Yibing Wang

Shuang Li, Yibing Wang, Jian Gao et al.

Large-scale 3D photoacoustic (PA) imaging has become increasingly important for both clinical and pre-clinical applications. Limited by cost and system complexity, only systems with sparsely-distributed sensors can be widely implemented, which desires advanced reconstruction algorithms to reduce artifacts. However, high computing memory and time consumption of traditional iterative reconstruction (IR) algorithms is practically unacceptable for large-scale 3D PA imaging. Here, we propose a point cloud-based IR algorithm that reduces memory consumption by several orders, wherein the 3D PA scene is modeled as a series of Gaussian-distributed spherical sources stored in form of point cloud. During the IR process, not only are properties of each Gaussian source, including its peak intensity (initial pressure value), standard deviation (size) and mean (position) continuously optimized, but also each Gaussian source itself adaptively undergoes destroying, splitting, and duplication along the gradient direction. This method, named the sliding Gaussian ball adaptive growth (SlingBAG) algorithm, enables high-quality large-scale 3D PA reconstruction with fast iteration and extremely low memory usage. We validated SlingBAG algorithm in both simulation study and in vivo animal experiments. The source code and data for SlingBAG, along with supplementary materials and demonstration videos, are now available in the following GitHub repository: https://github.com/JaegerCQ/SlingBAG.

Shuang Li, Jian Gao, Chulhong Kim et al.

Three-dimensional (3D) handheld photoacoustic tomography typically relies on bulky and expensive external positioning sensors to correct motion artifacts, which severely limits its clinical flexibility and accessibility. To address this challenge, we present PA-SFM, a tracker-free framework that leverages exclusively single-modality photoacoustic data for both sensor pose recovery and high-fidelity 3D reconstruction via differentiable acoustic radiation modeling. Unlike traditional structure-from-motion (SFM) methods based on visual features, PA-SFM integrates the acoustic wave equation into a differentiable programming pipeline. By leveraging a high-performance, GPU-accelerated acoustic radiation kernel, the framework simultaneously optimizes the 3D photoacoustic source distribution and the sensor array pose via gradient descent. To ensure robust convergence in freehand scenarios, we introduce a coarse-to-fine optimization strategy that incorporates geometric consistency checks and rigid-body constraints to eliminate motion outliers. We validated the proposed method through both numerical simulations and in-vivo rat experiments. The results demonstrate that PA-SFM achieves sub-millimeter positioning accuracy and restores high-resolution 3D vascular structures comparable to ground-truth benchmarks, offering a low-cost, software-defined solution for clinical freehand photoacoustic imaging. The source code is publicly available at \href{https://github.com/JaegerCQ/PA-SFM}{https://github.com/JaegerCQ/PA-SFM}.

Shuang Li, Yibing Wang, Jian Gao et al.

High-quality three-dimensional (3D) photoacoustic imaging (PAI) is gaining increasing attention in clinical applications. To address the challenges of limited space and high costs, irregular geometric transducer arrays that conform to specific imaging regions are promising for achieving high-quality 3D PAI with fewer transducers. However, traditional iterative reconstruction algorithms struggle with irregular array configurations, suffering from high computational complexity, substantial memory requirements, and lengthy reconstruction times. In this work, we introduce SlingBAG Pro, an advanced reconstruction algorithm based on the point cloud iteration concept of the Sliding ball adaptive growth (SlingBAG) method, while extending its compatibility to arbitrary array geometries. SlingBAG Pro maintains high reconstruction quality, reduces the number of required transducers, and employs a hierarchical optimization strategy that combines zero-gradient filtering with progressively increased temporal sampling rates during iteration. This strategy rapidly removes redundant spatial point clouds, accelerates convergence, and significantly shortens overall reconstruction time. Compared to the original SlingBAG algorithm, SlingBAG Pro achieves up to a 2.2-fold speed improvement in point cloud-based 3D PA reconstruction under irregular array geometries. The proposed method is validated through both simulation and in vivo mouse experiments, and the source code is publicly available at https://github.com/JaegerCQ/SlingBAG_Pro.

Jiajun Liu, Yibing Wang, Hanghang Ma et al.

