Yuji Matsumoto

CL
Semantic Scholar Profile
h-index23
32papers
9,520citations
Novelty47%
AI Score61

32 Papers

50.5CLMay 27Code
PrionNER: A Named Entity Recognition Dataset for Prion Disease Biomedical Literature

An Dao, Nhan Ly, Thao Tran et al.

Prion diseases are rare, rapidly progressive, and fatal neurodegenerative disorders that remain difficult to diagnose, particularly in their early stages because of nonspecific clinical presentations. However, to our knowledge, there is no publicly available prion-disease-focused dataset designed to capture a broad range of clinically relevant entities from the biomedical literature. We introduce PrionNER, a manually annotated named entity recognition dataset for prion disease clinical information in PubMed abstracts. The current release comprises 317 abstracts, 2,943 sentences, and 6,955 text-bound entity annotations spanning 15 coarse-grained and 31 fine-grained clinically oriented entity types covering diseases, symptoms, diagnostics, findings, anatomy, treatments, and temporal and statistical evidence. Inter-annotator agreement reaches 81.78 exact-match F1, indicating strong annotation consistency. We benchmark supervised BERT baselines, W2NER, and zero-shot extractors on PrionNER. W2NER is the strongest supervised model, and Gemma-4-31B is the strongest zero-shot model, but the benchmark remains challenging, especially for structurally complex mentions and fine-grained clinically adjacent label distinctions. PrionNER provides a clinically grounded benchmark for prion-disease information extraction and supports research on rare-disease biomedical NLP under low-resource, fine-grained, and non-flat extraction conditions. The dataset, annotation guidelines, and evaluation scripts are available at https://github.com/daotuanan/PrionNER/.

CLSep 17, 2022
Unsupervised Lexical Substitution with Decontextualised Embeddings

Takashi Wada, Timothy Baldwin, Yuji Matsumoto et al.

We propose a new unsupervised method for lexical substitution using pre-trained language models. Compared to previous approaches that use the generative capability of language models to predict substitutes, our method retrieves substitutes based on the similarity of contextualised and decontextualised word embeddings, i.e. the average contextual representation of a word in multiple contexts. We conduct experiments in English and Italian, and show that our method substantially outperforms strong baselines and establishes a new state-of-the-art without any explicit supervision or fine-tuning. We further show that our method performs particularly well at predicting low-frequency substitutes, and also generates a diverse list of substitute candidates, reducing morphophonetic or morphosyntactic biases induced by article-noun agreement.

CLJan 23Code
Better Generalizing to Unseen Concepts: An Evaluation Framework and An LLM-Based Auto-Labeled Pipeline for Biomedical Concept Recognition

Shanshan Liu, Noriki Nishida, Fei Cheng et al.

Generalization to unseen concepts is a central challenge due to the scarcity of human annotations in Mention-agnostic Biomedical Concept Recognition (MA-BCR). This work makes two key contributions to systematically address this issue. First, we propose an evaluation framework built on hierarchical concept indices and novel metrics to measure generalization. Second, we explore LLM-based Auto-Labeled Data (ALD) as a scalable resource, creating a task-specific pipeline for its generation. Our research unequivocally shows that while LLM-generated ALD cannot fully substitute for manual annotations, it is a valuable resource for improving generalization, successfully providing models with the broader coverage and structural knowledge needed to approach recognizing unseen concepts. Code and datasets are available at https://github.com/bio-ie-tool/hi-ald.

