Baolin Peng, Zhengyuan Yang et al.

Agentic reasoning models trained with multimodal reinforcement learning (MMRL) have become increasingly capable, yet they are almost universally optimized using sparse, outcome-based rewards computed based on the final answers. Richer rewards computed from the reasoning tokens can improve learning significantly by providing more fine-grained guidance. However, it is challenging to compute more informative rewards in MMRL beyond those based on outcomes since different samples may require different scoring functions and teacher models may provide noisy reward signals too. In this paper, we introduce the Argos (Agentic Reward for Grounded & Objective Scoring), a principled reward agent to train multimodal reasoning models for agentic tasks. For each sample, Argos selects from a pool of teacher-model derived and rule-based scoring functions to simultaneously evaluate: (i) final response accuracy, (ii) spatiotemporal localization of referred entities and actions, and (iii) the quality of the reasoning process. We find that by leveraging our agentic verifier across both SFT data curation and RL training, our model achieves state-of-the-art results across multiple agentic tasks such as spatial reasoning, visual hallucination as well as robotics and embodied AI benchmarks. Critically, we demonstrate that just relying on SFT post-training on highly curated reasoning data is insufficient, as agents invariably collapse to ungrounded solutions during RL without our online verification. We also show that our agentic verifier can help to reduce reward-hacking in MMRL. Finally, we also provide a theoretical justification for the effectiveness of Argos through the concept of pareto-optimality.

Yong Zhao, Runxin He, Nicholas Kersting et al.

Understanding why a neural network model makes certain decisions can be as important as the inference performance. Various methods have been proposed to help practitioners explain the prediction of a neural network model, of which Shapley values are most popular. SHAP package is a leading implementation of Shapley values to explain neural networks implemented in TensorFlow or PyTorch but lacks cross-platform support, one-shot deployment and is highly inefficient. To address these problems, we present the ONNXExplainer, which is a generic framework to explain neural networks using Shapley values in the ONNX ecosystem. In ONNXExplainer, we develop its own automatic differentiation and optimization approach, which not only enables One-Shot Deployment of neural networks inference and explanations, but also significantly improves the efficiency to compute explanation with less memory consumption. For fair comparison purposes, we also implement the same optimization in TensorFlow and PyTorch and measure its performance against the current state of the art open-source counterpart, SHAP. Extensive benchmarks demonstrate that the proposed optimization approach improves the explanation latency of VGG19, ResNet50, DenseNet201, and EfficientNetB0 by as much as 500%.

Bernal Jiménez Gutiérrez, Yiheng Shu, Yu Gu et al. · microsoft-research

In order to thrive in hostile and ever-changing natural environments, mammalian brains evolved to store large amounts of knowledge about the world and continually integrate new information while avoiding catastrophic forgetting. Despite the impressive accomplishments, large language models (LLMs), even with retrieval-augmented generation (RAG), still struggle to efficiently and effectively integrate a large amount of new experiences after pre-training. In this work, we introduce HippoRAG, a novel retrieval framework inspired by the hippocampal indexing theory of human long-term memory to enable deeper and more efficient knowledge integration over new experiences. HippoRAG synergistically orchestrates LLMs, knowledge graphs, and the Personalized PageRank algorithm to mimic the different roles of neocortex and hippocampus in human memory. We compare HippoRAG with existing RAG methods on multi-hop question answering and show that our method outperforms the state-of-the-art methods remarkably, by up to 20%. Single-step retrieval with HippoRAG achieves comparable or better performance than iterative retrieval like IRCoT while being 10-30 times cheaper and 6-13 times faster, and integrating HippoRAG into IRCoT brings further substantial gains. Finally, we show that our method can tackle new types of scenarios that are out of reach of existing methods. Code and data are available at https://github.com/OSU-NLP-Group/HippoRAG.

Manjie Xu, Chenxing Li, Xinyi Tu et al.

Generating semantically and temporally aligned audio content in accordance with video input has become a focal point for researchers, particularly following the remarkable breakthrough in text-to-video generation. In this work, we aim to offer insights into the video-to-audio generation paradigm, focusing on three crucial aspects: vision encoders, auxiliary embeddings, and data augmentation techniques. Beginning with a foundational model built on a simple yet surprisingly effective intuition, we explore various vision encoders and auxiliary embeddings through ablation studies. Employing a comprehensive evaluation pipeline that emphasizes generation quality and video-audio synchronization alignment, we demonstrate that our model exhibits state-of-the-art video-to-audio generation capabilities. Furthermore, we provide critical insights into the impact of different data augmentation methods on enhancing the generation framework's overall capacity. We showcase possibilities to advance the challenge of generating synchronized audio from semantic and temporal perspectives. We hope these insights will serve as a stepping stone toward developing more realistic and accurate audio-visual generation models.

