Lucas Luttner

Pratibha Kumari, Daniel Reisenbüchler, Lucas Luttner et al.

In recent years, there has been remarkable progress in the field of digital pathology, driven by the ability to model complex tissue patterns using advanced deep-learning algorithms. However, the robustness of these models is often severely compromised in the presence of data shifts (e.g., different stains, organs, centers, etc.). Alternatively, continual learning (CL) techniques aim to reduce the forgetting of past data when learning new data with distributional shift conditions. Specifically, rehearsal-based CL techniques, which store some past data in a buffer and then replay it with new data, have proven effective in medical image analysis tasks. However, privacy concerns arise as these approaches store past data, prompting the development of our novel Generative Latent Replay-based CL (GLRCL) approach. GLRCL captures the previous distribution through Gaussian Mixture Models instead of storing past samples, which are then utilized to generate features and perform latent replay with new data. We systematically evaluate our proposed framework under different shift conditions in histopathology data, including stain and organ shift. Our approach significantly outperforms popular buffer-free CL approaches and performs similarly to rehearsal-based CL approaches that require large buffers causing serious privacy violations.

Lucas Luttner

This paper introduces the "Uncertainty-aware Mixture of Experts" (uMoE), a novel solution aimed at addressing aleatoric uncertainty within Neural Network (NN) based predictive models. While existing methodologies primarily concentrate on managing uncertainty during inference, uMoE uniquely embeds uncertainty into the training phase. Employing a "Divide and Conquer" strategy, uMoE strategically partitions the uncertain input space into more manageable subspaces. It comprises Expert components, individually trained on their respective subspace uncertainties. Overarching the Experts, a Gating Unit, leveraging additional information regarding the distribution of uncertain in-puts across these subspaces, dynamically adjusts the weighting to minimize deviations from ground truth. Our findings demonstrate the superior performance of uMoE over baseline methods in effectively managing data uncertainty. Furthermore, through a comprehensive robustness analysis, we showcase its adaptability to varying uncertainty levels and propose optimal threshold parameters. This innovative approach boasts broad applicability across diverse da-ta-driven domains, including but not limited to biomedical signal processing, autonomous driving, and production quality control.

Daniel Reisenbüchler, Lucas Luttner, Nadine S. Schaadt et al.

In computational pathology, deep learning (DL) models for tasks such as segmentation or tissue classification are known to suffer from domain shifts due to different staining techniques. Stain adaptation aims to reduce the generalization error between different stains by training a model on source stains that generalizes to target stains. Despite the abundance of target stain data, a key challenge is the lack of annotations. To address this, we propose a joint training between artificially labeled and unlabeled data including all available stained images called Unsupervised Latent Stain Adaptation (ULSA). Our method uses stain translation to enrich labeled source images with synthetic target images in order to increase the supervised signals. Moreover, we leverage unlabeled target stain images using stain-invariant feature consistency learning. With ULSA we present a semi-supervised strategy for efficient stain adaptation without access to annotated target stain data. Remarkably, ULSA is task agnostic in patch-level analysis for whole slide images (WSIs). Through extensive evaluation on external datasets, we demonstrate that ULSA achieves state-of-the-art (SOTA) performance in kidney tissue segmentation and breast cancer classification across a spectrum of staining variations. Our findings suggest that ULSA is an important framework for stain adaptation in computational pathology.