CVDec 6, 2022
Switching to Discriminative Image Captioning by Relieving a Bottleneck of Reinforcement Learning

Ukyo Honda, Taro Watanabe, Yuji Matsumoto

Discriminativeness is a desirable feature of image captions: captions should describe the characteristic details of input images. However, recent high-performing captioning models, which are trained with reinforcement learning (RL), tend to generate overly generic captions despite their high performance in various other criteria. First, we investigate the cause of the unexpectedly low discriminativeness and show that RL has a deeply rooted side effect of limiting the output words to high-frequency words. The limited vocabulary is a severe bottleneck for discriminativeness as it is difficult for a model to describe the details beyond its vocabulary. Then, based on this identification of the bottleneck, we drastically recast discriminative image captioning as a much simpler task of encouraging low-frequency word generation. Hinted by long-tail classification and debiasing methods, we propose methods that easily switch off-the-shelf RL models to discriminativeness-aware models with only a single-epoch fine-tuning on the part of the parameters. Extensive experiments demonstrate that our methods significantly enhance the discriminativeness of off-the-shelf RL models and even outperform previous discriminativeness-aware methods with much smaller computational costs. Detailed analysis and human evaluation also verify that our methods boost the discriminativeness without sacrificing the overall quality of captions.

CLJun 2, 2023
Unsupervised Paraphrasing of Multiword Expressions

Takashi Wada, Yuji Matsumoto, Timothy Baldwin et al.

We propose an unsupervised approach to paraphrasing multiword expressions (MWEs) in context. Our model employs only monolingual corpus data and pre-trained language models (without fine-tuning), and does not make use of any external resources such as dictionaries. We evaluate our method on the SemEval 2022 idiomatic semantic text similarity task, and show that it outperforms all unsupervised systems and rivals supervised systems.

CLSep 20, 2022
Exploring Optimal Granularity for Extractive Summarization of Unstructured Health Records: Analysis of the Largest Multi-Institutional Archive of Health Records in Japan

Kenichiro Ando, Takashi Okumura, Mamoru Komachi et al.

Automated summarization of clinical texts can reduce the burden of medical professionals. "Discharge summaries" are one promising application of the summarization, because they can be generated from daily inpatient records. Our preliminary experiment suggests that 20-31% of the descriptions in discharge summaries overlap with the content of the inpatient records. However, it remains unclear how the summaries should be generated from the unstructured source. To decompose the physician's summarization process, this study aimed to identify the optimal granularity in summarization. We first defined three types of summarization units with different granularities to compare the performance of the discharge summary generation: whole sentences, clinical segments, and clauses. We defined clinical segments in this study, aiming to express the smallest medically meaningful concepts. To obtain the clinical segments, it was necessary to automatically split the texts in the first stage of the pipeline. Accordingly, we compared rule-based methods and a machine learning method, and the latter outperformed the formers with an F1 score of 0.846 in the splitting task. Next, we experimentally measured the accuracy of extractive summarization using the three types of units, based on the ROUGE-1 metric, on a multi-institutional national archive of health records in Japan. The measured accuracies of extractive summarization using whole sentences, clinical segments, and clauses were 31.91, 36.15, and 25.18, respectively. We found that the clinical segments yielded higher accuracy than sentences and clauses. This result indicates that summarization of inpatient records demands finer granularity than sentence-oriented processing. Although we used only Japanese health records, it can be interpreted as follows: physicians extract "concepts of medical significance" from patient records and recombine them ...

CLMar 10, 2023
Is In-hospital Meta-information Useful for Abstractive Discharge Summary Generation?

Kenichiro Ando, Mamoru Komachi, Takashi Okumura et al.

During the patient's hospitalization, the physician must record daily observations of the patient and summarize them into a brief document called "discharge summary" when the patient is discharged. Automated generation of discharge summary can greatly relieve the physicians' burden, and has been addressed recently in the research community. Most previous studies of discharge summary generation using the sequence-to-sequence architecture focus on only inpatient notes for input. However, electric health records (EHR) also have rich structured metadata (e.g., hospital, physician, disease, length of stay, etc.) that might be useful. This paper investigates the effectiveness of medical meta-information for summarization tasks. We obtain four types of meta-information from the EHR systems and encode each meta-information into a sequence-to-sequence model. Using Japanese EHRs, meta-information encoded models increased ROUGE-1 by up to 4.45 points and BERTScore by 3.77 points over the vanilla Longformer. Also, we found that the encoded meta-information improves the precisions of its related terms in the outputs. Our results showed the benefit of the use of medical meta-information.