Hao Yuan, Yajiong Liu, Yanfeng Zhang et al.

Many Graph Neural Network (GNN) training systems have emerged recently to support efficient GNN training. Since GNNs embody complex data dependencies between training samples, the training of GNNs should address distinct challenges different from DNN training in data management, such as data partitioning, batch preparation for mini-batch training, and data transferring between CPUs and GPUs. These factors, which take up a large proportion of training time, make data management in GNN training more significant. This paper reviews GNN training from a data management perspective and provides a comprehensive analysis and evaluation of the representative approaches. We conduct extensive experiments on various benchmark datasets and show many interesting and valuable results. We also provide some practical tips learned from these experiments, which are helpful for designing GNN training systems in the future.

Xin Ai, Qiange Wang, Chunyu Cao et al.

Graph Neural Networks (GNNs) have demonstrated outstanding performance in various applications. Existing frameworks utilize CPU-GPU heterogeneous environments to train GNN models and integrate mini-batch and sampling techniques to overcome the GPU memory limitation. In CPU-GPU heterogeneous environments, we can divide sample-based GNN training into three steps: sample, gather, and train. Existing GNN systems use different task orchestrating methods to employ each step on CPU or GPU. After extensive experiments and analysis, we find that existing task orchestrating methods fail to fully utilize the heterogeneous resources, limited by inefficient CPU processing or GPU resource contention. In this paper, we propose NeutronOrch, a system for sample-based GNN training that incorporates a layer-based task orchestrating method and ensures balanced utilization of the CPU and GPU. NeutronOrch decouples the training process by layer and pushes down the training task of the bottom layer to the CPU. This significantly reduces the computational load and memory footprint of GPU training. To avoid inefficient CPU processing, NeutronOrch only offloads the training of frequently accessed vertices to the CPU and lets GPU reuse their embeddings with bounded staleness. Furthermore, NeutronOrch provides a fine-grained pipeline design for the layer-based task orchestrating method, fully overlapping different tasks on heterogeneous resources while strictly guaranteeing bounded staleness. The experimental results show that compared with the state-of-the-art GNN systems, NeutronOrch can achieve up to 11.51x performance speedup.

Juan Manuel Zambrano Chaves, Shih-Cheng Huang, Yanbo Xu et al. · microsoft-research

The scaling laws and extraordinary performance of large foundation models motivate the development and utilization of such models in biomedicine. However, despite early promising results on some biomedical benchmarks, there are still major challenges that need to be addressed before these models can be used in real-world clinics. Frontier general-domain models such as GPT-4V still have significant performance gaps in multimodal biomedical applications. More importantly, less-acknowledged pragmatic issues, including accessibility, model cost, and tedious manual evaluation make it hard for clinicians to use state-of-the-art large models directly on private patient data. Here, we explore training open-source small multimodal models (SMMs) to bridge competency gaps for unmet clinical needs in radiology. To maximize data efficiency, we adopt a modular approach by incorporating state-of-the-art pre-trained models for image and text modalities, and focusing on training a lightweight adapter to ground each modality to the text embedding space, as exemplified by LLaVA-Med. For training, we assemble a large dataset of over 697 thousand radiology image-text pairs. For evaluation, we propose CheXprompt, a GPT-4-based metric for factuality evaluation, and demonstrate its parity with expert evaluation. For best practice, we conduct a systematic ablation study on various choices in data engineering and multimodal training. The resulting LlaVA-Rad (7B) model attains state-of-the-art results on standard radiology tasks such as report generation and cross-modal retrieval, even outperforming much larger models such as GPT-4V and Med-PaLM M (84B). The inference of LlaVA-Rad is fast and can be performed on a single V100 GPU in private settings, offering a promising state-of-the-art tool for real-world clinical applications.

