Domen Preložnik

Domen Preložnik, Žiga Špiclin

Inter-scanner variability of magnetic resonance imaging has an adverse impact on the diagnostic and prognostic quality of the scans and necessitates the development of models robust to domain shift inflicted by the unseen scanner data. Review of recent advances in domain adaptation showed that efficacy of strategies involving modifications or constraints on the latent space appears to be contingent upon the level and/or depth of supervision during model training. In this paper, we therefore propose an unsupervised domain adaptation technique based on self-supervised multi-stage unlearning (SSMSU). Building upon the state-of-the-art segmentation framework nnU-Net, we employ deep supervision at deep encoder stages using domain classifier unlearning, applied sequentially across the deep stages to suppress domain-related latent features. Following self-configurable approach of the nnU-Net, the auxiliary feedback loop implements a self-supervised backpropagation schedule for the unlearning process, since continuous unlearning was found to have a detrimental effect on the main segmentation task. Experiments were carried out on four public datasets for benchmarking white-matter lesion segmentation methods. Five benchmark models and/or strategies, covering passive to active unsupervised domain adaptation, were tested. In comparison, the SSMSU demonstrated the advantage of unlearning by enhancing lesion sensitivity and limiting false detections, which resulted in higher overall segmentation quality in terms of segmentation overlap and relative lesion volume error. The proposed model inputs only the FLAIR modality, which simplifies preprocessing pipelines, eliminates the need for inter-modality registration errors and harmonization, which can introduce variability. Source code is available on https://github.com/Pubec/nnunetv2-unlearning.

Vladyslav Zalevskyi, Thomas Sanchez, Misha Kaandorp et al.

Accurate fetal brain tissue segmentation and biometric analysis are essential for studying brain development in utero. The FeTA Challenge 2024 advanced automated fetal brain MRI analysis by introducing biometry prediction as a new task alongside tissue segmentation. For the first time, our diverse multi-centric test set included data from a new low-field (0.55T) MRI dataset. Evaluation metrics were also expanded to include the topology-specific Euler characteristic difference (ED). Sixteen teams submitted segmentation methods, most of which performed consistently across both high- and low-field scans. However, longitudinal trends indicate that segmentation accuracy may be reaching a plateau, with results now approaching inter-rater variability. The ED metric uncovered topological differences that were missed by conventional metrics, while the low-field dataset achieved the highest segmentation scores, highlighting the potential of affordable imaging systems when paired with high-quality reconstruction. Seven teams participated in the biometry task, but most methods failed to outperform a simple baseline that predicted measurements based solely on gestational age, underscoring the challenge of extracting reliable biometric estimates from image data alone. Domain shift analysis identified image quality as the most significant factor affecting model generalization, with super-resolution pipelines also playing a substantial role. Other factors, such as gestational age, pathology, and acquisition site, had smaller, though still measurable, effects. Overall, FeTA 2024 offers a comprehensive benchmark for multi-class segmentation and biometry estimation in fetal brain MRI, underscoring the need for data-centric approaches, improved topological evaluation, and greater dataset diversity to enable clinically robust and generalizable AI tools.