15.4CLMar 30
Top-down string-to-dependency Neural Machine Translation

Shuhei Kondo, Katsuhito Sudoh, Yuji Matsumoto

Most of modern neural machine translation (NMT) models are based on an encoder-decoder framework with an attention mechanism. While they perform well on standard datasets, they can have trouble in translation of long inputs that are rare or unseen during training. Incorporating target syntax is one approach to dealing with such length-related problems. We propose a novel syntactic decoder that generates a target-language dependency tree in a top-down, left-to-right order. Experiments show that the proposed top-down string-to-tree decoding generalizes better than conventional sequence-to-sequence decoding in translating long inputs that are not observed in the training data.

IRFeb 10
The Wisdom of Many Queries: Complexity-Diversity Principle for Dense Retriever Training

Xincan Feng, Noriki Nishida, Yusuke Sakai et al.

Prior work reports conflicting results on query diversity in synthetic data generation for dense retrieval. We identify this conflict and design Q-D metrics to quantify diversity's impact, making the problem measurable. Through experiments on 4 benchmark types (31 datasets), we find query diversity especially benefits multi-hop retrieval. Deep analysis on multi-hop data reveals that diversity benefit correlates strongly with query complexity ($r$$\geq$0.95, $p$$<$0.05 in 12/14 conditions), measured by content words (CW). We formalize this as the Complexity-Diversity Principle (CDP): query complexity determines optimal diversity. CDP provides actionable thresholds (CW$>$10: use diversity; CW$<$7: avoid it). Guided by CDP, we propose zero-shot multi-query synthesis for multi-hop tasks, achieving state-of-the-art performance.

DLSep 29, 2025Code
Overview of SCIDOCA 2025 Shared Task on Citation Prediction, Discovery, and Placement

An Dao, Vu Tran, Le-Minh Nguyen et al.

We present an overview of the SCIDOCA 2025 Shared Task, which focuses on citation discovery and prediction in scientific documents. The task is divided into three subtasks: (1) Citation Discovery, where systems must identify relevant references for a given paragraph; (2) Masked Citation Prediction, which requires selecting the correct citation for masked citation slots; and (3) Citation Sentence Prediction, where systems must determine the correct reference for each cited sentence. We release a large-scale dataset constructed from the Semantic Scholar Open Research Corpus (S2ORC), containing over 60,000 annotated paragraphs and a curated reference set. The test set consists of 1,000 paragraphs from distinct papers, each annotated with ground-truth citations and distractor candidates. A total of seven teams registered, with three submitting results. We report performance metrics across all subtasks and analyze the effectiveness of submitted systems. This shared task provides a new benchmark for evaluating citation modeling and encourages future research in scientific document understanding. The dataset and task materials are publicly available at https://github.com/daotuanan/scidoca2025-shared-task.

CLMay 19, 2025Code
MA-COIR: Leveraging Semantic Search Index and Generative Models for Ontology-Driven Biomedical Concept Recognition

Shanshan Liu, Noriki Nishida, Rumana Ferdous Munne et al.

Recognizing biomedical concepts in the text is vital for ontology refinement, knowledge graph construction, and concept relationship discovery. However, traditional concept recognition methods, relying on explicit mention identification, often fail to capture complex concepts not explicitly stated in the text. To overcome this limitation, we introduce MA-COIR, a framework that reformulates concept recognition as an indexing-recognition task. By assigning semantic search indexes (ssIDs) to concepts, MA-COIR resolves ambiguities in ontology entries and enhances recognition efficiency. Using a pretrained BART-based model fine-tuned on small datasets, our approach reduces computational requirements to facilitate adoption by domain experts. Furthermore, we incorporate large language models (LLMs)-generated queries and synthetic data to improve recognition in low-resource settings. Experimental results on three scenarios (CDR, HPO, and HOIP) highlight the effectiveness of MA-COIR in recognizing both explicit and implicit concepts without the need for mention-level annotations during inference, advancing ontology-driven concept recognition in biomedical domain applications. Our code and constructed data are available at https://github.com/sl-633/macoir-master.

