CLJun 28, 2023Code
Large Language Model as Attributed Training Data Generator: A Tale of Diversity and BiasYue Yu, Yuchen Zhuang, Jieyu Zhang et al. · deepmind, uw
Large language models (LLMs) have been recently leveraged as training data generators for various natural language processing (NLP) tasks. While previous research has explored different approaches to training models using generated data, they generally rely on simple class-conditional prompts, which may limit the diversity of the generated data and inherit systematic biases of LLM. Thus, we investigate training data generation with diversely attributed prompts (e.g., specifying attributes like length and style), which have the potential to yield diverse and attributed generated data. Our investigation focuses on datasets with high cardinality and diverse domains, wherein we demonstrate that attributed prompts outperform simple class-conditional prompts in terms of the resulting model's performance. Additionally, we present a comprehensive empirical study on data generation encompassing vital aspects like bias, diversity, and efficiency, and highlight three key observations: firstly, synthetic datasets generated by simple prompts exhibit significant biases, such as regional bias; secondly, attribute diversity plays a pivotal role in enhancing model performance; lastly, attributed prompts achieve the performance of simple class-conditional prompts while utilizing only 5\% of the querying cost of ChatGPT associated with the latter. The data and code are available on \url{https://github.com/yueyu1030/AttrPrompt}.
NCNov 1, 2022Code
Learning Task-Aware Effective Brain Connectivity for fMRI Analysis with Graph Neural NetworksYue Yu, Xuan Kan, Hejie Cui et al. · cmu
Functional magnetic resonance imaging (fMRI) has become one of the most common imaging modalities for brain function analysis. Recently, graph neural networks (GNN) have been adopted for fMRI analysis with superior performance. Unfortunately, traditional functional brain networks are mainly constructed based on similarities among region of interests (ROI), which are noisy and agnostic to the downstream prediction tasks and can lead to inferior results for GNN-based models. To better adapt GNNs for fMRI analysis, we propose TBDS, an end-to-end framework based on \underline{T}ask-aware \underline{B}rain connectivity \underline{D}AG (short for Directed Acyclic Graph) \underline{S}tructure generation for fMRI analysis. The key component of TBDS is the brain network generator which adopts a DAG learning approach to transform the raw time-series into task-aware brain connectivities. Besides, we design an additional contrastive regularization to inject task-specific knowledge during the brain network generation process. Comprehensive experiments on two fMRI datasets, namely Adolescent Brain Cognitive Development (ABCD) and Philadelphia Neuroimaging Cohort (PNC) datasets demonstrate the efficacy of TBDS. In addition, the generated brain networks also highlight the prediction-related brain regions and thus provide unique interpretations of the prediction results. Our implementation will be published to https://github.com/yueyu1030/TBDS upon acceptance.
CLSep 15, 2022Code
Cold-Start Data Selection for Few-shot Language Model Fine-tuning: A Prompt-Based Uncertainty Propagation ApproachYue Yu, Rongzhi Zhang, Ran Xu et al. · deepmind, uw
Large Language Models have demonstrated remarkable few-shot performance, but the performance can be sensitive to the selection of few-shot instances. We propose PATRON, a new method that uses prompt-based uncertainty estimation for data selection for pre-trained language model fine-tuning under cold-start scenarios, i.e., no initial labeled data are available. In PATRON, we design (1) a prompt-based uncertainty propagation approach to estimate the importance of data points and (2) a partition-then-rewrite (PTR) strategy to promote sample diversity when querying for annotations. Experiments on six text classification datasets show that PATRON outperforms the strongest cold-start data selection baselines by up to 6.9%. Besides, with 128 labels only, PATRON achieves 91.0% and 92.1% of the fully supervised performance based on vanilla fine-tuning and prompt-based learning respectively. Our implementation of PATRON is available at \url{https://github.com/yueyu1030/Patron}.
CLJul 2, 2024Code
RankRAG: Unifying Context Ranking with Retrieval-Augmented Generation in LLMsYue Yu, Wei Ping, Zihan Liu et al.
Large language models (LLMs) typically utilize the top-k contexts from a retriever in retrieval-augmented generation (RAG). In this work, we propose a novel instruction fine-tuning framework RankRAG, which instruction-tunes a single LLM for the dual purpose of context ranking and answer generation in RAG. In particular, the instruction-tuned LLMs work surprisingly well by adding a small fraction of ranking data into the training blend, and outperform existing expert ranking models, including the same LLM exclusively fine-tuned on a large amount of ranking data. For generation, we compare our model with many strong baselines, including GPT-4-0613, GPT-4-turbo-2024-0409, and ChatQA-1.5, an open-sourced model with the state-of-the-art performance on RAG benchmarks. Specifically, our Llama3-RankRAG significantly outperforms Llama3-ChatQA-1.5 and GPT-4 models on nine knowledge-intensive benchmarks. In addition, it also performs comparably to GPT-4 on five RAG benchmarks in the biomedical domain without instruction fine-tuning on biomedical data, demonstrating its superb capability for generalization to new domains.
