Hairong Lv

Chengbin Hou, Xinyu Lin, Hanhui Huang et al.

Identification of fossil species is crucial to evolutionary studies. Recent advances from deep learning have shown promising prospects in fossil image identification. However, the quantity and quality of labeled fossil images are often limited due to fossil preservation, conditioned sampling, and expensive and inconsistent label annotation by domain experts, which pose great challenges to training deep learning based image classification models. To address these challenges, we follow the idea of the wisdom of crowds and propose a multiview ensemble framework, which collects Original (O), Gray (G), and Skeleton (S) views of each fossil image reflecting its different characteristics to train multiple base models, and then makes the final decision via soft voting. Experiments on the largest fusulinid dataset with 2400 images show that the proposed OGS consistently outperforms baselines (using a single model for each view), and obtains superior or comparable performance compared to OOO (using three base models for three the same Original views). Besides, as the training data decreases, the proposed framework achieves more gains. While considering the identification consistency estimation with respect to human experts, OGS receives the highest agreement with the original labels of dataset and with the re-identifications of two human experts. The validation performance provides a quantitative estimation of consistency across different experts and genera. We conclude that the proposed framework can present state-of-the-art performance in the fusulinid fossil identification case study. This framework is designed for general fossil identification and it is expected to see applications to other fossil datasets in future work. The source code is publicly available at https://github.com/houchengbin/Fossil-Image-Identification to benefit future research in fossil image identification.

Feng Wang, Manling Li, Xudong Lin et al.

Recent advances in pre-training vision-language models like CLIP have shown great potential in learning transferable visual representations. Nonetheless, for downstream inference, CLIP-like models suffer from either 1) degraded accuracy and robustness in the case of inaccurate text descriptions during retrieval-based inference (the challenge for zero-shot protocol); or 2) breaking the well-established vision-language alignment (the challenge for linear probing). To address them, we propose Decomposed Feature Prompting (DeFo). DeFo leverages a flexible number of learnable embeddings as textual input while maintaining the vision-language dual-model architecture, which enables the model to learn decomposed visual features with the help of feature-level textual prompts. We further use an additional linear layer to perform classification, allowing a scalable size of language inputs. Our empirical study shows DeFo's significance in improving the vision-language models. For example, DeFo obtains 73.2% test accuracy on ImageNet with a ResNet-50 backbone without tuning any pretrained weights of both the vision and language encoder, outperforming zero-shot CLIP by a large margin of 15.0%, and outperforming state-of-the-art vision-language prompt tuning method by 7.6%.

Yunheng Shen, Haoxiang Wang, Hairong Lv

Federated learning aims to learn a global model collaboratively while the training data belongs to different clients and is not allowed to be exchanged. However, the statistical heterogeneity challenge on non-IID data, such as class imbalance in classification, will cause client drift and significantly reduce the performance of the global model. This paper proposes a simple and effective approach named FedShift which adds the shift on the classifier output during the local training phase to alleviate the negative impact of class imbalance. We theoretically prove that the classifier shift in FedShift can make the local optimum consistent with the global optimum and ensure the convergence of the algorithm. Moreover, our experiments indicate that FedShift significantly outperforms the other state-of-the-art federated learning approaches on various datasets regarding accuracy and communication efficiency.

Tianyu Zhang, Chengbin Hou, Rui Jiang et al.

Node Importance Estimation (NIE) is a task of inferring importance scores of the nodes in a graph. Due to the availability of richer data and knowledge, recent research interests of NIE have been dedicating to knowledge graphs for predicting future or missing node importance scores. Existing state-of-the-art NIE methods train the model by available labels, and they consider every interested node equally before training. However, the nodes with higher importance often require or receive more attention in real-world scenarios, e.g., people may care more about the movies or webpages with higher importance. To this end, we introduce Label Informed ContrAstive Pretraining (LICAP) to the NIE problem for being better aware of the nodes with high importance scores. Specifically, LICAP is a novel type of contrastive learning framework that aims to fully utilize the continuous labels to generate contrastive samples for pretraining embeddings. Considering the NIE problem, LICAP adopts a novel sampling strategy called top nodes preferred hierarchical sampling to first group all interested nodes into a top bin and a non-top bin based on node importance scores, and then divide the nodes within top bin into several finer bins also based on the scores. The contrastive samples are generated from those bins, and are then used to pretrain node embeddings of knowledge graphs via a newly proposed Predicate-aware Graph Attention Networks (PreGAT), so as to better separate the top nodes from non-top nodes, and distinguish the top nodes within top bin by keeping the relative order among finer bins. Extensive experiments demonstrate that the LICAP pretrained embeddings can further boost the performance of existing NIE methods and achieve the new state-of-the-art performance regarding both regression and ranking metrics. The source code for reproducibility is available at https://github.com/zhangtia16/LICAP

Tianyu Zhang, Yuxiang Ren, Chengbin Hou et al.

