3.8LGJul 4, 2023
Localized Data Work as a Precondition for Data-Centric ML: A Case Study of Full Lifecycle Crop Disease Identification in GhanaDarlington Akogo, Issah Samori, Cyril Akafia et al.
The Ghana Cashew Disease Identification with Artificial Intelligence (CADI AI) project demonstrates the importance of sound data work as a precondition for the delivery of useful, localized datacentric solutions for public good tasks such as agricultural productivity and food security. Drone collected data and machine learning are utilized to determine crop stressors. Data, model and the final app are developed jointly and made available to local farmers via a desktop application.
2.7IVOct 31, 2022
minoHealth.ai: A Clinical Evaluation Of Deep Learning Systems For the Diagnosis of Pleural Effusion and Cardiomegaly In Ghana, Vietnam and the United States of AmericaDarlington Akogo, Benjamin Dabo Sarkodie, Issah Abubakari Samori et al.
A rapid and accurate diagnosis of cardiomegaly and pleural effusion is of the utmost importance to reduce mortality and medical costs. Artificial Intelligence has shown promise in diagnosing medical conditions. With this study, we seek to evaluate how well Artificial Intelligence (AI) systems, developed my minoHealth AI Labs, will perform at diagnosing cardiomegaly and pleural effusion, using chest x-rays from Ghana, Vietnam and the USA, and how well AI systems will perform when compared with radiologists working in Ghana. The evaluation dataset used in this study contained 100 images randomly selected from three datasets. The Deep Learning models were further tested on a larger Ghanaian dataset containing five hundred and sixty one (561) samples. Two AI systems were then evaluated on the evaluation dataset, whilst we also gave the same chest x-ray images within the evaluation dataset to 4 radiologists, with 5 - 20 years experience, to diagnose independently. For cardiomegaly, minoHealth-ai systems scored Area under the Receiver operating characteristic Curve (AUC-ROC) of 0.9 and 0.97 while the AUC-ROC of individual radiologists ranged from 0.77 to 0.87. For pleural effusion, the minoHealth-ai systems scored 0.97 and 0.91 whereas individual radiologists scored between 0.75 and 0.86. On both conditions, the best performing AI model outperforms the best performing radiologist by about 10%. We also evaluate the specificity, sensitivity, negative predictive value (NPV), and positive predictive value (PPV) between the minoHealth-ai systems and radiologists.
2.4NEJul 26, 2020
A Preliminary Exploration into an Alternative CellLineNet: An Evolutionary ApproachAkwarandu Ugo Nwachuku, Xavier Lewis-Palmer, Darlington Ahiale Akogo
Within this paper, the exploration of an evolutionary approach to an alternative CellLineNet: a convolutional neural network adept at the classification of epithelial breast cancer cell lines, is presented. This evolutionary algorithm introduces control variables that guide the search of architectures in the search space of inverted residual blocks, bottleneck blocks, residual blocks and a basic 2x2 convolutional block. The promise of EvoCELL is predicting what combination or arrangement of the feature extracting blocks that produce the best model architecture for a given task. Therein, the performance of how the fittest model evolved after each generation is shown. The final evolved model CellLineNet V2 classifies 5 types of epithelial breast cell lines consisting of two human cancer lines, 2 normal immortalized lines, and 1 immortalized mouse line (MDA-MB-468, MCF7, 10A, 12A and HC11). The Multiclass Cell Line Classification Convolutional Neural Network extends our earlier work on a Binary Breast Cancer Cell Line Classification model. This paper presents an on-going exploratory approach to neural network architecture design and is presented for further study.
1.7CVAug 18, 2018
CellLineNet: End-to-End Learning and Transfer Learning For Multiclass Epithelial Breast cell Line Classification via a Convolutional Neural NetworkDarlington Ahiale Akogo, Vincent Appiah, Xavier-Lewis Palmer
Computer Vision for Analyzing and Classifying cells and tissues often require rigorous lab procedures and so automated Computer Vision solutions have been sought. Most work in such field usually requires Feature Extractions before the analysis of such features via Machine Learning and Machine Vision algorithms. We developed a Convolutional Neural Network that classifies 5 types of epithelial breast cell lines comprised of two human cancer lines, 2 normal immortalized lines, and 1 immortalized mouse line (MDA-MB-468, MCF7, 10A, 12A and HC11) without requiring feature extraction. The Multiclass Cell Line Classification Convolutional Neural Network extends our earlier work on a Binary Breast Cancer Cell Line Classification model. CellLineNet is 31-layer Convolutional Neural Network trained, validated and tested on a 3,252 image dataset of 5 types of Epithelial Breast cell Lines (MDA-MB-468, MCF7, 10A, 12A and HC11) in an end-to-end fashion. End-to-End Learning enables CellLineNet to identify and learn on its own, visual features and regularities most important to Breast Cancer Cell Line Classification from the dataset of images. Using Transfer Learning, the 28-layer MobileNet Convolutional Neural Network architecture with pre-trained ImageNet weights is extended and fine tuned to the Multiclass Epithelial Breast cell Line Classification problem. CellLineNet simply requires an imaged Cell Line as input and it outputs the type of breast epithelial cell line (MDA-MB-468, MCF7, 10A, 12A or HC11) as predicted probabilities for the 5 classes. CellLineNet scored a 96.67% Accuracy.
1.7CVJul 25, 2018
End-to-End Learning via a Convolutional Neural Network for Cancer Cell Line ClassificationDarlington Ahiale Akogo, Xavier-Lewis Palmer
Computer Vision for automated analysis of cells and tissues usually include extracting features from images before analyzing such features via various Machine Learning and Machine Vision algorithms. We developed a Convolutional Neural Network model that classifies MDA-MB-468 and MCF7 breast cancer cells via brightfield microscopy images without the need of any prior feature extraction. Our 6-layer Convolutional Neural Network is directly trained, validated and tested on 1,241 images of MDA-MB-468 and MCF7 breast cancer cell line in an end-to-end fashion, allowing a system to distinguish between different cancer cell types. The model takes in as input imaged breast cancer cell line and then outputs the cell line type (MDA-MB-468 or MCF7) as predicted probabilities between the two classes. Our model scored a 99% Accuracy.
2.5CVMay 17, 2018
ScaffoldNet: Detecting and Classifying Biomedical Polymer-Based Scaffolds via a Convolutional Neural NetworkDarlington Ahiale Akogo, Xavier-Lewis Palmer
We developed a Convolutional Neural Network model to identify and classify Airbrushed (alternatively known as Blow-spun), Electrospun and Steel Wire scaffolds. Our model ScaffoldNet is a 6-layer Convolutional Neural Network trained and tested on 3,043 images of Airbrushed, Electrospun and Steel Wire scaffolds. The model takes in as input an imaged scaffold and then outputs the scaffold type (Airbrushed, Electrospun or Steel Wire) as predicted probabilities for the 3 classes. Our model scored a 99.44% Accuracy, demonstrating potential for adaptation to investigating and solving complex machine learning problems aimed at abstract spatial contexts, or in screening complex, biological, fibrous structures seen in cortical bone and fibrous shells.