CLOct 27, 2022Code
COCO-DR: Combating Distribution Shifts in Zero-Shot Dense Retrieval with Contrastive and Distributionally Robust LearningYue Yu, Chenyan Xiong, Si Sun et al. · tsinghua
We present a new zero-shot dense retrieval (ZeroDR) method, COCO-DR, to improve the generalization ability of dense retrieval by combating the distribution shifts between source training tasks and target scenarios. To mitigate the impact of document differences, COCO-DR continues pretraining the language model on the target corpora to adapt the model to target distributions via COtinuous COtrastive learning. To prepare for unseen target queries, COCO-DR leverages implicit Distributionally Robust Optimization (iDRO) to reweight samples from different source query clusters for improving model robustness over rare queries during fine-tuning. COCO-DR achieves superior average performance on BEIR, the zero-shot retrieval benchmark. At BERT Base scale, COCO-DR Base outperforms other ZeroDR models with 60x larger size. At BERT Large scale, COCO-DR Large outperforms the giant GPT-3 embedding model which has 500x more parameters. Our analysis show the correlation between COCO-DR's effectiveness in combating distribution shifts and improving zero-shot accuracy. Our code and model can be found at \url{https://github.com/OpenMatch/COCO-DR}.
CLNov 1, 2023Code
Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation with Large Language ModelsRan Xu, Hejie Cui, Yue Yu et al. · gatech
Clinical natural language processing requires methods that can address domain-specific challenges, such as complex medical terminology and clinical contexts. Recently, large language models (LLMs) have shown promise in this domain. Yet, their direct deployment can lead to privacy issues and are constrained by resources. To address this challenge, we delve into synthetic clinical text generation using LLMs for clinical NLP tasks. We propose an innovative, resource-efficient approach, ClinGen, which infuses knowledge into the process. Our model involves clinical knowledge extraction and context-informed LLM prompting. Both clinical topics and writing styles are drawn from external domain-specific knowledge graphs and LLMs to guide data generation. Our extensive empirical study across 7 clinical NLP tasks and 16 datasets reveals that ClinGen consistently enhances performance across various tasks, effectively aligning the distribution of real datasets and significantly enriching the diversity of generated training instances. Our code is available at \url{https://github.com/ritaranx/ClinGen}.
CLOct 31, 2022Code
Reduce Catastrophic Forgetting of Dense Retrieval Training with Teleportation NegativesSi Sun, Chenyan Xiong, Yue Yu et al. · tsinghua
In this paper, we investigate the instability in the standard dense retrieval training, which iterates between model training and hard negative selection using the being-trained model. We show the catastrophic forgetting phenomena behind the training instability, where models learn and forget different negative groups during training iterations. We then propose ANCE-Tele, which accumulates momentum negatives from past iterations and approximates future iterations using lookahead negatives, as "teleportations" along the time axis to smooth the learning process. On web search and OpenQA, ANCE-Tele outperforms previous state-of-the-art systems of similar size, eliminates the dependency on sparse retrieval negatives, and is competitive among systems using significantly more (50x) parameters. Our analysis demonstrates that teleportation negatives reduce catastrophic forgetting and improve convergence speed for dense retrieval training. Our code is available at https://github.com/OpenMatch/ANCE-Tele.
LGOct 16, 2023Code
Robust Multi-Agent Reinforcement Learning via Adversarial Regularization: Theoretical Foundation and Stable AlgorithmsAlexander Bukharin, Yan Li, Yue Yu et al. · gatech
Multi-Agent Reinforcement Learning (MARL) has shown promising results across several domains. Despite this promise, MARL policies often lack robustness and are therefore sensitive to small changes in their environment. This presents a serious concern for the real world deployment of MARL algorithms, where the testing environment may slightly differ from the training environment. In this work we show that we can gain robustness by controlling a policy's Lipschitz constant, and under mild conditions, establish the existence of a Lipschitz and close-to-optimal policy. Based on these insights, we propose a new robust MARL framework, ERNIE, that promotes the Lipschitz continuity of the policies with respect to the state observations and actions by adversarial regularization. The ERNIE framework provides robustness against noisy observations, changing transition dynamics, and malicious actions of agents. However, ERNIE's adversarial regularization may introduce some training instability. To reduce this instability, we reformulate adversarial regularization as a Stackelberg game. We demonstrate the effectiveness of the proposed framework with extensive experiments in traffic light control and particle environments. In addition, we extend ERNIE to mean-field MARL with a formulation based on distributionally robust optimization that outperforms its non-robust counterpart and is of independent interest. Our code is available at https://github.com/abukharin3/ERNIE.