Molecular property prediction is a crucial foundation for drug discovery. In recent years, pre-trained deep learning models have been widely applied to this task. Some approaches that incorporate prior biological domain knowledge into the pre-training framework have achieved impressive results. However, these methods heavily rely on biochemical experts, and retrieving and summarizing vast amounts of domain knowledge literature is both time-consuming and expensive. Large Language Models (LLMs) have demonstrated remarkable performance in understanding and efficiently providing general knowledge. Nevertheless, they occasionally exhibit hallucinations and lack precision in generating domain-specific knowledge. Conversely, Domain-specific Small Models (DSMs) possess rich domain knowledge and can accurately calculate molecular domain-related metrics. However, due to their limited model size and singular functionality, they lack the breadth of knowledge necessary for comprehensive representation learning. To leverage the advantages of both approaches in molecular property prediction, we propose a novel Molecular Graph representation learning framework that integrates Large language models and Domain-specific small models (MolGraph-LarDo). Technically, we design a two-stage prompt strategy where DSMs are introduced to calibrate the knowledge provided by LLMs, enhancing the accuracy of domain-specific information and thus enabling LLMs to generate more precise textual descriptions for molecular samples. Subsequently, we employ a multi-modal alignment method to coordinate various modalities, including molecular graphs and their corresponding descriptive texts, to guide the pre-training of molecular representations. Extensive experiments demonstrate the effectiveness of the proposed method.

Wenhao Mao, Chengbin Hou, Tianyu Zhang et al.

Offering rich contexts to Large Language Models (LLMs) has shown to boost the performance in various tasks, but the resulting longer prompt would increase the computational cost and might exceed the input limit of LLMs. Recently, some prompt compression methods have been suggested to shorten the length of prompts by using language models to generate shorter prompts or by developing computational models to select important parts of original prompt. The generative compression methods would suffer from issues like hallucination, while the selective compression methods have not involved linguistic rules and overlook the global structure of prompt. To this end, we propose a novel selective compression method called PartPrompt. It first obtains a parse tree for each sentence based on linguistic rules, and calculates local information entropy for each node in a parse tree. These local parse trees are then organized into a global tree according to the hierarchical structure such as the dependency of sentences, paragraphs, and sections. After that, the root-ward propagation and leaf-ward propagation are proposed to adjust node values over the global tree. Finally, a recursive algorithm is developed to prune the global tree based on the adjusted node values. The experiments show that PartPrompt receives the state-of-the-art performance across various datasets, metrics, compression ratios, and target LLMs for inference. The in-depth ablation studies confirm the effectiveness of designs in PartPrompt, and other additional experiments also demonstrate its superiority in terms of the coherence of compressed prompts and in the extreme long prompt scenario.

Xinyu Lin, Tianyu Zhang, Chengbin Hou et al.

Node Importance Estimation (NIE) is a task that quantifies the importance of node in a graph. Recent research has investigated to exploit various information from Knowledge Graphs (KGs) to estimate node importance scores. However, the semantic information in KGs could be insufficient, missing, and inaccurate, which would limit the performance of existing NIE models. To address these issues, we leverage Large Language Models (LLMs) for semantic augmentation thanks to the LLMs' extra knowledge and ability of integrating knowledge from both LLMs and KGs. To this end, we propose the LLMs Empowered Node Importance Estimation (LENIE) method to enhance the semantic information in KGs for better supporting NIE tasks. To our best knowledge, this is the first work incorporating LLMs into NIE. Specifically, LENIE employs a novel clustering-based triplet sampling strategy to extract diverse knowledge of a node sampled from the given KG. After that, LENIE adopts the node-specific adaptive prompts to integrate the sampled triplets and the original node descriptions, which are then fed into LLMs for generating richer and more precise augmented node descriptions. These augmented descriptions finally initialize node embeddings for boosting the downstream NIE model performance. Extensive experiments demonstrate LENIE's effectiveness in addressing semantic deficiencies in KGs, enabling more informative semantic augmentation and enhancing existing NIE models to achieve the state-of-the-art performance. The source code of LENIE is freely available at \url{https://github.com/XinyuLin-FZ/LENIE}.