CLOct 2, 2020Code
LUKE: Deep Contextualized Entity Representations with Entity-aware Self-attention

Ikuya Yamada, Akari Asai, Hiroyuki Shindo et al.

Entity representations are useful in natural language tasks involving entities. In this paper, we propose new pretrained contextualized representations of words and entities based on the bidirectional transformer. The proposed model treats words and entities in a given text as independent tokens, and outputs contextualized representations of them. Our model is trained using a new pretraining task based on the masked language model of BERT. The task involves predicting randomly masked words and entities in a large entity-annotated corpus retrieved from Wikipedia. We also propose an entity-aware self-attention mechanism that is an extension of the self-attention mechanism of the transformer, and considers the types of tokens (words or entities) when computing attention scores. The proposed model achieves impressive empirical performance on a wide range of entity-related tasks. In particular, it obtains state-of-the-art results on five well-known datasets: Open Entity (entity typing), TACRED (relation classification), CoNLL-2003 (named entity recognition), ReCoRD (cloze-style question answering), and SQuAD 1.1 (extractive question answering). Our source code and pretrained representations are available at https://github.com/studio-ousia/luke.

CLSep 1, 2019Code
Global Entity Disambiguation with BERT

Ikuya Yamada, Koki Washio, Hiroyuki Shindo et al.

We propose a global entity disambiguation (ED) model based on BERT. To capture global contextual information for ED, our model treats not only words but also entities as input tokens, and solves the task by sequentially resolving mentions to their referent entities and using resolved entities as inputs at each step. We train the model using a large entity-annotated corpus obtained from Wikipedia. We achieve new state-of-the-art results on five standard ED datasets: AIDA-CoNLL, MSNBC, AQUAINT, ACE2004, and WNED-WIKI. The source code and model checkpoint are available at https://github.com/studio-ousia/luke.

CLDec 15, 2018Code
Wikipedia2Vec: An Efficient Toolkit for Learning and Visualizing the Embeddings of Words and Entities from Wikipedia

Ikuya Yamada, Akari Asai, Jin Sakuma et al.

The embeddings of entities in a large knowledge base (e.g., Wikipedia) are highly beneficial for solving various natural language tasks that involve real world knowledge. In this paper, we present Wikipedia2Vec, a Python-based open-source tool for learning the embeddings of words and entities from Wikipedia. The proposed tool enables users to learn the embeddings efficiently by issuing a single command with a Wikipedia dump file as an argument. We also introduce a web-based demonstration of our tool that allows users to visualize and explore the learned embeddings. In our experiments, our tool achieved a state-of-the-art result on the KORE entity relatedness dataset, and competitive results on various standard benchmark datasets. Furthermore, our tool has been used as a key component in various recent studies. We publicize the source code, demonstration, and the pretrained embeddings for 12 languages at https://wikipedia2vec.github.io.

CLJun 18, 2017Code
Knowledge Transfer for Out-of-Knowledge-Base Entities: A Graph Neural Network Approach

Takuo Hamaguchi, Hidekazu Oiwa, Masashi Shimbo et al.

Knowledge base completion (KBC) aims to predict missing information in a knowledge base.In this paper, we address the out-of-knowledge-base (OOKB) entity problem in KBC:how to answer queries concerning test entities not observed at training time. Existing embedding-based KBC models assume that all test entities are available at training time, making it unclear how to obtain embeddings for new entities without costly retraining. To solve the OOKB entity problem without retraining, we use graph neural networks (Graph-NNs) to compute the embeddings of OOKB entities, exploiting the limited auxiliary knowledge provided at test time.The experimental results show the effectiveness of our proposed model in the OOKB setting.Additionally, in the standard KBC setting in which OOKB entities are not involved, our model achieves state-of-the-art performance on the WordNet dataset. The code and dataset are available at https://github.com/takuo-h/GNN-for-OOKB

CLMar 27, 2024
A Dataset for Pharmacovigilance in German, French, and Japanese: Annotating Adverse Drug Reactions across Languages

Lisa Raithel, Hui-Syuan Yeh, Shuntaro Yada et al.