Rapid advancements have been made in extending Large Language Models (LLMs) to Large Multi-modal Models (LMMs). However, extending input modality of LLMs to video data remains a challenging endeavor, especially for long videos. Due to insufficient access to large-scale high-quality video data and the excessive compression of visual features, current methods exhibit limitations in effectively processing long videos. In this paper, we introduce Kangaroo, a powerful Video LMM aimed at addressing these challenges. Confronted with issue of inadequate training data, we develop a data curation system to build a large-scale dataset with high-quality annotations for vision-language pre-training and instruction tuning. In addition, we design a curriculum training pipeline with gradually increasing resolution and number of input frames to accommodate long videos. Evaluation results demonstrate that, with 8B parameters, Kangaroo achieves state-of-the-art performance across a variety of video understanding benchmarks while exhibiting competitive results on others. Particularly, on benchmarks specialized for long videos, Kangaroo excels some larger models with over 10B parameters and proprietary models.

Kaituo Feng, Kaixiong Gong, Bohao Li et al.

Inspired by DeepSeek-R1's success in eliciting reasoning abilities through rule-based reinforcement learning (RL), we introduce Video-R1 as the first attempt to systematically explore the R1 paradigm for incentivizing video reasoning within multimodal large language models (MLLMs). However, directly applying RL training with the GRPO algorithm to video reasoning presents two primary challenges: (i) a lack of temporal modeling for video reasoning, and (ii) the scarcity of high-quality video-reasoning data. To address these issues, we first propose the T-GRPO algorithm, which encourages models to utilize temporal information in videos for reasoning. Additionally, instead of relying solely on video data, we incorporate high-quality image-reasoning data into the training process. We have constructed two datasets: Video-R1-CoT-165k for SFT cold start and Video-R1-260k for RL training, both comprising image and video data. Experimental results demonstrate that Video-R1 achieves significant improvements on video reasoning benchmarks such as VideoMMMU and VSI-Bench, as well as on general video benchmarks including MVBench and TempCompass, etc. Notably, Video-R1-7B attains a 37.1% accuracy on video spatial reasoning benchmark VSI-bench, surpassing the commercial proprietary model GPT-4o. All code, models, and data are released in: https://github.com/tulerfeng/Video-R1.

Qishen Zhou, Yifan Zhang, Michail A. Makridis et al.

Inferring network-wide traffic states from sparse observations with high accuracy and trustworthy uncertainty quantification is essential for intelligent transportation systems, yet it remains challenging due to the underdetermined nature of the problem, multifaceted disturbances in sensing networks, and the inherent conflicts among multiple inference sub-tasks when modeled jointly. We propose the Task-Aware Attentive Neural Process (TA-ANP), a unified probabilistic framework for resilient and trustworthy global traffic state inference (GTSI) by fusing floating car data (FCD) with sparse fixed-detector measurements. By casting GTSI as a stochastic process, TA-ANP leverages the meta-learning properties of neural processes to adapt rapidly to changes in sensing configurations without retraining. A task-aware multi-query attention module with distinct spatiotemporal inductive biases is introduced to jointly handle three GTSI sub-tasks, while mitigating cross-task interference. For uncertainty quantification, we combine neural processes with Monte Carlo Dropout to capture both aleatoric and epistemic uncertainty. To support metropolis-scale evaluation, we construct the Metropolitan Multi-Source Traffic Dataset (MMTD), integrating fixed-loop sensor measurements, FCD statistics, and OpenStreetMap road-network data over an urban network of 2,371 road segments. Experiments on MMTD show that TA-ANP achieves state-of-the-art performance across all sub-tasks under deterministic and probabilistic metrics. The resulting well-calibrated uncertainties enable more efficient fixed-sensor placement with fewer sensor deployments. Under a Damage-Repair-Addition sensing lifecycle, TA-ANP demonstrates superior resilience in terms of disturbance absorption, performance recovery, and adaptability to unseen sensing configurations.

Kaixiong Gong, Kaituo Feng, Bohao Li et al.

Recently, multimodal large language models (MLLMs), such as GPT-4o, Gemini 1.5 Pro, and Reka Core, have expanded their capabilities to include vision and audio modalities. While these models demonstrate impressive performance across a wide range of audio-visual applications, our proposed DeafTest reveals that MLLMs often struggle with simple tasks humans find trivial: 1) determining which of two sounds is louder, and 2) determining which of two sounds has a higher pitch. Motivated by these observations, we introduce AV-Odyssey Bench, a comprehensive audio-visual benchmark designed to assess whether those MLLMs can truly understand the audio-visual information. This benchmark encompasses 4,555 carefully crafted problems, each incorporating text, visual, and audio components. To successfully infer answers, models must effectively leverage clues from both visual and audio inputs. To ensure precise and objective evaluation of MLLM responses, we have structured the questions as multiple-choice, eliminating the need for human evaluation or LLM-assisted assessment. We benchmark a series of closed-source and open-source models and summarize the observations. By revealing the limitations of current models, we aim to provide useful insight for future dataset collection and model development.

