Cagri Ozdemir

Cagri Ozdemir, Randy C. Hoover, Kyle Caudle et al.

Higher-order data with high dimensionality is of immense importance in many areas of machine learning, computer vision, and video analytics. Multidimensional arrays (commonly referred to as tensors) are used for arranging higher-order data structures while keeping the natural representation of the data samples. In the past decade, great efforts have been made to extend the classic linear discriminant analysis for higher-order data classification generally referred to as multilinear discriminant analysis (MDA). Most of the existing approaches are based on the Tucker decomposition and $\textit{n}$-mode tensor-matrix products. The current paper presents a new approach to tensor-based multilinear discriminant analysis referred to as High-Order Multilinear Discriminant Analysis (HOMLDA). This approach is based upon the tensor decomposition where an order-$\textit{n}$ tensor can be written as a product of order-$\textit{n}$ tensors and has a natural extension to traditional linear discriminant analysis (LDA). Furthermore, the resulting framework, HOMLDA, might produce a within-class scatter tensor that is close to singular. Thus, computing the inverse inaccurately may distort the discriminant analysis. To address this problem, an improved method referred to as Robust High-Order Multilinear Discriminant Analysis (RHOMLDA) is introduced. Experimental results on multiple data sets illustrate that our proposed approach provides improved classification performance with respect to the current Tucker decomposition-based supervised learning methods.

Jackson Cates, Randy C. Hoover, Kyle Caudle et al.

In the era of big data, there is an increasing demand for new methods for analyzing and forecasting 2-dimensional data. The current research aims to accomplish these goals through the combination of time-series modeling and multilinear algebraic systems. We expand previous autoregressive techniques to forecast multilinear data, aptly named the L-Transform Tensor autoregressive (L-TAR for short). Tensor decompositions and multilinear tensor products have allowed for this approach to be a feasible method of forecasting. We achieve statistical independence between the columns of the observations through invertible discrete linear transforms, enabling a divide and conquer approach. We present an experimental validation of the proposed methods on datasets containing image collections, video sequences, sea surface temperature measurements, stock prices, and networks.

Cagri Ozdemir, Mohammad Al Olaimat, Yashu Vashishath et al.

Developing computational tools for integrative analysis across multiple types of omics data has been of immense importance in cancer molecular biology and precision medicine research. While recent advancements have yielded integrative prediction solutions for multi-omics data, these methods lack a comprehensive and cohesive understanding of the rationale behind their specific predictions. To shed light on personalized medicine and unravel previously unknown characteristics within integrative analysis of multi-omics data, we introduce a novel integrative neural network approach for cancer molecular subtype and biomedical classification applications, named Integrative Graph Convolutional Networks (IGCN). IGCN can identify which types of omics receive more emphasis for each patient to predict a certain class. Additionally, IGCN has the capability to pinpoint significant biomarkers from a range of omics data types. To demonstrate the superiority of IGCN, we compare its performance with other state-of-the-art approaches across different cancer subtype and biomedical classification tasks.