Leong Hou U

Xin Wang, Zirui Chen, Haofen Wang et al.

Knowledge Representation Learning (KRL) is crucial for enabling applications of symbolic knowledge from Knowledge Graphs (KGs) to downstream tasks by projecting knowledge facts into vector spaces. Despite their effectiveness in modeling KG structural information, KRL methods are suffering from the sparseness of KGs. The rise of Large Language Models (LLMs) built on the Transformer architecture presents promising opportunities for enhancing KRL by incorporating textual information to address information sparsity in KGs. LLM-enhanced KRL methods, including three key approaches, encoder-based methods that leverage detailed contextual information, encoder-decoder-based methods that utilize a unified Seq2Seq model for comprehensive encoding and decoding, and decoder-based methods that utilize extensive knowledge from large corpora, have significantly advanced the effectiveness and generalization of KRL in addressing a wide range of downstream tasks. This work provides a broad overview of downstream tasks while simultaneously identifying emerging research directions in these evolving domains.

Wentao Zhang, Jingyuan Wang, Yifan Yang et al.

Electronic maps consist of diverse entities, such as points of interest (POIs), road networks, and land parcels, playing a vital role in applications like ITS and LBS. Map entity representation learning (MapRL) generates versatile and reusable data representations, providing essential tools for efficiently managing and utilizing map entity data. Despite the progress in MapRL, two key challenges constrain further development. First, existing research is fragmented, with models classified by the type of map entity, limiting the reusability of techniques across different tasks. Second, the lack of unified benchmarks makes systematic evaluation and comparison of models difficult. To address these challenges, we propose a novel taxonomy for MapRL that organizes models based on functional module-such as encoders, pre-training tasks, and downstream tasks-rather than by entity type. Building on this taxonomy, we present a taxonomy-driven library, VecCity, which offers easy-to-use interfaces for encoding, pre-training, fine-tuning, and evaluation. The library integrates datasets from nine cities and reproduces 21 mainstream MapRL models, establishing the first standardized benchmarks for the field. VecCity also allows users to modify and extend models through modular components, facilitating seamless experimentation. Our comprehensive experiments cover multiple types of map entities and evaluate 21 VecCity pre-built models across various downstream tasks. Experimental results demonstrate the effectiveness of VecCity in streamlining model development and provide insights into the impact of various components on performance. By promoting modular design and reusability, VecCity offers a unified framework to advance research and innovation in MapRL. The code is available at https://github.com/Bigscity-VecCity/VecCity.

Jiayang Wu, Jiale Zhou, Xingyi Zhang et al.

Accurate identification of protein active sites at the residue level is crucial for understanding protein function and advancing drug discovery. However, current methods face two critical challenges: vulnerability in single-instance prediction due to sparse training data, and inadequate modality reliability estimation that leads to performance degradation when unreliable modalities dominate fusion processes. To address these challenges, we introduce Multimodal Mixture-of-Experts with Retrieval Augmentation (MERA), the first retrieval-augmented framework for protein active site identification. MERA employs hierarchical multi-expert retrieval that dynamically aggregates contextual information from chain, sequence, and active-site perspectives through residue-level mixture-of-experts gating. To prevent modality degradation, we propose a reliability-aware fusion strategy based on Dempster-Shafer evidence theory that quantifies modality trustworthiness through belief mass functions and learnable discounting coefficients, enabling principled multimodal integration. Extensive experiments on ProTAD-Gen and TS125 datasets demonstrate that MERA achieves state-of-the-art performance, with 90% AUPRC on active site prediction and significant gains on peptide-binding site identification, validating the effectiveness of retrieval-augmented multi-expert modeling and reliability-guided fusion.

Yiheng Zhang, Kaiyan Zhao, Shaowu Wu et al.

Adaptive optimizers such as Adam have achieved great success in training large-scale models like large language models and diffusion models. However, they often generalize worse than non-adaptive methods, such as SGD on classical architectures like CNNs. We identify a key cause of this performance gap: adaptivity in pre-conditioners, which limits the optimizer's ability to adapt to diverse optimization landscapes. To address this, we propose Anon (Adaptivity Non-restricted Optimizer with Novel convergence technique), a novel optimizer with continuously tunable adaptivity in R, allowing it to interpolate between SGD-like and Adam-like behaviors and even extrapolate beyond both. To ensure convergence across the entire adaptivity spectrum, we introduce incremental delay update (IDU), a novel mechanism that is more flexible than AMSGrad's hard max-tracking strategy and enhances robustness to gradient noise. We theoretically establish convergence guarantees under both convex and non-convex settings. Empirically, Anon consistently outperforms state-of-the-art optimizers on representative image classification, diffusion, and language modeling tasks. These results demonstrate that adaptivity can serve as a valuable tunable design principle, and Anon provides the first unified and reliable framework capable of bridging the gap between classical and modern optimizers and surpassing their advantageous properties.

