ZhiQiang Gao

LG
h-index73
24papers
172citations
Novelty55%
AI Score59

24 Papers

BMMay 29
AMix-2: Establishing Protein as a Native Modality in Large Language Models

Keyue Qiu, Yixin Wu, Lihao Wang et al.

We present AMix-2, a protein-text foundation model that establishes protein as a native modality in large language models (LLMs), unifying protein understanding and sequence design within a single foundation model. AMix-2 is built upon two key ideas: (1) a unified protein-text formulation that embeds natural language and protein sequence in a shared token space, enabling one model to perform biological reasoning and conditional design instead of separate downstream task-specialized models; and (2) a block-wise diffusion language modeling backbone that combines causal generation across blocks with bidirectional context and iterative refinement within blocks. This scheme better matches the intrinsic nature of proteins than a strict left-to-right factorization. To evaluate protein foundation models under realistic generalization settings, we further introduce ProteinArena, a comprehensive benchmark with time-aware and homology-aware protocols across various understanding and design tasks, and with baselines covering classical bioinformatics tools, protein-specialized models and LLMs. On ProteinArena, AMix-2 outperforms frontier LLMs and demonstrates competitive performance to task-specific protein models. Controlled experiments further show that the diffusion-based paradigm generally surpasses its autoregressive counterpart, highlighting the advantage of flexible generation order for protein sequences. We release both AMix-2 and ProteinArena to facilitate open research in protein foundation models.

CLDec 24, 2025
Reflection Pretraining Enables Token-Level Self-Correction in Biological Sequence Models

Xiang Zhang, Jiaqi Wei, Yuejin Yang et al.

Chain-of-Thought (CoT) prompting has significantly advanced task-solving capabilities in natural language processing with large language models. Unlike standard prompting, CoT encourages the model to generate intermediate reasoning steps, non-answer tokens, that help guide the model toward more accurate final outputs. These intermediate steps enable more complex reasoning processes such as error correction, memory management, future planning, and self-reflection. However, applying CoT to non-natural language domains, such as protein and RNA language models, is not yet possible, primarily due to the limited expressiveness of their token spaces (e.g., amino acid tokens). In this work, we propose and define the concept of language expressiveness: the ability of a given language, using its tokens and grammar, to encode information. We show that the limited expressiveness of protein language severely restricts the applicability of CoT-style reasoning. To overcome this, we introduce reflection pretraining, for the first time in a biological sequence model, which enables the model to engage in intermediate reasoning through the generation of auxiliary "thinking tokens" beyond simple answer tokens. Theoretically, we demonstrate that our augmented token set significantly enhances biological language expressiveness, thereby improving the overall reasoning capacity of the model. Experimentally, our pretraining approach teaches protein models to self-correct and leads to substantial performance gains compared to standard pretraining.

CLAug 7, 2024Code
NatLan: Native Language Prompting Facilitates Knowledge Elicitation Through Language Trigger Provision and Domain Trigger Retention

Baixuan Li, Yunlong Fan, Tianyi Ma et al.

Multilingual large language models (MLLMs) do not perform as well when answering questions in non-dominant languages as they do in their dominant languages. Although existing translate-then-answer methods alleviate this issue, the mechanisms behind their effectiveness remain unclear. In this study, we analogize the dominant language of MLLMs to the native language of humans and use two human cognitive features: the Language Trigger (LT) and the Domain Trigger (DT), to interpret the mechanisms behind translate-then-answer methods. This reveals that while sufficient LTs are provided by these methods, there remains a deficiency in DT retention. To mitigate this issue, we propose Native Language Prompting (NatLan), employing a Multi-MLLM collaboration strategy and introducing an additional role-enhanced domain-specific MLLM with stronger multilingual understanding capabilities as the translator. Across five language QA benchmarks, NatLan achieves up to a 31.28% improvement in accuracy and, compared to existing state-of-the-art methods, provides comparable or greater retention of DTs in up to 87% of cases. Our code is available at https://github.com/AnonyNLP/NatLan.

AIDec 18, 2025
Probing Scientific General Intelligence of LLMs with Scientist-Aligned Workflows

Wanghan Xu, Yuhao Zhou, Yifan Zhou et al.