Qianchu Liu, Sheng Zhang, Guanghui Qin et al. · microsoft-research

Recent proprietary models (e.g., o3) have begun to demonstrate strong multimodal reasoning capabilities. Yet, most existing open-source research concentrates on training text-only reasoning models, with evaluations limited to mainly mathematical and general-domain tasks. Therefore, it remains unclear how to effectively extend reasoning capabilities beyond text input and general domains. This paper explores a fundamental research question: Is reasoning generalizable across modalities and domains? Our findings support an affirmative answer: General-domain text-based post-training can enable such strong generalizable reasoning. Leveraging this finding, we introduce X-Reasoner, a vision-language model post-trained solely on general-domain text for generalizable reasoning, using a two-stage approach: an initial supervised fine-tuning phase with distilled long chain-of-thoughts, followed by reinforcement learning with verifiable rewards. Experiments show that X-Reasoner successfully transfers reasoning capabilities to both multimodal and out-of-domain settings, outperforming existing state-of-the-art models trained with in-domain and multimodal data across various general and medical benchmarks (Figure 1). Additionally, we find that X-Reasoner's performance in specialized domains can be further enhanced through continued training on domain-specific text-only data. Building upon this, we introduce X-Reasoner-Med, a medical-specialized variant that achieves new state of the art on numerous text-only and multimodal medical benchmarks.

Yongyuan Liang, Shijie Zhou, Yu Gu et al.

Recent advances in multimodal agents have improved computer-use interaction and tool-usage, yet most existing systems remain reactive, optimizing actions in isolation without reasoning about future states or long-term goals. This limits planning coherence and prevents agents from reliably solving high-level, multi-step tasks. We introduce TraceR1, a two-stage reinforcement learning framework that explicitly trains anticipatory reasoning by forecasting short-horizon trajectories before execution. The first stage performs trajectory-level reinforcement learning with rewards that enforce global consistency across predicted action sequences. The second stage applies grounded reinforcement fine-tuning, using execution feedback from frozen tool agents to refine step-level accuracy and executability. TraceR1 is evaluated across seven benchmarks, covering online computer-use, offline computer-use benchmarks, and multimodal tool-use reasoning tasks, where it achieves substantial improvements in planning stability, execution robustness, and generalization over reactive and single-stage baselines. These results show that anticipatory trajectory reasoning is a key principle for building multimodal agents that can reason, plan, and act effectively in complex real-world environments.

Mingyan Wu, Zhenghao Liu, Yukun Yan et al.

Retrieval-Augmented Generation (RAG) enhances the performance of Large Language Models (LLMs) by incorporating external knowledge. However, LLMs still encounter challenges in effectively utilizing the knowledge from retrieved documents, often being misled by irrelevant or noisy information. To address this issue, we introduce RankCoT, a knowledge refinement method that incorporates reranking signals in generating CoT-based summarization for knowledge refinement based on given query and all retrieval documents. During training, RankCoT prompts the LLM to generate Chain-of-Thought (CoT) candidates based on the query and individual documents. It then fine-tunes the LLM to directly reproduce the best CoT from these candidate outputs based on all retrieved documents, which requires LLM to filter out irrelevant documents during generating CoT-style summarization. Additionally, RankCoT incorporates a self-reflection mechanism that further refines the CoT outputs, resulting in higher-quality training data. Our experiments demonstrate the effectiveness of RankCoT, showing its superior performance over other knowledge refinement models. Further analysis reveals that RankCoT can provide shorter but effective refinement results, enabling the generator to produce more accurate answers. All code and data are available at https://github.com/NEUIR/RankCoT.

Zhenghao Liu, Haolan Wang, Xinze Li et al.

Tabular data contains rich structural semantics and plays a crucial role in organizing and manipulating information. To better capture these structural semantics, this paper introduces the HybrId-modal Preference oPtimizatiOn (HIPPO) model, which represents tables using both text and image, and optimizes MLLMs to effectively learn more comprehensive table information from these multiple modalities. Specifically, HIPPO samples model responses from hybrid-modal table representations and designs a modality-consistent sampling strategy to enhance response diversity and mitigate modality bias during DPO training. Experimental results on table question answering and table fact verification tasks demonstrate the effectiveness of HIPPO, achieving a 4% improvement over various table reasoning models. Further analysis reveals that HIPPO not only enhances reasoning abilities based on unimodal table representations but also facilitates the extraction of crucial and distinct semantics from different modal representations. All data and codes are available at https://github.com/NEUIR/HIPPO.

Hao Yang, Yifan Ji, Zhipeng Xu et al.