User-generated data sources have gained significance in uncovering Adverse Drug Reactions (ADRs), with an increasing number of discussions occurring in the digital world. However, the existing clinical corpora predominantly revolve around scientific articles in English. This work presents a multilingual corpus of texts concerning ADRs gathered from diverse sources, including patient fora, social media, and clinical reports in German, French, and Japanese. Our corpus contains annotations covering 12 entity types, four attribute types, and 13 relation types. It contributes to the development of real-world multilingual language models for healthcare. We provide statistics to highlight certain challenges associated with the corpus and conduct preliminary experiments resulting in strong baselines for extracting entities and relations between these entities, both within and across languages.

CLJun 13, 2025
Post Persona Alignment for Multi-Session Dialogue Generation

Yi-Pei Chen, Noriki Nishida, Hideki Nakayama et al.

Multi-session persona-based dialogue generation presents challenges in maintaining long-term consistency and generating diverse, personalized responses. While large language models (LLMs) excel in single-session dialogues, they struggle to preserve persona fidelity and conversational coherence across extended interactions. Existing methods typically retrieve persona information before response generation, which can constrain diversity and result in generic outputs. We propose Post Persona Alignment (PPA), a novel two-stage framework that reverses this process. PPA first generates a general response based solely on dialogue context, then retrieves relevant persona memories using the response as a query, and finally refines the response to align with the speaker's persona. This post-hoc alignment strategy promotes naturalness and diversity while preserving consistency and personalization. Experiments on multi-session LLM-generated dialogue data demonstrate that PPA significantly outperforms prior approaches in consistency, diversity, and persona relevance, offering a more flexible and effective paradigm for long-term personalized dialogue generation.

CLApr 28, 2021
Removing Word-Level Spurious Alignment between Images and Pseudo-Captions in Unsupervised Image Captioning

Ukyo Honda, Yoshitaka Ushiku, Atsushi Hashimoto et al.

Unsupervised image captioning is a challenging task that aims at generating captions without the supervision of image-sentence pairs, but only with images and sentences drawn from different sources and object labels detected from the images. In previous work, pseudo-captions, i.e., sentences that contain the detected object labels, were assigned to a given image. The focus of the previous work was on the alignment of input images and pseudo-captions at the sentence level. However, pseudo-captions contain many words that are irrelevant to a given image. In this work, we investigate the effect of removing mismatched words from image-sentence alignment to determine how they make this task difficult. We propose a simple gating mechanism that is trained to align image features with only the most reliable words in pseudo-captions: the detected object labels. The experimental results show that our proposed method outperforms the previous methods without introducing complex sentence-level learning objectives. Combined with the sentence-level alignment method of previous work, our method further improves its performance. These results confirm the importance of careful alignment in word-level details.

CLOct 27, 2020
Learning Contextualised Cross-lingual Word Embeddings and Alignments for Extremely Low-Resource Languages Using Parallel Corpora

Takashi Wada, Tomoharu Iwata, Yuji Matsumoto et al.

We propose a new approach for learning contextualised cross-lingual word embeddings based on a small parallel corpus (e.g. a few hundred sentence pairs). Our method obtains word embeddings via an LSTM encoder-decoder model that simultaneously translates and reconstructs an input sentence. Through sharing model parameters among different languages, our model jointly trains the word embeddings in a common cross-lingual space. We also propose to combine word and subword embeddings to make use of orthographic similarities across different languages. We base our experiments on real-world data from endangered languages, namely Yongning Na, Shipibo-Konibo, and Griko. Our experiments on bilingual lexicon induction and word alignment tasks show that our model outperforms existing methods by a large margin for most language pairs. These results demonstrate that, contrary to common belief, an encoder-decoder translation model is beneficial for learning cross-lingual representations even in extremely low-resource conditions. Furthermore, our model also works well on high-resource conditions, achieving state-of-the-art performance on a German-English word-alignment task.