Despite advances in scientific AI, a coherent framework for Scientific General Intelligence (SGI)-the ability to autonomously conceive, investigate, and reason across scientific domains-remains lacking. We present an operational SGI definition grounded in the Practical Inquiry Model (PIM: Deliberation, Conception, Action, Perception) and operationalize it via four scientist-aligned tasks: deep research, idea generation, dry/wet experiments, and experimental reasoning. SGI-Bench comprises over 1,000 expert-curated, cross-disciplinary samples inspired by Science's 125 Big Questions, enabling systematic evaluation of state-of-the-art LLMs. Results reveal gaps: low exact match (10--20%) in deep research despite step-level alignment; ideas lacking feasibility and detail; high code executability but low execution result accuracy in dry experiments; low sequence fidelity in wet protocols; and persistent multimodal comparative-reasoning challenges. We further introduce Test-Time Reinforcement Learning (TTRL), which optimizes retrieval-augmented novelty rewards at inference, enhancing hypothesis novelty without reference answer. Together, our PIM-grounded definition, workflow-centric benchmark, and empirical insights establish a foundation for AI systems that genuinely participate in scientific discovery.

QMDec 18, 2023Code
ContraNovo: A Contrastive Learning Approach to Enhance De Novo Peptide Sequencing

Zhi Jin, Sheng Xu, Xiang Zhang et al.

De novo peptide sequencing from mass spectrometry (MS) data is a critical task in proteomics research. Traditional de novo algorithms have encountered a bottleneck in accuracy due to the inherent complexity of proteomics data. While deep learning-based methods have shown progress, they reduce the problem to a translation task, potentially overlooking critical nuances between spectra and peptides. In our research, we present ContraNovo, a pioneering algorithm that leverages contrastive learning to extract the relationship between spectra and peptides and incorporates the mass information into peptide decoding, aiming to address these intricacies more efficiently. Through rigorous evaluations on two benchmark datasets, ContraNovo consistently outshines contemporary state-of-the-art solutions, underscoring its promising potential in enhancing de novo peptide sequencing. The source code is available at https://github.com/BEAM-Labs/ContraNovo.

CVMay 9, 2025Code
Noise-Consistent Siamese-Diffusion for Medical Image Synthesis and Segmentation

Kunpeng Qiu, Zhiqiang Gao, Zhiying Zhou et al.

Deep learning has revolutionized medical image segmentation, yet its full potential remains constrained by the paucity of annotated datasets. While diffusion models have emerged as a promising approach for generating synthetic image-mask pairs to augment these datasets, they paradoxically suffer from the same data scarcity challenges they aim to mitigate. Traditional mask-only models frequently yield low-fidelity images due to their inability to adequately capture morphological intricacies, which can critically compromise the robustness and reliability of segmentation models. To alleviate this limitation, we introduce Siamese-Diffusion, a novel dual-component model comprising Mask-Diffusion and Image-Diffusion. During training, a Noise Consistency Loss is introduced between these components to enhance the morphological fidelity of Mask-Diffusion in the parameter space. During sampling, only Mask-Diffusion is used, ensuring diversity and scalability. Comprehensive experiments demonstrate the superiority of our method. Siamese-Diffusion boosts SANet's mDice and mIoU by 3.6% and 4.4% on the Polyps, while UNet improves by 1.52% and 1.64% on the ISIC2018. Code is available at GitHub.

LGMay 11
Fix the Loss, Not the Radius: Rethinking the Adversarial Perturbation of Sharpness-Aware Minimization

Jinping Wang, Qinhan Liu, Zhiwu Xie et al.

Sharpness-Aware Minimization (SAM) improves generalization by minimizing the worst-case loss within a fixed parameter-space radius neighborhood. SAM and its variants mainly rely on a first-order linearized surrogate, while flat minima are inherently a second-order (curvature) notion.We revisit this mismatch and propose Loss-Equated SAM (LE-SAM), which inverts the traditional SAM mechanism that fixed perturbation radius with a fixed loss-space budget,effectively removing gradient-norm-dominated learning signals and shifting optimization toward curvature-dominated terms. Extensive experiments across diverse benchmarks and tasks demonstrate the strong generalization ability of LESAM that consistently outperforms SAM and even its variants, achieving the state-of-the-art performance.