Haoran Feng, Zehuan Huang, Lin Li et al.

Personalized image generation aims to produce images of user-specified concepts while enabling flexible editing. Recent training-free approaches, while exhibit higher computational efficiency than training-based methods, struggle with identity preservation, applicability, and compatibility with diffusion transformers (DiTs). In this paper, we uncover the untapped potential of DiT, where simply replacing denoising tokens with those of a reference subject achieves zero-shot subject reconstruction. This simple yet effective feature injection technique unlocks diverse scenarios, from personalization to image editing. Building upon this observation, we propose \textbf{Personalize Anything}, a training-free framework that achieves personalized image generation in DiT through: 1) timestep-adaptive token replacement that enforces subject consistency via early-stage injection and enhances flexibility through late-stage regularization, and 2) patch perturbation strategies to boost structural diversity. Our method seamlessly supports layout-guided generation, multi-subject personalization, and mask-controlled editing. Evaluations demonstrate state-of-the-art performance in identity preservation and versatility. Our work establishes new insights into DiTs while delivering a practical paradigm for efficient personalization.

Jiarui Song, Yunheng Shen, Chengbin Hou et al.

Personalized Federated Learning (PFL) aims to address the statistical heterogeneity of data across clients by learning the personalized model for each client. Among various PFL approaches, the personalized aggregation-based approach conducts parameter aggregation in the server-side aggregation phase to generate personalized models, and focuses on learning appropriate collaborative relationships among clients for aggregation. However, the collaborative relationships vary in different scenarios and even at different stages of the FL process. To this end, we propose Personalized Federated Learning with Attentive Graph HyperNetworks (FedAGHN), which employs Attentive Graph HyperNetworks (AGHNs) to dynamically capture fine-grained collaborative relationships and generate client-specific personalized initial models. Specifically, AGHNs empower graphs to explicitly model the client-specific collaborative relationships, construct collaboration graphs, and introduce tunable attentive mechanism to derive the collaboration weights, so that the personalized initial models can be obtained by aggregating parameters over the collaboration graphs. Extensive experiments can demonstrate the superiority of FedAGHN. Moreover, a series of visualizations are presented to explore the effectiveness of collaboration graphs learned by FedAGHN.

Ziming Tang, Chengbin Hou, Tianyu Zhang et al.

Parkinson's disease (PD) is one of the most common neurodegenerative disorder. PD telemonitoring emerges as a novel assessment modality enabling self-administered at-home tests of Unified Parkinson's Disease Rating Scale (UPDRS) scores, enhancing accessibility for PD patients. However, three types of noise would occur during measurements: (1) patient-induced measurement inaccuracies, (2) environmental noise, and (3) data packet loss during transmission, resulting in higher prediction errors. To address these challenges, NoRo, a noise-robust UPDRS prediction framework is proposed. First, the original speech features are grouped into ordered bins, based on the continuous values of a selected feature, to construct contrastive pairs. Second, the contrastive pairs are employed to train a multilayer perceptron encoder for generating noise-robust features. Finally, these features are concatenated with the original features as the augmented features, which are then fed into the UPDRS prediction models. Notably, we further introduces a novel evaluation approach with customizable noise injection module, and extensive experiments show that NoRo can successfully enhance the noise robustness of UPDRS prediction across various downstream prediction models under different noisy environments.

Feng Wang, Guoyizhe Wei, Qiao Liu et al.

Training multiple deep neural networks (DNNs) and averaging their outputs is a simple way to improve the predictive performance. Nevertheless, the multiplied training cost prevents this ensemble method to be practical and efficient. Several recent works attempt to save and ensemble the checkpoints of DNNs, which only requires the same computational cost as training a single network. However, these methods suffer from either marginal accuracy improvements due to the low diversity of checkpoints or high risk of divergence due to the cyclical learning rates they adopted. In this paper, we propose a novel method to ensemble the checkpoints, where a boosting scheme is utilized to accelerate model convergence and maximize the checkpoint diversity. We theoretically prove that it converges by reducing exponential loss. The empirical evaluation also indicates our proposed ensemble outperforms single model and existing ensembles in terms of accuracy and efficiency. With the same training budget, our method achieves 4.16% lower error on Cifar-100 and 6.96% on Tiny-ImageNet with ResNet-110 architecture. Moreover, the adaptive sample weights in our method make it an effective solution to address the imbalanced class distribution. In the experiments, it yields up to 5.02% higher accuracy over single EfficientNet-B0 on the imbalanced datasets.