Joseph James

Joseph James

Human annotation remains the foundation of reliable and interpretable data in Natural Language Processing (NLP). As annotation and evaluation tasks continue to expand, from categorical labelling to segmentation, subjective judgment, and continuous rating, measuring agreement between annotators has become increasingly more complex. This paper outlines how inter-annotator agreement (IAA) has been conceptualised and applied across NLP and related disciplines, describing the assumptions and limitations of common approaches. We organise agreement measures by task type and discuss how factors such as label imbalance and missing data influence reliability estimates. In addition, we highlight best practices for clear and transparent reporting, including the use of confidence intervals and the analysis of disagreement patterns. The paper aims to serve as a guide for selecting and interpreting agreement measures, promoting more consistent and reproducible human annotation and evaluation in NLP.

William Thorne, Joseph James, Yang Wang et al.

As AI-assisted grant proposals outpace manual review capacity in a kind of ``Malthusian trap'' for the research ecosystem, this paper investigates the capabilities and limitations of LLM-based grant reviewing for high-stakes evaluation. Using six EPSRC proposals, we develop a perturbation-based framework probing LLM sensitivity across six quality axes: funding, timeline, competency, alignment, clarity, and impact. We compare three review architectures: single-pass review, section-by-section analysis, and a 'Council of Personas' ensemble emulating expert panels. The section-level approach significantly outperforms alternatives in both detection rate and scoring reliability, while the computationally expensive council method performs no better than baseline. Detection varies substantially by perturbation type, with alignment issues readily identified but clarity flaws largely missed by all systems. Human evaluation shows LLM feedback is largely valid but skewed toward compliance checking over holistic assessment. We conclude that current LLMs may provide supplementary value within EPSRC review but exhibit high variability and misaligned review priorities. We release our code and any non-protected data.

Joseph James, Chenghao Xiao, Yucheng Li et al.

Scientific rigour tends to be sidelined in favour of bold statements, leading authors to overstate claims beyond what their results support. We present RIGOURATE, a two-stage multimodal framework that retrieves supporting evidence from a paper's body and assigns each claim an overstatement score. The framework consists of a dataset of over 10K claim-evidence sets from ICLR and NeurIPS papers, annotated using eight LLMs, with overstatement scores calibrated using peer-review comments and validated through human evaluation. It employes a fine-tuned reranker for evidence retrieval and a fine-tuned model to predict overstatement scores with justification. Compared to strong baselines, RIGOURATE enables improved evidence retrieval and overstatement detection. Overall, our work operationalises evidential proportionality and supports clearer, more transparent scientific communication.

Tyler Loakman, Joseph James, Chenghua Lin

With the rise of Large Language Models (LLMs) and their vision-enabled counterparts (VLMs), numerous works have investigated their capabilities in tasks that fuse the modalities of vision and language. In this work, we benchmark the extent to which VLMs are able to act as highly-trained phoneticians, interpreting spectrograms and waveforms of speech. To do this, we synthesise a novel dataset containing 4k+ English words spoken in isolation alongside stylistically consistent spectrogram and waveform figures. We test the ability of VLMs to understand these representations of speech through a multiple-choice task whereby models must predict the correct phonemic or graphemic transcription of a spoken word when presented amongst 3 distractor transcriptions that have been selected based on their phonemic edit distance to the ground truth. We observe that both zero-shot and finetuned models rarely perform above chance, demonstrating the requirement for specific parametric knowledge of how to interpret such figures, rather than paired samples alone.

Jian Yang, Xianglong Liu, Weifeng Lv et al.

Large language models (LLMs) have fundamentally transformed automated software development by enabling direct translation of natural language descriptions into functional code, driving commercial adoption through tools like Github Copilot (Microsoft), Cursor (Anysphere), Trae (ByteDance), and Claude Code (Anthropic). While the field has evolved dramatically from rule-based systems to Transformer-based architectures, achieving performance improvements from single-digit to over 95\% success rates on benchmarks like HumanEval. In this work, we provide a comprehensive synthesis and practical guide (a series of analytic and probing experiments) about code LLMs, systematically examining the complete model life cycle from data curation to post-training through advanced prompting paradigms, code pre-training, supervised fine-tuning, reinforcement learning, and autonomous coding agents. We analyze the code capability of the general LLMs (GPT-4, Claude, LLaMA) and code-specialized LLMs (StarCoder, Code LLaMA, DeepSeek-Coder, and QwenCoder), critically examining the techniques, design decisions, and trade-offs. Further, we articulate the research-practice gap between academic research (e.g., benchmarks and tasks) and real-world deployment (e.g., software-related code tasks), including code correctness, security, contextual awareness of large codebases, and integration with development workflows, and map promising research directions to practical needs. Last, we conduct a series of experiments to provide a comprehensive analysis of code pre-training, supervised fine-tuning, and reinforcement learning, covering scaling law, framework selection, hyperparameter sensitivity, model architectures, and dataset comparisons.