Visual document retrieval aims to retrieve a set of document pages relevant to a query from visually rich collections. Existing methods often employ Vision-Language Models (VLMs) to encode queries and visual pages into a shared embedding space, which is then optimized via contrastive training. However, during visual document representation, localized evidence is usually scattered across complex document layouts, making it difficult for retrieval models to capture crucial cues for effective embedding learning. In this paper, we propose Reasoning-Guided Alignment (ReAlign), a method that enhances visual document retrieval by leveraging the reasoning capability of VLMs to provide fine-grained visual document descriptions as supervision signals for training. Specifically, ReAlign employs a superior VLM to identify query-related regions on a page and then generates a query-aware description grounding the cropped visual regions. The retriever is then trained using these region-focused descriptions to align the semantics between queries and visual documents by encouraging the document ranking distribution induced by the region-focused descriptions to match that induced by the original query. Experiments on diverse visually rich document retrieval benchmarks demonstrate that ReAlign consistently improves visual document retrieval performance on both in-domain and out-of-domain datasets, achieving up to 2% relative improvements. Moreover, the advantages of ReAlign generalize across different VLM backbones by guiding models to better focus their attention on critical visual cues for document representation. All code and datasets are available at https://github.com/NEUIR/ReAlign.

Shaohua Duan, Xinze Li, Zhenghao Liu et al.

Long-context modeling is critical for a wide range of real-world tasks, including long-context question answering, summarization, and complex reasoning tasks. Recent studies have explored fine-tuning Large Language Models (LLMs) with synthetic data to enhance their long-context capabilities. However, the effectiveness of such approaches is often limited by the low diversity and factual inconsistencies in the generated data. To address these challenges, we propose LongMab-PO, a novel framework that leverages a Multi-Armed Bandit (MAB) rollout strategy to identify the most informative chunks from the given long context for sampling high-quality and diverse responses and constructing preference data pairs for Direct Preference Optimization (DPO) training. Specifically, we treat context chunks as arms of MAB, select chunks based on their expected reward scores to input into LLMs to generate responses, and iteratively update these scores based on reward feedback. This exploration and exploitation process enables the model to focus on the most relevant context segments, thereby generating and collecting high-quality and diverse responses. Finally, we collect these generated responses from the rollout process and apply the DPO method to further optimize the LLM. Experimental results show that LongMab-PO significantly improves the diversity and quality of preference data pairs, achieving state-of-the-art performance on long-context reasoning benchmarks. All code and data will be released on https://github.com/NEUIR/LongMab-PO.

Sijia Yao, Pengcheng Huang, Zhenghao Liu et al.

Large language models (LLMs) have demonstrated significant potential in enhancing dense retrieval through query augmentation. However, most existing methods treat the LLM and the retriever as separate modules, overlooking the alignment between generation and ranking objectives. In this work, we propose ExpandR, a unified LLM-augmented dense retrieval framework that jointly optimizes both the LLM and the retriever. ExpandR employs the LLM to generate semantically rich query expansions, which are leveraged to enhance the retriever's training. Simultaneously, the LLM is trained using Direct Preference Optimization (DPO), guided by a carefully designed reward function that balances retrieval effectiveness and generation consistency. This joint optimization paradigm enables mutual adaptation between the LLM and the retriever, resulting in query expansions that are both informative and well-suited for retrieval. Experimental results on multiple benchmarks show that ExpandR consistently outperforms strong baselines, achieving more than a 5% improvement in retrieval performance. All codes are available at https://github.com/NEUIR/ExpandR.

Boming Chen, Zining Wang, Zhentao Guo et al.

Table structure recognition (TSR) holds widespread practical importance by parsing tabular images into structured representations, yet encounters significant challenges when processing complex layouts involving merged or empty cells. Traditional visual-centric models rely exclusively on visual information while lacking crucial semantic support, thereby impeding accurate structural recognition in complex scenarios. Vision-language models leverage contextual semantics to enhance comprehension; however, these approaches underemphasize the modeling of visual structural information. To address these limitations, this paper introduces InstructTable, an instruction-guided multi-stage training TSR framework. Meticulously designed table instruction pre-training directs attention toward fine-grained structural patterns, enhancing comprehension of complex tables. Complementary TSR fine-tuning preserves robust visual information modeling, maintaining high-precision table parsing across diverse scenarios. Furthermore, we introduce Table Mix Expand (TME), an innovative template-free method for synthesizing large-scale authentic tabular data. Leveraging TME, we construct the Balanced Complex Dense Synthetic Tables (BCDSTab) benchmark, comprising 900 complex table images synthesized through our method to serve as a rigorous benchmark. Extensive experiments on multiple public datasets (FinTabNet, PubTabNet, MUSTARD) and BCDSTab demonstrate that InstructTable achieves state-of-the-art performance in TSR tasks. Ablation studies further confirm the positive impact of the proposed tabular-data-specific instructions and synthetic data.