CLJan 21, 2020
Length-controllable Abstractive Summarization by Guiding with Summary Prototype

Itsumi Saito, Kyosuke Nishida, Kosuke Nishida et al.

We propose a new length-controllable abstractive summarization model. Recent state-of-the-art abstractive summarization models based on encoder-decoder models generate only one summary per source text. However, controllable summarization, especially of the length, is an important aspect for practical applications. Previous studies on length-controllable abstractive summarization incorporate length embeddings in the decoder module for controlling the summary length. Although the length embeddings can control where to stop decoding, they do not decide which information should be included in the summary within the length constraint. Unlike the previous models, our length-controllable abstractive summarization model incorporates a word-level extractive module in the encoder-decoder model instead of length embeddings. Our model generates a summary in two steps. First, our word-level extractor extracts a sequence of important words (we call it the "prototype text") from the source text according to the word-level importance scores and the length constraint. Second, the prototype text is used as additional input to the encoder-decoder model, which generates a summary by jointly encoding and copying words from both the prototype text and source text. Since the prototype text is a guide to both the content and length of the summary, our model can generate an informative and length-controlled summary. Experiments with the CNN/Daily Mail dataset and the NEWSROOM dataset show that our model outperformed previous models in length-controlled settings.

LGAug 31, 2019
Gated Graph Recursive Neural Networks for Molecular Property Prediction

Hiroyuki Shindo, Yuji Matsumoto

Molecule property prediction is a fundamental problem for computer-aided drug discovery and materials science. Quantum-chemical simulations such as density functional theory (DFT) have been widely used for calculating the molecule properties, however, because of the heavy computational cost, it is difficult to search a huge number of potential chemical compounds. Machine learning methods for molecular modeling are attractive alternatives, however, the development of expressive, accurate, and scalable graph neural networks for learning molecular representations is still challenging. In this work, we propose a simple and powerful graph neural networks for molecular property prediction. We model a molecular as a directed complete graph in which each atom has a spatial position, and introduce a recursive neural network with simple gating function. We also feed input embeddings for every layers as skip connections to accelerate the training. Experimental results show that our model achieves the state-of-the-art performance on the standard benchmark dataset for molecular property prediction.

CLAug 15, 2019
Improving Multi-Word Entity Recognition for Biomedical Texts

Hamada A. Nayel, H. L. Shashirekha, Hiroyuki Shindo et al.

Biomedical Named Entity Recognition (BioNER) is a crucial step for analyzing Biomedical texts, which aims at extracting biomedical named entities from a given text. Different supervised machine learning algorithms have been applied for BioNER by various researchers. The main requirement of these approaches is an annotated dataset used for learning the parameters of machine learning algorithms. Segment Representation (SR) models comprise of different tag sets used for representing the annotated data, such as IOB2, IOE2 and IOBES. In this paper, we propose an extension of IOBES model to improve the performance of BioNER. The proposed SR model, FROBES, improves the representation of multi-word entities. We used Bidirectional Long Short-Term Memory (BiLSTM) network; an instance of Recurrent Neural Networks (RNN), to design a baseline system for BioNER and evaluated the new SR model on two datasets, i2b2/VA 2010 challenge dataset and JNLPBA 2004 shared task dataset. The proposed SR model outperforms other models for multi-word entities with length greater than two. Further, the outputs of different SR models have been combined using majority voting ensemble method which outperforms the baseline models performance.

LGNov 10, 2018
Playing by the Book: An Interactive Game Approach for Action Graph Extraction from Text

Ronen Tamari, Hiroyuki Shindo, Dafna Shahaf et al.

Understanding procedural text requires tracking entities, actions and effects as the narrative unfolds. We focus on the challenging real-world problem of action-graph extraction from material science papers, where language is highly specialized and data annotation is expensive and scarce. We propose a novel approach, Text2Quest, where procedural text is interpreted as instructions for an interactive game. A learning agent completes the game by executing the procedure correctly in a text-based simulated lab environment. The framework can complement existing approaches and enables richer forms of learning compared to static texts. We discuss potential limitations and advantages of the approach, and release a prototype proof-of-concept, hoping to encourage research in this direction.