LGMay 11
Rethinking Loss Reweighting for Imbalance Learning as an Inverse Problem: A Neural Collapse Point of View

Jinping Wang, Zixin Tong, Zhiwu Xie et al.

Loss reweighting is a widely used strategy for long-tailed classification, but existing reweighting strategies often rely on heuristics and rarely define a well-specified target. Inspired by Neural Collapse (NC), the ideal simplex Equiangular Tight Frame (ETF) terminal geometry suggests equal per-class average loss as a reasonable target for reweighting. Based on the ideal equal loss objective, we consider loss reweighting as an inverse problem and propose an inverse-view reweighting strategy that infers class weights dynamically to match this ideal objective. Empirically, NC metrics suggest our method can effectively reduce the loss imbalance coefficient and closer alignment with NC geometry while consistently outperforming strong long-tailed baselines on different datasets.

LGOct 9, 2025Code
Bidirectional Representations Augmented Autoregressive Biological Sequence Generation:Application in De Novo Peptide Sequencing

Xiang Zhang, Jiaqi Wei, Zijie Qiu et al.

Autoregressive (AR) models, common in sequence generation, are limited in many biological tasks such as de novo peptide sequencing and protein modeling by their unidirectional nature, failing to capture crucial global bidirectional token dependencies. Non-Autoregressive (NAR) models offer holistic, bidirectional representations but face challenges with generative coherence and scalability. To transcend this, we propose a hybrid framework enhancing AR generation by dynamically integrating rich contextual information from non-autoregressive mechanisms. Our approach couples a shared input encoder with two decoders: a non-autoregressive one learning latent bidirectional biological features, and an AR decoder synthesizing the biological sequence by leveraging these bidirectional features. A novel cross-decoder attention module enables the AR decoder to iteratively query and integrate these bidirectional features, enriching its predictions. This synergy is cultivated via a tailored training strategy with importance annealing for balanced objectives and cross-decoder gradient blocking for stable, focused learning. Evaluations on a demanding nine-species benchmark of de novo peptide sequencing show that our model substantially surpasses AR and NAR baselines. It uniquely harmonizes AR stability with NAR contextual awareness, delivering robust, superior performance on diverse downstream data. This research advances biological sequence modeling techniques and contributes a novel architectural paradigm for augmenting AR models with enhanced bidirectional understanding for complex sequence generation. Code is available at https://github.com/BEAM-Labs/denovo.

CLDec 27, 2025
Structured Prompting and LLM Ensembling for Multimodal Conversational Aspect-based Sentiment Analysis

Zhiqiang Gao, Shihao Gao, Zixing Zhang et al.

Understanding sentiment in multimodal conversations is a complex yet crucial challenge toward building emotionally intelligent AI systems. The Multimodal Conversational Aspect-based Sentiment Analysis (MCABSA) Challenge invited participants to tackle two demanding subtasks: (1) extracting a comprehensive sentiment sextuple, including holder, target, aspect, opinion, sentiment, and rationale from multi-speaker dialogues, and (2) detecting sentiment flipping, which detects dynamic sentiment shifts and their underlying triggers. For Subtask-I, in the present paper, we designed a structured prompting pipeline that guided large language models (LLMs) to sequentially extract sentiment components with refined contextual understanding. For Subtask-II, we further leveraged the complementary strengths of three LLMs through ensembling to robustly identify sentiment transitions and their triggers. Our system achieved a 47.38% average score on Subtask-I and a 74.12% exact match F1 on Subtask-II, showing the effectiveness of step-wise refinement and ensemble strategies in rich, multimodal sentiment analysis tasks.

CRApr 4
ProtoGuard-SL: Prototype Consistency Based Backdoor Defense for Vertical Split Learning

Yuhan Shui, Ruobin Jin, Zhihao Dou et al.