Heng Rao, Yu Gu, Jason Zipeng Zhang et al.

Biological oscillations are periodic changes in various signaling processes crucial for the proper functioning of living organisms. These oscillations are modeled by ordinary differential equations, with coefficient variations leading to diverse periodic behaviors, typically measured by oscillatory frequencies. This paper explores sampling techniques for neural networks to model the relationship between system coefficients and oscillatory frequency. However, the scarcity of oscillations in the vast coefficient space results in many samples exhibiting non-periodic behaviors, and small coefficient changes near oscillation boundaries can significantly alter oscillatory properties. This leads to non-oscillatory bias and boundary sensitivity, making accurate predictions difficult. While existing importance and uncertainty sampling approaches partially mitigate these challenges, they either fail to resolve the sensitivity problem or result in redundant sampling. To address these limitations, we propose the Hierarchical Gradient-based Genetic Sampling (HGGS) framework, which improves the accuracy of neural network predictions for biological oscillations. The first layer, Gradient-based Filtering, extracts sensitive oscillation boundaries and removes redundant non-oscillatory samples, creating a balanced coarse dataset. The second layer, Multigrid Genetic Sampling, utilizes residual information to refine these boundaries and explore new high-residual regions, increasing data diversity for model training. Experimental results demonstrate that HGGS outperforms seven comparative sampling methods across four biological systems, highlighting its effectiveness in enhancing sampling and prediction accuracy.

Xin Dai, Pengcheng Huang, Zhenghao Liu et al.

Masked diffusion models (MDMs), which leverage bidirectional attention and a denoising process, are narrowing the performance gap with autoregressive models (ARMs). However, their internal attention mechanisms remain under-explored. This paper investigates the attention behaviors in MDMs, revealing the phenomenon of Attention Floating. Unlike ARMs, where attention converges to a fixed sink, MDMs exhibit dynamic, dispersed attention anchors that shift across denoising steps and layers. Further analysis reveals its Shallow Structure-Aware, Deep Content-Focused attention mechanism: shallow layers utilize floating tokens to build a global structural framework, while deeper layers allocate more capability toward capturing semantic content. Empirically, this distinctive attention pattern provides a mechanistic explanation for the strong in-context learning capabilities of MDMs, allowing them to double the performance compared to ARMs in knowledge-intensive tasks. All codes and datasets are available at https://github.com/NEUIR/Attention-Floating.

Xingjie Gao, Pengcheng Huang, Zhenghao Liu et al.

Equipping Large Language Models (LLMs) with external tools enables them to solve complex real-world problems. However, the robustness of existing methods remains a critical challenge when confronting novel or evolving tools. Existing trajectory-centric paradigms primarily rely on memorizing static solution paths during training, which limits the ability of LLMs to generalize tool usage to newly introduced or previously unseen tools. In this paper, we propose ToolMaster, a framework that shifts tool use from imitating golden tool-calling trajectories to actively learning tool usage through interaction with the environment. To optimize LLMs for tool planning and invocation, ToolMaster adopts a trial-and-execution paradigm, which trains LLMs to first imitate teacher-generated trajectories containing explicit tool trials and self-correction, followed by reinforcement learning to coordinate the trial and execution phases jointly. This process enables agents to autonomously explore correct tool usage by actively interacting with environments and forming experiential knowledge that benefits tool execution. Experimental results demonstrate that ToolMaster significantly outperforms existing baselines in terms of generalization and robustness across unseen or unfamiliar tools. All code and data are available at https://github.com/NEUIR/ToolMaster.

Theodore Zhao, Yu Gu, Jianwei Yang et al.