Shuang Li, Yibing Wang, Jian Gao et al.

Large-scale dynamic three-dimensional (3D) photoacoustic imaging (PAI) is significantly important in clinical applications. In practical implementations, large-scale 3D real-time PAI systems typically utilize sparse two-dimensional (2D) sensor arrays with certain angular deficiencies, necessitating advanced iterative reconstruction (IR) algorithms to achieve quantitative PAI and reduce reconstruction artifacts. However, for existing IR algorithms, multi-frame 3D reconstruction leads to extremely high memory consumption and prolonged computation time, with limited consideration of the spatial-temporal continuity between data frames. Here, we propose a novel method, named the 4D sliding Gaussian ball adaptive growth (4D SlingBAG) algorithm, based on the current point cloud-based IR algorithm sliding Gaussian ball adaptive growth (SlingBAG), which has minimal memory consumption among IR methods. Our 4D SlingBAG method applies spatial-temporal coupled deformation functions to each Gaussian sphere in point cloud, thus explicitly learning the deformations features of the dynamic 3D PA scene. This allows for the efficient representation of various physiological processes (such as pulsation) or external pressures (e.g., blood perfusion experiments) contributing to changes in vessel morphology and blood flow during dynamic 3D PAI, enabling highly efficient IR for dynamic 3D PAI. Simulation experiments demonstrate that 4D SlingBAG achieves high-quality dynamic 3D PA reconstruction. Compared to performing reconstructions by using SlingBAG algorithm individually for each frame, our method significantly reduces computational time and keeps a extremely low memory consumption. The project for 4D SlingBAG can be found in the following GitHub repository: \href{https://github.com/JaegerCQ/4D-SlingBAG}{https://github.com/JaegerCQ/4D-SlingBAG}.

Shuang Li, Qian Chen, Chulhong Kim et al.

Photoacoustic imaging (PAI) uniquely combines optical contrast with the penetration depth of ultrasound, making it critical for clinical applications. However, the quality of 3D PAI is often degraded due to reconstruction artifacts caused by the sparse and angle-limited configuration of detector arrays. Existing iterative or deep learning-based methods are either time-consuming or require large training datasets, significantly limiting their practical application. Here, we propose Zero-Shot Artifact2Artifact (ZS-A2A), a zero-shot self-supervised artifact removal method based on a super-lightweight network, which leverages the fact that reconstruction artifacts are sensitive to irregularities caused by data loss. By introducing random perturbations to the acquired PA data, it spontaneously generates subset data, which in turn stimulates the network to learn the artifact patterns in the reconstruction results, thus enabling zero-shot artifact removal. This approach requires neither training data nor prior knowledge of the artifacts, and is capable of artifact removal for 3D PAI. For maximum amplitude projection (MAP) images or slice images in 3D PAI acquired with arbitrarily sparse or angle-limited detector arrays, ZS-A2A employs a self-incentive strategy to complete artifact removal and improves the Contrast-to-Noise Ratio (CNR). We validated ZS-A2A in both simulation study and $ in\ vivo $ animal experiments. Results demonstrate that ZS-A2A achieves state-of-the-art (SOTA) performance compared to existing zero-shot methods, and for the $ in\ vivo $ rat liver, ZS-A2A improves CNR from 17.48 to 43.46 in just 8 seconds. The project for ZS-A2A will be available in the following GitHub repository: https://github.com/JaegerCQ/ZS-A2A.

Zigang Geng, Yibing Wang, Yeyao Ma et al.

Numerous efforts have been made to extend the ``next token prediction'' paradigm to visual contents, aiming to create a unified approach for both image generation and understanding. Nevertheless, attempts to generate images through autoregressive modeling with discrete tokens have been plagued by issues such as low visual fidelity, distorted outputs, and failure to adhere to complex instructions when rendering intricate details. These shortcomings are likely attributed to cumulative errors during autoregressive inference or information loss incurred during the discretization process. Probably due to this challenge, recent research has increasingly shifted toward jointly training image generation with diffusion objectives and language generation with autoregressive objectives, moving away from unified modeling approaches. In this work, we demonstrate that reinforcement learning can effectively mitigate artifacts and largely enhance the generation quality of a discrete autoregressive modeling method, thereby enabling seamless integration of image and language generation. Our framework comprises a semantic image tokenizer, a unified autoregressive model for both language and images, and an offline diffusion decoder for image generation, termed X-Omni. X-Omni achieves state-of-the-art performance in image generation tasks using a 7B language model, producing images with high aesthetic quality while exhibiting strong capabilities in following instructions and rendering long texts.