CLOct 18, 2018
Reduction of Parameter Redundancy in Biaffine Classifiers with Symmetric and Circulant Weight Matrices

Tomoki Matsuno, Katsuhiko Hayashi, Takahiro Ishihara et al.

Currently, the biaffine classifier has been attracting attention as a method to introduce an attention mechanism into the modeling of binary relations. For instance, in the field of dependency parsing, the Deep Biaffine Parser by Dozat and Manning has achieved state-of-the-art performance as a graph-based dependency parser on the English Penn Treebank and CoNLL 2017 shared task. On the other hand, it is reported that parameter redundancy in the weight matrix in biaffine classifiers, which has O(n^2) parameters, results in overfitting (n is the number of dimensions). In this paper, we attempted to reduce the parameter redundancy by assuming either symmetry or circularity of weight matrices. In our experiments on the CoNLL 2017 shared task dataset, our model achieved better or comparable accuracy on most of the treebanks with more than 16% parameter reduction.

CLOct 4, 2018
A Span Selection Model for Semantic Role Labeling

Hiroki Ouchi, Hiroyuki Shindo, Yuji Matsumoto

We present a simple and accurate span-based model for semantic role labeling (SRL). Our model directly takes into account all possible argument spans and scores them for each label. At decoding time, we greedily select higher scoring labeled spans. One advantage of our model is to allow us to design and use span-level features, that are difficult to use in token-based BIO tagging approaches. Experimental results demonstrate that our ensemble model achieves the state-of-the-art results, 87.4 F1 and 87.0 F1 on the CoNLL-2005 and 2012 datasets, respectively.

LGJun 11, 2018
A Fast and Easy Regression Technique for k-NN Classification Without Using Negative Pairs

Yutaro Shigeto, Masashi Shimbo, Yuji Matsumoto

This paper proposes an inexpensive way to learn an effective dissimilarity function to be used for $k$-nearest neighbor ($k$-NN) classification. Unlike Mahalanobis metric learning methods that map both query (unlabeled) objects and labeled objects to new coordinates by a single transformation, our method learns a transformation of labeled objects to new points in the feature space whereas query objects are kept in their original coordinates. This method has several advantages over existing distance metric learning methods: (i) In experiments with large document and image datasets, it achieves $k$-NN classification accuracy better than or at least comparable to the state-of-the-art metric learning methods. (ii) The transformation can be learned efficiently by solving a standard ridge regression problem. For document and image datasets, training is often more than two orders of magnitude faster than the fastest metric learning methods tested. This speed-up is also due to the fact that the proposed method eliminates the optimization over "negative" object pairs, i.e., objects whose class labels are different. (iii) The formulation has a theoretical justification in terms of reducing hubness in data.

LGMay 8, 2018
Interpretable Adversarial Perturbation in Input Embedding Space for Text

Motoki Sato, Jun Suzuki, Hiroyuki Shindo et al.

Following great success in the image processing field, the idea of adversarial training has been applied to tasks in the natural language processing (NLP) field. One promising approach directly applies adversarial training developed in the image processing field to the input word embedding space instead of the discrete input space of texts. However, this approach abandons such interpretability as generating adversarial texts to significantly improve the performance of NLP tasks. This paper restores interpretability to such methods by restricting the directions of perturbations toward the existing words in the input embedding space. As a result, we can straightforwardly reconstruct each input with perturbations to an actual text by considering the perturbations to be the replacement of words in the sentence while maintaining or even improving the task performance.

CLApr 23, 2017
A* CCG Parsing with a Supertag and Dependency Factored Model

Masashi Yoshikawa, Hiroshi Noji, Yuji Matsumoto

We propose a new A* CCG parsing model in which the probability of a tree is decomposed into factors of CCG categories and its syntactic dependencies both defined on bi-directional LSTMs. Our factored model allows the precomputation of all probabilities and runs very efficiently, while modeling sentence structures explicitly via dependencies. Our model achieves the state-of-the-art results on English and Japanese CCG parsing.