Biomedical image analysis is fundamental for biomedical discovery in cell biology, pathology, radiology, and many other biomedical domains. Holistic image analysis comprises interdependent subtasks such as segmentation, detection, and recognition of relevant objects. Here, we propose BiomedParse, a biomedical foundation model for imaging parsing that can jointly conduct segmentation, detection, and recognition for 82 object types across 9 imaging modalities. Through joint learning, we can improve accuracy for individual tasks and enable novel applications such as segmenting all relevant objects in an image through a text prompt, rather than requiring users to laboriously specify the bounding box for each object. We leveraged readily available natural-language labels or descriptions accompanying those datasets and use GPT-4 to harmonize the noisy, unstructured text information with established biomedical object ontologies. We created a large dataset comprising over six million triples of image, segmentation mask, and textual description. On image segmentation, we showed that BiomedParse is broadly applicable, outperforming state-of-the-art methods on 102,855 test image-mask-label triples across 9 imaging modalities (everything). On object detection, which aims to locate a specific object of interest, BiomedParse again attained state-of-the-art performance, especially on objects with irregular shapes (everywhere). On object recognition, which aims to identify all objects in a given image along with their semantic types, we showed that BiomedParse can simultaneously segment and label all biomedical objects in an image (all at once). In summary, BiomedParse is an all-in-one tool for biomedical image analysis by jointly solving segmentation, detection, and recognition for all major biomedical image modalities, paving the path for efficient and accurate image-based biomedical discovery.

Shuliang Liu, Zhipeng Xu, Zhenghao Liu et al.

Large Language Models (LLMs) as automatic evaluators, commonly referred to as LLM-as-a-Judge, have also attracted growing attention. This approach plays a vital role in aligning LLMs with human judgments, providing accurate and reliable assessments. However, LLM-based judgment models often exhibit judgment preference bias during the evaluation phase, tending to favor responses generated by themselves, undermining the reliability of their judgments. This paper introduces the Group-Based Polling Optimization (Genii), an unsupervised multi-agent collaborative optimization framework that mitigates the inherent judgment preference bias of judgment models. Specifically, Genii integrates various LLM-based judgment models into a multi-agent system and simulates the interactive client-server polling mechanism to optimize each client agent unsupervisedly. Our experiments demonstrate that Genii outperforms supervised models trained on annotated judgment data, while requiring no human-labeled annotations. Genii consistently improves performance across different client agents during the polling, even when weaker models act as server agents. Further analysis reveals that Genii effectively mitigates judgment preference bias of LLM-based judgment models, demonstrating its effectiveness. All codes are available at https://github.com/NEUIR/Genii.

Zhuoyang Wu, Xinze Li, Zhenghao Liu et al.

Large Language Models (LLMs) have exhibited strong reasoning capabilities and achieved remarkable performance in mathematical problem-solving tasks. Recently, distilling reasoning ability from long-form Chains-of-Thought (CoTs) has emerged as a promising approach for enhancing Small Language Models (SLMs). Existing studies typically treat SLMs as student models and use long-form CoTs as supervision signals for Supervised Fine-Tuning (SFT) to transfer reasoning ability. However, such long-form CoT teachers are usually unaware of the student model's capacity, which limits the effective utilization of the provided reasoning traces. To overcome this limitation, we propose errOr-aware self-ReflectION (ORION), a framework that refines teacher CoTs through an Error-Aware Reflection process. ORION enables the student model to construct more tailored teacher CoTs by refining teacher CoTs and incorporating its own reasoning errors. Experiments on multiple mathematical reasoning benchmarks demonstrate that ORION consistently improves performance by more than 2% over all baselines. Further analysis reveals that the CoTs constructed by ORION exhibit higher coherence and logical consistency, thereby serving as more effective supervision signals for SFT. All codes are available at https://github.com/NEUIR/ORION.git.

Ram Zaveri, Shivang Patel, Yu Gu et al.

Efficient visual trackers overfit to their training distributions and lack generalization abilities, resulting in them performing well on their respective in-distribution (ID) test sets and not as well on out-of-distribution (OOD) sequences, imposing limitations to their deployment in-the-wild under constrained resources. We introduce SiamABC, a highly efficient Siamese tracker that significantly improves tracking performance, even on OOD sequences. SiamABC takes advantage of new architectural designs in the way it bridges the dynamic variability of the target, and of new losses for training. Also, it directly addresses OOD tracking generalization by including a fast backward-free dynamic test-time adaptation method that continuously adapts the model according to the dynamic visual changes of the target. Our extensive experiments suggest that SiamABC shows remarkable performance gains in OOD sets while maintaining accurate performance on the ID benchmarks. SiamABC outperforms MixFormerV2-S by 7.6\% on the OOD AVisT benchmark while being 3x faster (100 FPS) on a CPU. Our code and models are available at https://wvuvl.github.io/SiamABC/.