Vertical split learning (SL) enables collaborative model training across parties holding complementary features without sharing raw data, but recent work has shown that it is highly vulnerable to poisoning-based backdoor attacks operating on intermediate embeddings. By compromising malicious clients, adversaries can inject stealthy triggers that manipulate the server-side model while remaining difficult to detect, and existing defenses provide limited robustness against adaptive attacks. In this paper, we propose ProtoGuard-SL, a server-side defense that improves the robustness of split learning by exploiting class-conditional representation consistency in the embedding space. Our approach is motivated by the observation that benign embeddings within the same class exhibit stable semantic alignment, whereas poisoned embeddings inevitably disrupt this structure. ProtoGuard-SL adopts a two-stage framework that constructs robust class prototypes and transforms embeddings into a prototype-consistency representation, followed by a class-conditional, distribution-free conformal filtering strategy to identify and remove anomalous embeddings. Extensive experiments are conducted on three datasets, CIFAR-10, SVHN, and Bank Marketing, under three different attack settings demonstrate that our method achieves state-of-the-art performance.

LGAug 18, 2025
From AI for Science to Agentic Science: A Survey on Autonomous Scientific Discovery

Jiaqi Wei, Yuejin Yang, Xiang Zhang et al. · tsinghua

Artificial intelligence (AI) is reshaping scientific discovery, evolving from specialized computational tools into autonomous research partners. We position Agentic Science as a pivotal stage within the broader AI for Science paradigm, where AI systems progress from partial assistance to full scientific agency. Enabled by large language models (LLMs), multimodal systems, and integrated research platforms, agentic AI shows capabilities in hypothesis generation, experimental design, execution, analysis, and iterative refinement -- behaviors once regarded as uniquely human. This survey provides a domain-oriented review of autonomous scientific discovery across life sciences, chemistry, materials science, and physics. We unify three previously fragmented perspectives -- process-oriented, autonomy-oriented, and mechanism-oriented -- through a comprehensive framework that connects foundational capabilities, core processes, and domain-specific realizations. Building on this framework, we (i) trace the evolution of AI for Science, (ii) identify five core capabilities underpinning scientific agency, (iii) model discovery as a dynamic four-stage workflow, (iv) review applications across the above domains, and (v) synthesize key challenges and future opportunities. This work establishes a domain-oriented synthesis of autonomous scientific discovery and positions Agentic Science as a structured paradigm for advancing AI-driven research.

LGMay 23, 2025
Universal Biological Sequence Reranking for Improved De Novo Peptide Sequencing

Zijie Qiu, Jiaqi Wei, Xiang Zhang et al.

De novo peptide sequencing is a critical task in proteomics. However, the performance of current deep learning-based methods is limited by the inherent complexity of mass spectrometry data and the heterogeneous distribution of noise signals, leading to data-specific biases. We present RankNovo, the first deep reranking framework that enhances de novo peptide sequencing by leveraging the complementary strengths of multiple sequencing models. RankNovo employs a list-wise reranking approach, modeling candidate peptides as multiple sequence alignments and utilizing axial attention to extract informative features across candidates. Additionally, we introduce two new metrics, PMD (Peptide Mass Deviation) and RMD (residual Mass Deviation), which offer delicate supervision by quantifying mass differences between peptides at both the sequence and residue levels. Extensive experiments demonstrate that RankNovo not only surpasses its base models used to generate training candidates for reranking pre-training, but also sets a new state-of-the-art benchmark. Moreover, RankNovo exhibits strong zero-shot generalization to unseen models whose generations were not exposed during training, highlighting its robustness and potential as a universal reranking framework for peptide sequencing. Our work presents a novel reranking strategy that fundamentally challenges existing single-model paradigms and advances the frontier of accurate de novo sequencing. Our source code is provided on GitHub.

AIOct 2, 2025
Plan Then Action:High-Level Planning Guidance Reinforcement Learning for LLM Reasoning

Zhihao Dou, Qinjian Zhao, Zhongwei Wan et al.