LGFeb 22, 2017
An Algebraic Formalization of Forward and Forward-backward Algorithms

Ai Azuma, Masashi Shimbo, Yuji Matsumoto

In this paper, we propose an algebraic formalization of the two important classes of dynamic programming algorithms called forward and forward-backward algorithms. They are generalized extensively in this study so that a wide range of other existing algorithms is subsumed. Forward algorithms generalized in this study subsume the ordinary forward algorithm on trellises for sequence labeling, the inside algorithm on derivation forests for CYK parsing, a unidirectional message passing on acyclic factor graphs, the forward mode of automatic differentiation on computation graphs with addition and multiplication, and so on. In addition, we reveal algebraic structures underlying complicated computation with forward algorithms. By the aid of the revealed algebraic structures, we also propose a systematic framework to design complicated variants of forward algorithms. Forward-backward algorithms generalized in this study subsume the ordinary forward-backward algorithm on trellises for sequence labeling, the inside-outside algorithm on derivation forests for CYK parsing, the sum-product algorithm on acyclic factor graphs, the reverse mode of automatic differentiation (a.k.a. back propagation) on computation graphs with addition and multiplication, and so on. We also propose an algebraic characterization of what can be computed by forward-backward algorithms and elucidate the relationship between forward and forward-backward algorithms.

CLApr 22, 2016
Dependency Parsing with LSTMs: An Empirical Evaluation

Adhiguna Kuncoro, Yuichiro Sawai, Kevin Duh et al.

We propose a transition-based dependency parser using Recurrent Neural Networks with Long Short-Term Memory (LSTM) units. This extends the feedforward neural network parser of Chen and Manning (2014) and enables modelling of entire sequences of shift/reduce transition decisions. On the Google Web Treebank, our LSTM parser is competitive with the best feedforward parser on overall accuracy and notably achieves more than 3% improvement for long-range dependencies, which has proved difficult for previous transition-based parsers due to error propagation and limited context information. Our findings additionally suggest that dropout regularisation on the embedding layer is crucial to improve the LSTM's generalisation.

LGJul 3, 2015
Ridge Regression, Hubness, and Zero-Shot Learning

Yutaro Shigeto, Ikumi Suzuki, Kazuo Hara et al.

This paper discusses the effect of hubness in zero-shot learning, when ridge regression is used to find a mapping between the example space to the label space. Contrary to the existing approach, which attempts to find a mapping from the example space to the label space, we show that mapping labels into the example space is desirable to suppress the emergence of hubs in the subsequent nearest neighbor search step. Assuming a simple data model, we prove that the proposed approach indeed reduces hubness. This was verified empirically on the tasks of bilingual lexicon extraction and image labeling: hubness was reduced with both of these tasks and the accuracy was improved accordingly.

CLMar 6, 2013
Japanese-Spanish Thesaurus Construction Using English as a Pivot

Jessica Ramírez, Masayuki Asahara, Yuji Matsumoto

We present the results of research with the goal of automatically creating a multilingual thesaurus based on the freely available resources of Wikipedia and WordNet. Our goal is to increase resources for natural language processing tasks such as machine translation targeting the Japanese-Spanish language pair. Given the scarcity of resources, we use existing English resources as a pivot for creating a trilingual Japanese-Spanish-English thesaurus. Our approach consists of extracting the translation tuples from Wikipedia, disambiguating them by mapping them to WordNet word senses. We present results comparing two methods of disambiguation, the first using VSM on Wikipedia article texts and WordNet definitions, and the second using categorical information extracted from Wikipedia, We find that mixing the two methods produces favorable results. Using the proposed method, we have constructed a multilingual Spanish-Japanese-English thesaurus consisting of 25,375 entries. The same method can be applied to any pair of languages that are linked to English in Wikipedia.