Yiheng Zhang, Yiming Wang, Kaiyan Zhao et al.

Proximal Policy Optimization (PPO) dominates deep RL but faces a fundamental dilemma. Its "hard clipping" mechanism discards valuable gradient information from outliers, leading to sample inefficiency. Conversely, removing clipping (as in SPO) exposes optimization to unbounded gradients, causing significant instability and hyperparameter sensitivity. To resolve this, we establish a Unified Trust Region Framework that generalizes existing objectives. Within this framework, we derive Anchored Neighborhood Optimization (ANO) based on a set of design principles. We identify that the failure of standard policy gradients stems from a misapplication of gradient influence on outliers. We propose the Redescending Influence Principle, a paradigm shift from monotonic penalties (SPO) and hard-thresholding (PPO) to dynamic outlier suppression, and prove its necessity for stability in high-variance stochastic optimization. Theoretically, we prove ANO possesses the minimal structural complexity required for robust optimization. Empirically, ANO achieves state-of-the-art performance on MuJoCo benchmarks, significantly outperforming PPO and SPO. Notably, ANO demonstrates superior stability, preventing policy collapse even under aggressive hyperparameters (e.g., learning rates 3x larger than standard) where PPO fails completely.

Zijie Zhou, Zhaoqi Lu, Xuekai Wei et al.

Graph Neural Networks (GNNs) are widely used in graph data mining tasks. Traditional GNNs follow a message passing scheme that can effectively utilize local and structural information. However, the phenomena of over-smoothing and over-squashing limit the receptive field in message passing processes. Graph Transformers were introduced to address these issues, achieving a global receptive field but suffering from the noise of irrelevant nodes and loss of structural information. Therefore, drawing inspiration from fine-grained token-based representation learning in Natural Language Processing (NLP), we propose the Structure-aware Multi-token Graph Transformer (Tokenphormer), which generates multiple tokens to effectively capture local and structural information and explore global information at different levels of granularity. Specifically, we first introduce the walk-token generated by mixed walks consisting of four walk types to explore the graph and capture structure and contextual information flexibly. To ensure local and global information coverage, we also introduce the SGPM-token (obtained through the Self-supervised Graph Pre-train Model, SGPM) and the hop-token, extending the length and density limit of the walk-token, respectively. Finally, these expressive tokens are fed into the Transformer model to learn node representations collaboratively. Experimental results demonstrate that the capability of the proposed Tokenphormer can achieve state-of-the-art performance on node classification tasks.

Kaiyan Zhao, Yiming Wang, Yuyang Chen et al.

Experience replay is widely used to improve learning efficiency in reinforcement learning by leveraging past experiences. However, existing experience replay methods, whether based on uniform or prioritized sampling, often suffer from low efficiency, particularly in real-world scenarios with high-dimensional state spaces. To address this limitation, we propose a novel approach, Efficient Diversity-based Experience Replay (EDER). EDER employs a determinantal point process to model the diversity between samples and prioritizes replay based on the diversity between samples. To further enhance learning efficiency, we incorporate Cholesky decomposition for handling large state spaces in realistic environments. Additionally, rejection sampling is applied to select samples with higher diversity, thereby improving overall learning efficacy. Extensive experiments are conducted on robotic manipulation tasks in MuJoCo, Atari games, and realistic indoor environments in Habitat. The results demonstrate that our approach not only significantly improves learning efficiency but also achieves superior performance in high-dimensional, realistic environments.

Weizhi Xian, Mingliang Zhou, Leong Hou U et al.

In this paper, we propose a Physical Imaging Guided perceptual framework for Underwater Image Quality Assessment (UIQA), termed PIGUIQA. First, we formulate UIQA as a comprehensive problem that considers the combined effects of direct transmission attenuation and backward scattering on image perception. By leveraging underwater radiative transfer theory, we systematically integrate physics-based imaging estimations to establish quantitative metrics for these distortions. Second, recognizing spatial variations in image content significance and human perceptual sensitivity to distortions, we design a module built upon a neighborhood attention mechanism for local perception of images. This module effectively captures subtle features in images, thereby enhancing the adaptive perception of distortions on the basis of local information. Third, by employing a global perceptual aggregator that further integrates holistic image scene with underwater distortion information, the proposed model accurately predicts image quality scores. Extensive experiments across multiple benchmarks demonstrate that PIGUIQA achieves state-of-the-art performance while maintaining robust cross-dataset generalizability. The implementation is publicly available at https://anonymous.4open.science/r/PIGUIQA-A465/

Rongqin Chen, Fan Mo, Pak Lon Ip et al.

