Xi Yang

Cheng Peng, Xi Yang, Kaleb E Smith et al.

Objective To develop soft prompt-based learning algorithms for large language models (LLMs), examine the shape of prompts, prompt-tuning using frozen/unfrozen LLMs, transfer learning, and few-shot learning abilities. Methods We developed a soft prompt-based LLM model and compared 4 training strategies including (1) fine-tuning without prompts; (2) hard-prompt with unfrozen LLMs; (3) soft-prompt with unfrozen LLMs; and (4) soft-prompt with frozen LLMs. We evaluated 7 pretrained LLMs using the 4 training strategies for clinical concept and relation extraction on two benchmark datasets. We evaluated the transfer learning ability of the prompt-based learning algorithms in a cross-institution setting. We also assessed the few-shot learning ability. Results and Conclusion When LLMs are unfrozen, GatorTron-3.9B with soft prompting achieves the best strict F1-scores of 0.9118 and 0.8604 for concept extraction, outperforming the traditional fine-tuning and hard prompt-based models by 0.6~3.1% and 1.2~2.9%, respectively; GatorTron-345M with soft prompting achieves the best F1-scores of 0.8332 and 0.7488 for end-to-end relation extraction, outperforming the other two models by 0.2~2% and 0.6~11.7%, respectively. When LLMs are frozen, small (i.e., 345 million parameters) LLMs have a big gap to be competitive with unfrozen models; scaling LLMs up to billions of parameters makes frozen LLMs competitive with unfrozen LLMs. For cross-institute evaluation, soft prompting with a frozen GatorTron-8.9B model achieved the best performance. This study demonstrates that (1) machines can learn soft prompts better than humans, (2) frozen LLMs have better few-shot learning ability and transfer learning ability to facilitate muti-institution applications, and (3) frozen LLMs require large models.

Tianyi Liu, Zhaorui Tan, Muyin Chen et al.

Brain tumor segmentation is often based on multiple magnetic resonance imaging (MRI). However, in clinical practice, certain modalities of MRI may be missing, which presents a more difficult scenario. To cope with this challenge, Knowledge Distillation, Domain Adaption, and Shared Latent Space have emerged as commonly promising strategies. However, recent efforts typically overlook the modality gaps and thus fail to learn important invariant feature representations across different modalities. Such drawback consequently leads to limited performance for missing modality models. To ameliorate these problems, pre-trained models are used in natural visual segmentation tasks to minimize the gaps. However, promising pre-trained models are often unavailable in medical image segmentation tasks. Along this line, in this paper, we propose a novel paradigm that aligns latent features of involved modalities to a well-defined distribution anchor as the substitution of the pre-trained model}. As a major contribution, we prove that our novel training paradigm ensures a tight evidence lower bound, thus theoretically certifying its effectiveness. Extensive experiments on different backbones validate that the proposed paradigm can enable invariant feature representations and produce models with narrowed modality gaps. Models with our alignment paradigm show their superior performance on both BraTS2018 and BraTS2020 datasets.

De Cheng, Yue Lu, Lingfeng He et al.

Continual Learning (CL) aims to equip AI models with the ability to learn a sequence of tasks over time, without forgetting previously learned knowledge. Recently, State Space Models (SSMs), particularly the Mamba model, have achieved notable success in computer vision. Building on the strengths of SSMs, this study explores leveraging the Mamba model for CL. Therefore, we introduce Mamba-CL, a framework that continuously fine-tunes the core SSMs of the large-scale Mamba foundation model by updating parameters orthogonal to the feature subspace of previous tasks. This approach theoretically guarantees the consistency objective aiming to preserves consistent output for each SSM module across both previous and current tasks, so as to overcome catastrophic forgetting issue. Specifically, we achieve this goal by deducing the overall consistency constraints on four key time-invariant parameters in the Mamba model, streamlining its recurrent state-space structure and non-linear discretization process in SSM. In practice, we apply the null-space projection to efficiently implement the orthogonality within Mamba model. Extensive experiments on four class-incremental benchmarks demonstrate the effectiveness of Mamba-CL for anti-forgetting, achieving superior performances to state-of-the-art methods. Code is available in the supplementary materials.

