John Buatti

h-index68
2papers

2 Papers

CVDec 7, 2023
gcDLSeg: Integrating Graph-cut into Deep Learning for Binary Semantic Segmentation

Hui Xie, Weiyu Xu, Ya Xing Wang et al.

Binary semantic segmentation in computer vision is a fundamental problem. As a model-based segmentation method, the graph-cut approach was one of the most successful binary segmentation methods thanks to its global optimality guarantee of the solutions and its practical polynomial-time complexity. Recently, many deep learning (DL) based methods have been developed for this task and yielded remarkable performance, resulting in a paradigm shift in this field. To combine the strengths of both approaches, we propose in this study to integrate the graph-cut approach into a deep learning network for end-to-end learning. Unfortunately, backward propagation through the graph-cut module in the DL network is challenging due to the combinatorial nature of the graph-cut algorithm. To tackle this challenge, we propose a novel residual graph-cut loss and a quasi-residual connection, enabling the backward propagation of the gradients of the residual graph-cut loss for effective feature learning guided by the graph-cut segmentation model. In the inference phase, globally optimal segmentation is achieved with respect to the graph-cut energy defined on the optimized image features learned from DL networks. Experiments on the public AZH chronic wound data set and the pancreas cancer data set from the medical segmentation decathlon (MSD) demonstrated promising segmentation accuracy, and improved robustness against adversarial attacks.

CVJun 11, 2019
Deep Neural Networks for Surface Segmentation Meet Conditional Random Fields

Leixin Zhou, Zisha Zhong, Abhay Shah et al.

Automated surface segmentation is important and challenging in many medical image analysis applications. Recent deep learning based methods have been developed for various object segmentation tasks. Most of them are a classification based approach (e.g., U-net), which predicts the probability of being target object or background for each voxel. One problem of those methods is lacking of topology guarantee for segmented objects, and usually post processing is needed to infer the boundary surface of the object. In this paper, a novel model based on 3-D convolutional neural networks (CNNs) and Conditional Random Fields (CRFs) is proposed to tackle the surface segmentation problem with end-to-end training. To the best of our knowledge, this is the first study to apply a 3-D neural network with a CRFs model for direct surface segmentation. Experiments carried out on NCI-ISBI 2013 MR prostate dataset and Medical Segmentation Decathlon Spleen dataset demonstrated promising segmentation results.