Thanh-Nghi Do

Thanh-Nghi Do

With rising powerful, low-cost embedded devices, the edge computing has become an increasingly popular choice. In this paper, we propose a new incremental local stochastic gradient descent (SGD) tailored on the Raspberry Pi to deal with large ImageNet ILSVRC 2010 dataset having 1,261,405 images with 1,000 classes. The local SGD splits the data block into $k$ partitions using $k$means algorithm and then it learns in the parallel way SGD models in each data partition to classify the data locally. The incremental local SGD sequentially loads small data blocks of the training dataset to learn local SGD models. The numerical test results on Imagenet dataset show that our incremental local SGD algorithm with the Raspberry Pi 4 is faster and more accurate than the state-of-the-art linear SVM run on a PC Intel(R) Core i7-4790 CPU, 3.6 GHz, 4 cores.

Bich-Chung Phan, Thanh Ma, Huu-Hoa Nguyen et al.

Gene expression classification is a pivotal yet challenging task in bioinformatics, primarily due to the high dimensionality of genomic data and the risk of overfitting. To bridge this gap, we propose BOLIMES, a novel feature selection algorithm designed to enhance gene expression classification by systematically refining the feature subset. Unlike conventional methods that rely solely on statistical ranking or classifier-specific selection, we integrate the robustness of Boruta with the interpretability of LIME, ensuring that only the most relevant and influential genes are retained. BOLIMES first employs Boruta to filter out non-informative genes by comparing each feature against its randomized counterpart, thus preserving valuable information. It then uses LIME to rank the remaining genes based on their local importance to the classifier. Finally, an iterative classification evaluation determines the optimal feature subset by selecting the number of genes that maximizes predictive accuracy. By combining exhaustive feature selection with interpretability-driven refinement, our solution effectively balances dimensionality reduction with high classification performance, offering a powerful solution for high-dimensional gene expression analysis.

Bich-Chung Phan, Thanh Ma, Huu-Hoa Nguyen et al.

Feature selection is a crucial step in analyzing gene expression data, enhancing classification performance, and reducing computational costs for high-dimensional datasets. This paper proposes BoMGene, a hybrid feature selection method that effectively integrates two popular techniques: Boruta and Minimum Redundancy Maximum Relevance (mRMR). The method aims to optimize the feature space and enhance classification accuracy. Experiments were conducted on 25 publicly available gene expression datasets, employing widely used classifiers such as Support Vector Machine (SVM), Random Forest, XGBoost (XGB), and Gradient Boosting Machine (GBM). The results show that using the Boruta-mRMR combination cuts down the number of features chosen compared to just using mRMR, which helps to speed up training time while keeping or even improving classification accuracy compared to using individual feature selection methods. The proposed approach demonstrates clear advantages in accuracy, stability, and practical applicability for multi-class gene expression data analysis