Ziyuan Ye

Runpeng Hou, Ziyuan Ye, Chengyu Yang et al.

Nonunion is one of the challenges faced by orthopedics clinics for the technical difficulties and high costs in photographing interosseous capillaries. Segmenting vessels and filling capillaries are critical in understanding the obstacles encountered in capillary growth. However, existing datasets for blood vessel segmentation mainly focus on the large blood vessels of the body, and the lack of labeled capillary image datasets greatly limits the methodological development and applications of vessel segmentation and capillary filling. Here, we present a benchmark dataset, named IFCIS-155, consisting of 155 2D capillary images with segmentation boundaries and vessel fillings annotated by biomedical experts, and 19 large-scale, high-resolution 3D capillary images. To obtain better images of interosseous capillaries, we leverage state-of-the-art immunofluorescence imaging techniques to highlight the rich vascular morphology of interosseous capillaries. We conduct comprehensive experiments to verify the effectiveness of the dataset and the benchmarking deep learning models (\eg UNet/UNet++ and the modified UNet/UNet++). Our work offers a benchmark dataset for training deep learning models for capillary image segmentation and provides a potential tool for future capillary research. The IFCIS-155 dataset and code are all publicly available at \url{https://github.com/ncclabsustech/IFCIS-55}.

Zexi Liu, Bohan Tang, Ziyuan Ye et al.

Hypergraphs play a pivotal role in the modelling of data featuring higher-order relations involving more than two entities. Hypergraph neural networks emerge as a powerful tool for processing hypergraph-structured data, delivering remarkable performance across various tasks, e.g., hypergraph node classification. However, these models struggle to capture global structural information due to their reliance on local message passing. To address this challenge, we propose a novel hypergraph learning framework, HyperGraph Transformer (HyperGT). HyperGT uses a Transformer-based neural network architecture to effectively consider global correlations among all nodes and hyperedges. To incorporate local structural information, HyperGT has two distinct designs: i) a positional encoding based on the hypergraph incidence matrix, offering valuable insights into node-node and hyperedge-hyperedge interactions; and ii) a hypergraph structure regularization in the loss function, capturing connectivities between nodes and hyperedges. Through these designs, HyperGT achieves comprehensive hypergraph representation learning by effectively incorporating global interactions while preserving local connectivity patterns. Extensive experiments conducted on real-world hypergraph node classification tasks showcase that HyperGT consistently outperforms existing methods, establishing new state-of-the-art benchmarks. Ablation studies affirm the effectiveness of the individual designs of our model.

Shimin Zhang, Xianwei Chen, Yufan Shen et al.

Reinforcement Learning with Verifiable Rewards (RLVR) has recently demonstrated remarkable potential in enhancing the reasoning capability of Large Reasoning Models (LRMs). However, RLVR often leads to entropy collapse, resulting in premature policy convergence and performance saturation. While manipulating token-level entropy has proven effective for promoting policy exploration, we argue that the latent dynamics underlying token generation encode a far richer computational structure for steering policy optimization toward a more effective exploration-exploitation tradeoff. To enable tractable analysis and intervention of the latent dynamics of LRMs, we leverage Koopman operator theory to obtain a linearized representation of their hidden-state dynamics. This enables us to introduce Dynamic Spectral Dispersion (DSD), a new metric to quantify the heterogeneity of the model's latent dynamics, serving as a direct indicator of policy exploration. Building upon these foundations, we propose Reasoning with Latent eXploration (ReLaX), a paradigm that explicitly incorporates latent dynamics to regulate exploration and exploitation during policy optimization. Comprehensive experiments across a wide range of multimodal and text-only reasoning benchmarks show that ReLaX significantly mitigates premature convergence and consistently achieves state-of-the-art performance.

Xuming Ran, Jie Zhang, Ziyuan Ye et al.

Artificial neural network (ANN) is a versatile tool to study the neural representation in the ventral visual stream, and the knowledge in neuroscience in return inspires ANN models to improve performance in the task. However, it is still unclear how to merge these two directions into a unified framework. In this study, we propose an integrated framework called Deep Autoencoder with Neural Response (DAE-NR), which incorporates information from ANN and the visual cortex to achieve better image reconstruction performance and higher neural representation similarity between biological and artificial neurons. The same visual stimuli (i.e., natural images) are input to both the mice brain and DAE-NR. The encoder of DAE-NR jointly learns the dependencies from neural spike encoding and image reconstruction. For the neural spike encoding task, the features derived from a specific hidden layer of the encoder are transformed by a mapping function to predict the ground-truth neural response under the constraint of image reconstruction. Simultaneously, for the image reconstruction task, the latent representation obtained by the encoder is assigned to a decoder to restore the original image under the guidance of neural information. In DAE-NR, the learning process of encoder, mapping function and decoder are all implicitly constrained by these two tasks. Our experiments demonstrate that if and only if with the joint learning, DAE-NRs can improve the performance of visual image reconstruction and increase the representation similarity between biological neurons and artificial neurons. The DAE-NR offers a new perspective on the integration of computer vision and neuroscience.