Patrick Schnider

Marius Huber, Sara Kalisnik, Patrick Schnider

We present AuToMATo, a novel clustering algorithm based on persistent homology. While AuToMATo is not parameter-free per se, we provide default choices for its parameters that make it into an out-of-the-box clustering algorithm that performs well across the board. AuToMATo combines the existing ToMATo clustering algorithm with a bootstrapping procedure in order to separate significant peaks of an estimated density function from non-significant ones. We perform a thorough comparison of AuToMATo (with its parameters fixed to their defaults) against many other state-of-the-art clustering algorithms. We find not only that AuToMATo compares favorably against parameter-free clustering algorithms, but in many instances also significantly outperforms even the best selection of parameters for other algorithms. AuToMATo is motivated by applications in topological data analysis, in particular the Mapper algorithm, where it is desirable to work with a clustering algorithm that does not need tuning of its parameters. Indeed, we provide evidence that AuToMATo performs well when used with Mapper. Finally, we provide an open-source implementation of AuToMATo in Python that is fully compatible with the standard scikit-learn architecture.

Daniel Bertschinger, Henry Förster, Fabian Klute et al.

We study the common intersection of arrangements of double-wedges. We consider arrangements where double-wedges may be either bowties (which do not contain a vertical line) or hourglasses (which contain a vertical line), in contrast to earlier studies that focused on arrangements of only bowties. This generalization changes the setting drastically, in particular, with respect to all arguments involving the point-line duality. Namely, a point in the intersection of all double-wedges is equivalent to a line that stabs a set of segments $\mathcal{S}$ (corresponding to the bowties) while it avoids a different set of segments $\mathcal{A}$ (corresponding to the complement of the hourglasses). We show that in this general setting, the intersection of $n$ double-wedges may consist of $Ω(n^2)$ interior-disjoint regions. Further, we discuss Gallai-type results for arrangements of segments and anti-segments, and we provide algorithms for computing the intersection of such arrangements with worst-case optimal running time. Finally, we also prove that we can find a single intersection point in almost optimal running time, assuming that 3SUM admits no truly subquadratic-time algorithm.

Juan Amboage, Ernst Röell, Patrick Schnider et al.

Graph neural networks (GNNs) largely rely on the message-passing paradigm, where nodes iteratively aggregate information from their neighbors. Yet, standard message passing neural networks (MPNNs) face well-documented theoretical and practical limitations. Graph positional encoding (PE) has emerged as a promising direction to address these limitations. The Euler Characteristic Transform (ECT) is an efficiently computable geometric-topological invariant that characterizes shapes and graphs. In this work, we combine the differentiable approximation of the ECT (DECT) and its local variant ($\ell$-ECT) to propose LEAP, a new end-to-end trainable local structural PE for graphs. We evaluate our approach on multiple real-world datasets as well as on a synthetic task designed to test its ability to extract topological features. Our results underline the potential of LEAP-based encodings as a powerful component for graph representation learning pipelines.