Farhad R. Nezami

CV
h-index95
3papers
22citations
Novelty45%
AI Score33

3 Papers

IVJul 22, 2024
A Diffusion Model for Simulation Ready Coronary Anatomy with Morpho-skeletal Control

Karim Kadry, Shreya Gupta, Jonas Sogbadji et al.

Virtual interventions enable the physics-based simulation of device deployment within coronary arteries. This framework allows for counterfactual reasoning by deploying the same device in different arterial anatomies. However, current methods to create such counterfactual arteries face a trade-off between controllability and realism. In this study, we investigate how Latent Diffusion Models (LDMs) can custom synthesize coronary anatomy for virtual intervention studies based on mid-level anatomic constraints such as topological validity, local morphological shape, and global skeletal structure. We also extend diffusion model guidance strategies to the context of morpho-skeletal conditioning and propose a novel guidance method for continuous attributes that adaptively updates the negative guiding condition throughout sampling. Our framework enables the generation and editing of coronary anatomy in a controllable manner, allowing device designers to derive mechanistic insights regarding anatomic variation and simulated device deployment.

CVDec 3, 2025
PULSE: A Unified Multi-Task Architecture for Cardiac Segmentation, Diagnosis, and Few-Shot Cross-Modality Clinical Adaptation

Hania Ghouse, Maryam Alsharqi, Farhad R. Nezami et al.

Cardiac image analysis remains fragmented across tasks: anatomical segmentation, disease classification, and grounded clinical report generation are typically handled by separate networks trained under different data regimes. No existing framework unifies these objectives within a single architecture while retaining generalization across imaging modalities and datasets. We introduce PULSE, a multi-task vision-language framework built on self-supervised representations and optimized through a composite supervision strategy that balances region overlap learning, pixel wise classification fidelity, and boundary aware IoU refinement. A multi-scale token reconstruction decoder enables anatomical segmentation, while shared global representations support disease classification and clinically grounded text output allowing the model to transition from pixels to structures and finally clinical reasoning within one architecture. Unlike prior task-specific pipelines, PULSE learns task-invariant cardiac priors, generalizes robustly across datasets, and can be adapted to new imaging modalities with minimal supervision. This moves the field closer to a scalable, foundation style cardiac analysis framework.

CVDec 30, 2023
Probing the Limits and Capabilities of Diffusion Models for the Anatomic Editing of Digital Twins

Karim Kadry, Shreya Gupta, Farhad R. Nezami et al.

Numerical simulations can model the physical processes that govern cardiovascular device deployment. When such simulations incorporate digital twins; computational models of patient-specific anatomy, they can expedite and de-risk the device design process. Nonetheless, the exclusive use of patient-specific data constrains the anatomic variability which can be precisely or fully explored. In this study, we investigate the capacity of Latent Diffusion Models (LDMs) to edit digital twins to create anatomic variants, which we term digital siblings. Digital twins and their corresponding siblings can serve as the basis for comparative simulations, enabling the study of how subtle anatomic variations impact the simulated deployment of cardiovascular devices, as well as the augmentation of virtual cohorts for device assessment. However, while diffusion models have been characterized in their ability to edit natural images, their capacity to anatomically edit digital twins has yet to be studied. Using a case example centered on 3D digital twins of cardiac anatomy, we implement various methods for generating digital siblings and characterize them through morphological and topological analyses. We specifically edit digital twins to introduce anatomic variation at different spatial scales and within localized regions, demonstrating the existence of bias towards common anatomic features. We further show that such anatomic bias can be leveraged for virtual cohort augmentation through selective editing, partially alleviating issues related to dataset imbalance and lack of diversity. Our experimental framework thus delineates the limits and capabilities of using latent diffusion models in synthesizing anatomic variation for in silico trials.