Large language models (LLMs) have demonstrated remarkable reasoning abilities in complex tasks, often relying on Chain-of-Thought (CoT) reasoning. However, due to their autoregressive token-level generation, the reasoning process is largely constrained to local decision-making and lacks global planning. This limitation frequently results in redundant, incoherent, or inaccurate reasoning, which significantly degrades overall performance. Existing approaches, such as tree-based algorithms and reinforcement learning (RL), attempt to address this issue but suffer from high computational costs and often fail to produce optimal reasoning trajectories. To tackle this challenge, we propose Plan-Then-Action Enhanced Reasoning with Group Relative Policy Optimization PTA-GRPO, a two-stage framework designed to improve both high-level planning and fine-grained CoT reasoning. In the first stage, we leverage advanced LLMs to distill CoT into compact high-level guidance, which is then used for supervised fine-tuning (SFT). In the second stage, we introduce a guidance-aware RL method that jointly optimizes the final output and the quality of high-level guidance, thereby enhancing reasoning effectiveness. We conduct extensive experiments on multiple mathematical reasoning benchmarks, including MATH, AIME2024, AIME2025, and AMC, across diverse base models such as Qwen2.5-7B-Instruct, Qwen3-8B, Qwen3-14B, and LLaMA3.2-3B. Experimental results demonstrate that PTA-GRPO consistently achieves stable and significant improvements across different models and tasks, validating its effectiveness and generalization.

BMJun 16, 2025
Curriculum Learning for Biological Sequence Prediction: The Case of De Novo Peptide Sequencing

Xiang Zhang, Jiaqi Wei, Zijie Qiu et al.

Peptide sequencing-the process of identifying amino acid sequences from mass spectrometry data-is a fundamental task in proteomics. Non-Autoregressive Transformers (NATs) have proven highly effective for this task, outperforming traditional methods. Unlike autoregressive models, which generate tokens sequentially, NATs predict all positions simultaneously, leveraging bidirectional context through unmasked self-attention. However, existing NAT approaches often rely on Connectionist Temporal Classification (CTC) loss, which presents significant optimization challenges due to CTC's complexity and increases the risk of training failures. To address these issues, we propose an improved non-autoregressive peptide sequencing model that incorporates a structured protein sequence curriculum learning strategy. This approach adjusts protein's learning difficulty based on the model's estimated protein generational capabilities through a sampling process, progressively learning peptide generation from simple to complex sequences. Additionally, we introduce a self-refining inference-time module that iteratively enhances predictions using learned NAT token embeddings, improving sequence accuracy at a fine-grained level. Our curriculum learning strategy reduces NAT training failures frequency by more than 90% based on sampled training over various data distributions. Evaluations on nine benchmark species demonstrate that our approach outperforms all previous methods across multiple metrics and species.

LGMay 30, 2025
PhySense: Principle-Based Physics Reasoning Benchmarking for Large Language Models

Yinggan Xu, Yue Liu, Zhiqiang Gao et al.

Large language models (LLMs) have rapidly advanced and are increasingly capable of tackling complex scientific problems, including those in physics. Despite this progress, current LLMs often fail to emulate the concise, principle-based reasoning characteristic of human experts, instead generating lengthy and opaque solutions. This discrepancy highlights a crucial gap in their ability to apply core physical principles for efficient and interpretable problem solving. To systematically investigate this limitation, we introduce PhySense, a novel principle-based physics reasoning benchmark designed to be easily solvable by experts using guiding principles, yet deceptively difficult for LLMs without principle-first reasoning. Our evaluation across multiple state-of-the-art LLMs and prompt types reveals a consistent failure to align with expert-like reasoning paths, providing insights for developing AI systems with efficient, robust and interpretable principle-based scientific reasoning.

BMJul 11, 2025
AMix-1: A Pathway to Test-Time Scalable Protein Foundation Model

Changze Lv, Jiang Zhou, Siyu Long et al.