Qishen Zhou, Yifan Zhang, Michail A. Makridis et al.

Given a partially observed road network, how can we predict the traffic state of unobserved locations? While deep learning approaches show exceptional performance in traffic prediction, most assume sensors at all locations of interest, which is impractical due to financial constraints. Furthermore, these methods typically require costly retraining when sensor configurations change. We propose MoGERNN, an inductive spatio-temporal graph representation model, to address these challenges. Inspired by the Mixture of Experts approach in Large Language Models, we introduce a Mixture of Graph Expert (MoGE) block to model complex spatial dependencies through multiple graph message aggregators and a sparse gating network. This block estimates initial states for unobserved locations, which are then processed by a GRU-based Encoder-Decoder that integrates a graph message aggregator to capture spatio-temporal dependencies and predict future states. Experiments on two real-world datasets show MoGERNN consistently outperforms baseline methods for both observed and unobserved locations. MoGERNN can accurately predict congestion evolution even in areas without sensors, offering valuable information for traffic management. Moreover, MoGERNN is adaptable to dynamic sensing networks, maintaining competitive performance even compared to its retrained counterpart. Tests with different numbers of available sensors confirm its consistent superiority, and ablation studies validate the effectiveness of its key modules.

Tianren Ma, Mu Zhang, Yibing Wang et al.

Optimizing discrete diffusion model (DDM) with rewards remains a challenge: the non-autoregressive paradigm makes importance sampling intractable and rollout complex, puzzling reinforcement learning methods such as Group Relative Policy Optimization (GRPO). In this study, we introduce MaskGRPO, the first viable approach to enable scalable multimodal reinforcement learning in discrete diffusion with effective importance sampling and modality-specific adaptations. To this end, we first clarify the theoretical foundation for DDMs, which facilitates building an importance estimator that captures valuable token fluctuation for gradient updates. We then delicately tailored the rollout method for visual sequences, which yields diverse completions and reliable optimization gradients. Upon math reasoning, coding, and visual generation benchmarks, MaskGRPO brings more stable and efficient updates, leading to stronger reasoning performance and better generation quality. This study establishes MaskGRPO as a systematic policy optimization approach and the first practical way for discretized visual diffusion.

Yibing Wang, Shuang Li, Tingting Huang et al.

Although the iterative reconstruction (IR) algorithm can substantially correct reconstruction artifacts in photoacoustic (PA) computed tomography (PACT), it suffers from long reconstruction times, especially for large-scale three-dimensional (3D) imaging in which IR takes hundreds of seconds to hours. The computing burden severely limits the practical applicability of IR algorithms. In this work, we proposed an ultrafast IR method for 3D PACT, called Gaussian-kernel-based Ultrafast 3D Photoacoustic Iterative Reconstruction (GPAIR), which achieves orders-of-magnitude acceleration in computing. GPAIR transforms traditional spatial grids with continuous isotropic Gaussian kernels. By deriving analytical closed-form expression for pressure waves and implementing powerful GPU-accelerated differentiable Triton operators, GPAIR demonstrates extraordinary ultrafast sub-second reconstruction speed for 3D targets containing 8.4 million voxels in animal experiments. This revolutionary ultrafast image reconstruction enables near-real-time large-scale 3D PA reconstruction, significantly advancing 3D PACT toward clinical applications.

Hongxin Yu, Yibing Wang, Fengyue Jin et al.

Traffic state estimation (TSE) falls methodologically into three categories: model-driven, data-driven, and model-data dual-driven. Model-driven TSE relies on macroscopic traffic flow models originated from hydrodynamics. Data-driven TSE leverages historical sensing data and employs statistical models or machine learning methods to infer traffic state. Model-data dual-driven traffic state estimation attempts to harness the strengths of both aspects to achieve more accurate TSE. From the perspective of mathematical operator theory, TSE can be viewed as a type of operator that maps available measurements of inerested traffic state into unmeasured traffic state variables in real time. For the first time this paper proposes to study real-time freeway TSE in the idea of physics-informed deep operator network (PI-DeepONet), which is an operator-oriented architecture embedding traffic flow models based on deep neural networks. The paper has developed an extended architecture from the original PI-DeepONet. The extended architecture is featured with: (1) the acceptance of 2-D data input so as to support CNN-based computations; (2) the introduction of a nonlinear expansion layer, an attention mechanism, and a MIMO mechanism; (3) dedicated neural network design for adaptive identification of traffic flow model parameters. A traffic state estimator built on the basis of this extended PI-DeepONet architecture was evaluated with respect to a short freeway stretch of NGSIM and a large-scale urban expressway in China, along with other four baseline TSE methods. The evaluation results demonstrated that this novel TSE method outperformed the baseline methods with high-precision estimation results of flow and mean speed.