Higher-order Graph Neural Networks (HOGNNs) based on the 2-FWL test achieve superior expressivity by modeling 2- and 3-node interactions, but at $\mathcal{O}(n^3)$ computational cost. However, this computational burden is typically mitigated by existing efficiency methods at the cost of reduced expressivity. We propose \textbf{Co-Sparsify}, a connectivity-aware sparsification framework that eliminates \emph{provably redundant} computations while preserving full 2-FWL expressive power. Our key insight is that 3-node interactions are expressively necessary only within \emph{biconnected components} -- maximal subgraphs where every pair of nodes lies on a cycle. Outside these components, structural relationships can be fully captured via 2-node message passing or global readout, rendering higher-order modeling unnecessary. Co-Sparsify restricts 2-node message passing to connected components and 3-node interactions to biconnected ones, removing computation without approximation or sampling. We prove that Co-Sparsified GNNs are as expressive as the 2-FWL test. Empirically, on PPGN, Co-Sparsify matches or exceeds accuracy on synthetic substructure counting tasks and achieves state-of-the-art performance on real-world benchmarks (ZINC, QM9). This study demonstrates that high expressivity and scalability are not mutually exclusive: principled, topology-guided sparsification enables powerful, efficient GNNs with theoretical guarantees.

Jingtian Ma, Jingyuan Wang, Leong Hou U

Road networks are critical infrastructures underpinning intelligent transportation systems and their related applications. Effective representation learning of road networks remains challenging due to the complex interplay between spatial structures and frequency characteristics in traffic patterns. Existing graph neural networks for modeling road networks predominantly fall into two paradigms: spatial-based methods that capture local topology but tend to over-smooth representations, and spectral-based methods that analyze global frequency components but often overlook localized variations. This spatial-spectral misalignment limits their modeling capacity for road networks exhibiting both coarse global trends and fine-grained local fluctuations. To bridge this gap, we propose HiFiNet, a novel hierarchical frequency-decomposition graph neural network that unifies spatial and spectral modeling. HiFiNet constructs a multi-level hierarchy of virtual nodes to enable localized frequency analysis, and employs a decomposition-updating-reconstruction framework with a topology-aware graph transformer to separately model and fuse low- and high-frequency signals. Theoretically justified and empirically validated on multiple real-world datasets across four downstream tasks, HiFiNet demonstrates superior performance and generalization ability in capturing effective road network representations.

Yuanyuan Yao, Yuhan Shi, Lu Chen et al.

Multivariate time series (MTS) anomaly detection identifies abnormal patterns where each timestamp contains multiple variables. Existing MTS anomaly detection methods fall into three categories: reconstruction-based, prediction-based, and classifier-based methods. However, these methods face two key challenges: (1) Unsupervised learning methods, such as reconstruction-based and prediction-based methods, rely on error thresholds, which can lead to inaccuracies; (2) Semi-supervised methods mainly model normal data and often underuse anomaly labels, limiting detection of subtle anomalies;(3) Supervised learning methods, such as classifier-based approaches, often fail to capture local relationships, incur high computational costs, and are constrained by the scarcity of labeled data. To address these limitations, we propose Moon, a supervised modality conversion-based multivariate time series anomaly detection framework. Moon enhances the efficiency and accuracy of anomaly detection while providing detailed anomaly analysis reports. First, Moon introduces a novel multivariate Markov Transition Field (MV-MTF) technique to convert numeric time series data into image representations, capturing relationships across variables and timestamps. Since numeric data retains unique patterns that cannot be fully captured by image conversion alone, Moon employs a Multimodal-CNN to integrate numeric and image data through a feature fusion model with parameter sharing, enhancing training efficiency. Finally, a SHAP-based anomaly explainer identifies key variables contributing to anomalies, improving interpretability. Extensive experiments on six real-world MTS datasets demonstrate that Moon outperforms six state-of-the-art methods by up to 93% in efficiency, 4% in accuracy and, 10.8% in interpretation performance.

Caihua Shan, Leong Hou U, Nikos Mamoulis et al.

Crowdsourcing can be used to determine a total order for an object set (e.g., the top-10 NBA players) based on crowd opinions. This ranking problem is often decomposed into a set of microtasks (e.g., pairwise comparisons). These microtasks are passed to a large number of workers and their answers are aggregated to infer the ranking. The number of microtasks depends on the budget allocated for the problem. Intuitively, the higher the number of microtask answers, the more accurate the ranking becomes. However, it is often hard to decide the budget required for an accurate ranking. We study how a ranking process can be terminated early, and yet achieve a high-quality ranking and great savings in the budget. We use statistical tools to estimate the quality of the ranking result at any stage of the crowdsourcing process and terminate the process as soon as the desired quality is achieved. Our proposed early-stopping module can be seamlessly integrated with most existing inference algorithms and task assignment methods. We conduct extensive experiments and show that our early-stopping module is better than other existing general stopping criteria. We also implement a prototype system to demonstrate the usability and effectiveness of our approach in practice.