We introduce AMix-1, a powerful protein foundation model built on Bayesian Flow Networks and empowered by a systematic training methodology, encompassing pretraining scaling laws, emergent capability analysis, in-context learning mechanism, and test-time scaling algorithm. To guarantee robust scalability, we establish a predictive scaling law and reveal the progressive emergence of structural understanding via loss perspective, culminating in a strong 1.7-billion model. Building on this foundation, we devise a multiple sequence alignment (MSA)-based in-context learning strategy to unify protein design into a general framework, where AMix-1 recognizes deep evolutionary signals among MSAs and consistently generates structurally and functionally coherent proteins. This framework enables the successful design of a dramatically improved AmeR variant with an up to $50\times$ activity increase over its wild type. Pushing the boundaries of protein engineering, we further empower AMix-1 with an evolutionary test-time scaling algorithm for in silico directed evolution that delivers substantial, scalable performance gains as verification budgets are intensified, laying the groundwork for next-generation lab-in-the-loop protein design.

QMDec 13, 2025
Accurate de novo sequencing of the modified proteome with OmniNovo

Yuhan Chen, Shang Qu, Zhiqiang Gao et al.

Post-translational modifications (PTMs) serve as a dynamic chemical language regulating protein function, yet current proteomic methods remain blind to a vast portion of the modified proteome. Standard database search algorithms suffer from a combinatorial explosion of search spaces, limiting the identification of uncharacterized or complex modifications. Here we introduce OmniNovo, a unified deep learning framework for reference-free sequencing of unmodified and modified peptides directly from tandem mass spectra. Unlike existing tools restricted to specific modification types, OmniNovo learns universal fragmentation rules to decipher diverse PTMs within a single coherent model. By integrating a mass-constrained decoding algorithm with rigorous false discovery rate estimation, OmniNovo achieves state-of-the-art accuracy, identifying 51\% more peptides than standard approaches at a 1\% false discovery rate. Crucially, the model generalizes to biological sites unseen during training, illuminating the dark matter of the proteome and enabling unbiased comprehensive analysis of cellular regulation.

LGNov 25, 2025
Space Alignment Matters: The Missing Piece for Inducing Neural Collapse in Long-Tailed Learning

Jinping Wang, Zhiqiang Gao, Zhiwu Xie

Recent studies on Neural Collapse (NC) reveal that, under class-balanced conditions, the class feature means and classifier weights spontaneously align into a simplex equiangular tight frame (ETF). In long-tailed regimes, however, severe sample imbalance tends to prevent the emergence of the NC phenomenon, resulting in poor generalization performance. Current efforts predominantly seek to recover the ETF geometry by imposing constraints on features or classifier weights, yet overlook a critical problem: There is a pronounced misalignment between the feature and the classifier weight spaces. In this paper, we theoretically quantify the harm of such misalignment through an optimal error exponent analysis. Built on this insight, we propose three explicit alignment strategies that plug-and-play into existing long-tail methods without architectural change. Extensive experiments on the CIFAR-10-LT, CIFAR-100-LT, and ImageNet-LT datasets consistently boost examined baselines and achieve the state-of-the-art performances.

LGNov 22, 2025
Escaping Optimization Stagnation: Taking Steps Beyond Task Arithmetic via Difference Vectors

Jinping Wang, Zhiqiang Gao, Dinggen Zhang et al.

Current methods for editing pre-trained models face significant challenges, primarily high computational costs and limited scalability. Task arithmetic has recently emerged as a promising solution, using simple arithmetic operations-addition and negation-based on task vectors which are the differences between fine-tuned and pre-trained model weights, to efficiently modify model behavior. However, the full potential of task arithmetic remains underexplored, primarily due to limited mechanisms for overcoming optimization stagnation. To address this challenge, we introduce the notion of difference vector, a generalized form of task vectors derived from the historical movements during optimization. Using difference vectors as directed perturbations, we propose the Difference Vector-based Anisotropic Scaling Iterative algorithm (DV-BASI) to enable a continuous optimization process for task arithmetic methods without relying on any additional modules or components. Notably, by leveraging escapability and directional advantages of difference vectors, the average performance on different tasks of the multi-task model merged by DV-BASI may even outperform models individually fine-tuned. Based on this observation, we extend the application of difference vectors to a feasible fine-tuning method for single-task models. On the practical side, DV-BASI allows expressive searching directions with few learnable parameters and forms a scalable framework. We also integrate DV-BASI with task arithmetic methods and advanced optimization techniques to achieve state-of-the-art performance on both supervised and unsupervised evaluation protocols.