Qishen Zhou, Yifan Zhang, Michail A. Makridis et al.

Network-wide Traffic State Estimation (TSE), which aims to infer a complete image of network traffic states with sparsely deployed sensors, plays a vital role in intelligent transportation systems. With the development of data-driven methods, traffic dynamics modeling has advanced significantly. However, TSE poses fundamental challenges for data-driven approaches, since historical patterns cannot be learned locally at sensor-free segments. Although inductive graph learning shows promise in estimating states at locations without sensor, existing methods typically handle unobserved locations by filling them with zeros, introducing bias to the sensitive graph message propagation. The recently proposed Dirichlet Energy-based Feature Propagation (DEFP) method achieves State-Of-The-Art (SOTA) performance in unobserved node classification by eliminating the need for zero-filling. However, applying it to TSE faces three key challenges: inability to handle directed traffic networks, strong assumptions in traffic spatial correlation modeling, and overlooks distinct propagation rules of different patterns (e.g., congestion and free flow). We propose DGAE, a novel inductive graph representation model that addresses these challenges through theoretically derived DEFP for Directed graph (DEFP4D), enhanced spatial representation learning via DEFP4D-guided latent space encoding, and physics-guided propagation mechanisms that separately handles congested and free-flow patterns. Experiments on three traffic datasets demonstrate that DGAE outperforms existing SOTA methods and exhibits strong cross-city transferability. Furthermore, DEFP4D can serve as a standalone lightweight solution, showing superior performance under extremely sparse sensor conditions.

Yu Zhang, Shuang Li, Yibing Wang et al.

Photoacoustic imaging (PAI) suffers from inherent limitations that can degrade the quality of reconstructed results, such as noise, artifacts and incomplete data acquisition caused by sparse sampling or partial array detection. In this study, we proposed a new optimization method for both two-dimensional (2D) and three-dimensional (3D) PAI reconstruction results, called the regularized iteration method with shape prior. The shape prior is a probability matrix derived from the reconstruction results of multiple sets of random partial array signals in a computational imaging system using any reconstruction algorithm, such as Delay-and-Sum (DAS) and Back-Projection (BP). In the probability matrix, high-probability locations indicate high consistency among multiple reconstruction results at those positions, suggesting a high likelihood of representing the true imaging results. In contrast, low-probability locations indicate higher randomness, leaning more towards noise or artifacts. As a shape prior, this probability matrix guides the iteration and regularization of the entire array signal reconstruction results using the original reconstruction algorithm (the same algorithm for processing random partial array signals). The method takes advantage of the property that the similarity of the object to be imitated is higher than that of noise or artifact in the results reconstructed by multiple sets of random partial array signals of the entire imaging system. The probability matrix is taken as a prerequisite for improving the original reconstruction results, and the optimizer is used to further iterate the imaging results to remove noise and artifacts and improve the imaging fidelity. Especially in the case involving sparse view which brings more artifacts, the effect is remarkable. Simulation and real experiments have both demonstrated the superiority of this method.

Longqi Yang, Yibing Wang, Zhisong Pan et al.

Network anomaly detection is still a vibrant research area. As the fast growth of network bandwidth and the tremendous traffic on the network, there arises an extremely challengeable question: How to efficiently and accurately detect the anomaly on multiple traffic? In multi-task learning, the traffic consisting of flows at different time periods is considered as a task. Multiple tasks at different time periods performed simultaneously to detect anomalies. In this paper, we apply the multi-task feature selection in network anomaly detection area which provides a powerful method to gather information from multiple traffic and detect anomalies on it simultaneously. In particular, the multi-task feature selection includes the well-known l1-norm based feature selection as a special case given only one task. Moreover, we show that the multi-task feature selection is more accurate by utilizing more information simultaneously than the l1-norm based method. At the evaluation stage, we preprocess the raw data trace from trans-Pacific backbone link between Japan and the United States, label with anomaly communities, and generate a 248-feature dataset. We show empirically that the multi-task feature selection outperforms independent l1-norm based feature selection on real traffic dataset.