Jianan Ye, Weiguang Zhao, Xi Yang et al.

Point cloud anomaly detection under the anomaly-free setting poses significant challenges as it requires accurately capturing the features of 3D normal data to identify deviations indicative of anomalies. Current efforts focus on devising reconstruction tasks, such as acquiring normal data representations by restoring normal samples from altered, pseudo-anomalous counterparts. Our findings reveal that distributing attention equally across normal and pseudo-anomalous data tends to dilute the model's focus on anomalous deviations. The challenge is further compounded by the inherently disordered and sparse nature of 3D point cloud data. In response to those predicaments, we introduce an innovative approach that emphasizes learning point offsets, targeting more informative pseudo-abnormal points, thus fostering more effective distillation of normal data representations. We also have crafted an augmentation technique that is steered by normal vectors, facilitating the creation of credible pseudo anomalies that enhance the efficiency of the training process. Our comprehensive experimental evaluation on the Anomaly-ShapeNet and Real3D-AD datasets evidences that our proposed method outperforms existing state-of-the-art approaches, achieving an average enhancement of 9.0% and 1.4% in the AUC-ROC detection metric across these datasets, respectively.

Chenru Jiang, Chengrui Zhang, Xi Yang et al.

This paper delves into the study of 3D point cloud reconstruction from a single image. Our objective is to develop the Consistency Diffusion Model, exploring synergistic 2D and 3D priors in the Bayesian framework to ensure superior consistency in the reconstruction process, a challenging yet critical requirement in this field. Specifically, we introduce a pioneering training framework under diffusion models that brings two key innovations. First, we convert 3D structural priors derived from the initial 3D point cloud as a bound term to increase evidence in the variational Bayesian framework, leveraging these robust intrinsic priors to tightly govern the diffusion training process and bolster consistency in reconstruction. Second, we extract and incorporate 2D priors from the single input image, projecting them onto the 3D point cloud to enrich the guidance for diffusion training. Our framework not only sidesteps potential model learning shifts that may arise from directly imposing additional constraints during training but also precisely transposes the 2D priors into the 3D domain. Extensive experimental evaluations reveal that our approach sets new benchmarks in both synthetic and real-world datasets. The code is included with the submission.

Zhaorui Tan, Xi Yang, Tan Pan et al.

Variations in medical imaging modalities and individual anatomical differences pose challenges to cross-modality generalization in multi-modal tasks. Existing methods often concentrate exclusively on common anatomical patterns, thereby neglecting individual differences and consequently limiting their generalization performance. This paper emphasizes the critical role of learning individual-level invariance, i.e., personalized representation $\mathbb{X}_h$, to enhance multi-modality generalization under both homogeneous and heterogeneous settings. It reveals that mappings from individual biological profile to different medical modalities remain static across the population, which is implied in the personalization process. We propose a two-stage approach: pre-training with invariant representation $\mathbb{X}_h$ for personalization, then fine-tuning for diverse downstream tasks. We provide both theoretical and empirical evidence demonstrating the feasibility and advantages of personalization, showing that our approach yields greater generalizability and transferability across diverse multi-modal medical tasks compared to methods lacking personalization. Extensive experiments further validate that our approach significantly enhances performance in various generalization scenarios.

Tianyi Liu, Zhaorui Tan, Haochuan Jiang et al.

Brain tumor segmentation is often based on multiple magnetic resonance imaging (MRI). However, in clinical practice, certain modalities of MRI may be missing, which presents an even more difficult scenario. To cope with this challenge, knowledge distillation has emerged as one promising strategy. However, recent efforts typically overlook the modality gaps and thus fail to learn invariant feature representations across different modalities. Such drawback consequently leads to limited performance for both teachers and students. To ameliorate these problems, in this paper, we propose a novel paradigm that aligns latent features of involved modalities to a well-defined distribution anchor. As a major contribution, we prove that our novel training paradigm ensures a tight evidence lower bound, thus theoretically certifying its effectiveness. Extensive experiments on different backbones validate that the proposed paradigm can enable invariant feature representations and produce a teacher with narrowed modality gaps. This further offers superior guidance for missing modality students, achieving an average improvement of 1.75 on dice score.