AISep 30, 2025
SafeBehavior: Simulating Human-Like Multistage Reasoning to Mitigate Jailbreak Attacks in Large Language Models

Qinjian Zhao, Jiaqi Wang, Zhiqiang Gao et al.

Large Language Models (LLMs) have achieved impressive performance across diverse natural language processing tasks, but their growing power also amplifies potential risks such as jailbreak attacks that circumvent built-in safety mechanisms. Existing defenses including input paraphrasing, multi step evaluation, and safety expert models often suffer from high computational costs, limited generalization, or rigid workflows that fail to detect subtle malicious intent embedded in complex contexts. Inspired by cognitive science findings on human decision making, we propose SafeBehavior, a novel hierarchical jailbreak defense mechanism that simulates the adaptive multistage reasoning process of humans. SafeBehavior decomposes safety evaluation into three stages: intention inference to detect obvious input risks, self introspection to assess generated responses and assign confidence based judgments, and self revision to adaptively rewrite uncertain outputs while preserving user intent and enforcing safety constraints. We extensively evaluate SafeBehavior against five representative jailbreak attack types including optimization based, contextual manipulation, and prompt based attacks and compare it with seven state of the art defense baselines. Experimental results show that SafeBehavior significantly improves robustness and adaptability across diverse threat scenarios, offering an efficient and human inspired approach to safeguarding LLMs against jailbreak attempts.

CVJan 8, 2025
Discrete Wavelet Transform-Based Capsule Network for Hyperspectral Image Classification

Zhiqiang Gao, Jiaqi Wang, Hangchi Shen et al.

Hyperspectral image (HSI) classification is a crucial technique for remote sensing to build large-scale earth monitoring systems. HSI contains much more information than traditional visual images for identifying the categories of land covers. One recent feasible solution for HSI is to leverage CapsNets for capturing spectral-spatial information. However, these methods require high computational requirements due to the full connection architecture between stacked capsule layers. To solve this problem, a DWT-CapsNet is proposed to identify partial but important connections in CapsNet for a effective and efficient HSI classification. Specifically, we integrate a tailored attention mechanism into a Discrete Wavelet Transform (DWT)-based downsampling layer, alleviating the information loss problem of conventional downsampling operation in feature extractors. Moreover, we propose a novel multi-scale routing algorithm that prunes a large proportion of connections in CapsNet. A capsule pyramid fusion mechanism is designed to aggregate the spectral-spatial relationships in multiple levels of granularity, and then a self-attention mechanism is further conducted in a partially and locally connected architecture to emphasize the meaningful relationships. As shown in the experimental results, our method achieves state-of-the-art accuracy while keeping lower computational demand regarding running time, flops, and the number of parameters, rendering it an appealing choice for practical implementation in HSI classification.

CLJan 27, 2022
A Higher-Order Semantic Dependency Parser

Bin Li, Yunlong Fan, Yikemaiti Sataer et al.

Higher-order features bring significant accuracy gains in semantic dependency parsing. However, modeling higher-order features with exact inference is NP-hard. Graph neural networks (GNNs) have been demonstrated to be an effective tool for solving NP-hard problems with approximate inference in many graph learning tasks. Inspired by the success of GNNs, we investigate building a higher-order semantic dependency parser by applying GNNs. Instead of explicitly extracting higher-order features from intermediate parsing graphs, GNNs aggregate higher-order information concisely by stacking multiple GNN layers. Experimental results show that our model outperforms the previous state-of-the-art parser on the SemEval 2015 Task 18 English datasets.

CRJul 18, 2019
An AI-based, Multi-stage detection system of banking botnets

Li Ling, Zhiqiang Gao, Michael A Silas et al.

Banking Trojans, botnets are primary drivers of financially-motivated cybercrime. In this paper, we first analyzed how an APT-based banking botnet works step by step through the whole lifecycle. Specifically, we present a multi-stage system that detects malicious banking botnet activities which potentially target the organizations. The system leverages Cyber Data Lake as well as multiple artificial intelligence techniques at different stages. The evaluation results using public datasets showed that Deep Learning based detections were highly successful compared with baseline models.