CLOct 26, 2022
ReSel: N-ary Relation Extraction from Scientific Text and Tables by Learning to Retrieve and SelectYuchen Zhuang, Yinghao Li, Jerry Junyang Cheung et al. · gatech
We study the problem of extracting N-ary relation tuples from scientific articles. This task is challenging because the target knowledge tuples can reside in multiple parts and modalities of the document. Our proposed method ReSel decomposes this task into a two-stage procedure that first retrieves the most relevant paragraph/table and then selects the target entity from the retrieved component. For the high-level retrieval stage, ReSel designs a simple and effective feature set, which captures multi-level lexical and semantic similarities between the query and components. For the low-level selection stage, ReSel designs a cross-modal entity correlation graph along with a multi-view architecture, which models both semantic and document-structural relations between entities. Our experiments on three scientific information extraction datasets show that ReSel outperforms state-of-the-art baselines significantly.
LGJan 10, 2023Code
Neighborhood-Regularized Self-Training for Learning with Few LabelsRan Xu, Yue Yu, Hejie Cui et al.
Training deep neural networks (DNNs) with limited supervision has been a popular research topic as it can significantly alleviate the annotation burden. Self-training has been successfully applied in semi-supervised learning tasks, but one drawback of self-training is that it is vulnerable to the label noise from incorrect pseudo labels. Inspired by the fact that samples with similar labels tend to share similar representations, we develop a neighborhood-based sample selection approach to tackle the issue of noisy pseudo labels. We further stabilize self-training via aggregating the predictions from different rounds during sample selection. Experiments on eight tasks show that our proposed method outperforms the strongest self-training baseline with 1.83% and 2.51% performance gain for text and graph datasets on average. Our further analysis demonstrates that our proposed data selection strategy reduces the noise of pseudo labels by 36.8% and saves 57.3% of the time when compared with the best baseline. Our code and appendices will be uploaded to https://github.com/ritaranx/NeST.
CLSep 28, 2023Code
At Which Training Stage Does Code Data Help LLMs Reasoning?Yingwei Ma, Yue Liu, Yue Yu et al.
Large Language Models (LLMs) have exhibited remarkable reasoning capabilities and become the foundation of language technologies. Inspired by the great success of code data in training LLMs, we naturally wonder at which training stage introducing code data can really help LLMs reasoning. To this end, this paper systematically explores the impact of code data on LLMs at different stages. Concretely, we introduce the code data at the pre-training stage, instruction-tuning stage, and both of them, respectively. Then, the reasoning capability of LLMs is comprehensively and fairly evaluated via six reasoning tasks in five domains. We critically analyze the experimental results and provide conclusions with insights. First, pre-training LLMs with the mixture of code and text can significantly enhance LLMs' general reasoning capability almost without negative transfer on other tasks. Besides, at the instruction-tuning stage, code data endows LLMs the task-specific reasoning capability. Moreover, the dynamic mixing strategy of code and text data assists LLMs to learn reasoning capability step-by-step during training. These insights deepen the understanding of LLMs regarding reasoning ability for their application, such as scientific question answering, legal support, etc. The source code and model parameters are released at the link:~\url{https://github.com/yingweima2022/CodeLLM}.
CLJun 12, 2023Code
Weakly-Supervised Scientific Document Classification via Retrieval-Augmented Multi-Stage TrainingRan Xu, Yue Yu, Joyce C. Ho et al.
Scientific document classification is a critical task for a wide range of applications, but the cost of obtaining massive amounts of human-labeled data can be prohibitive. To address this challenge, we propose a weakly-supervised approach for scientific document classification using label names only. In scientific domains, label names often include domain-specific concepts that may not appear in the document corpus, making it difficult to match labels and documents precisely. To tackle this issue, we propose WANDER, which leverages dense retrieval to perform matching in the embedding space to capture the semantics of label names. We further design the label name expansion module to enrich the label name representations. Lastly, a self-training step is used to refine the predictions. The experiments on three datasets show that WANDER outperforms the best baseline by 11.9% on average. Our code will be published at https://github.com/ritaranx/wander.
CVJun 15, 2022Code
PolyU-BPCoMa: A Dataset and Benchmark Towards Mobile Colorized Mapping Using a Backpack Multisensorial SystemWenzhong Shi, Pengxin Chen, Muyang Wang et al.
Constructing colorized point clouds from mobile laser scanning and images is a fundamental work in surveying and mapping. It is also an essential prerequisite for building digital twins for smart cities. However, existing public datasets are either in relatively small scales or lack accurate geometrical and color ground truth. This paper documents a multisensorial dataset named PolyU-BPCoMA which is distinctively positioned towards mobile colorized mapping. The dataset incorporates resources of 3D LiDAR, spherical imaging, GNSS and IMU on a backpack platform. Color checker boards are pasted in each surveyed area as targets and ground truth data are collected by an advanced terrestrial laser scanner (TLS). 3D geometrical and color information can be recovered in the colorized point clouds produced by the backpack system and the TLS, respectively. Accordingly, we provide an opportunity to benchmark the mapping and colorization accuracy simultaneously for a mobile multisensorial system. The dataset is approximately 800 GB in size covering both indoor and outdoor environments. The dataset and development kits are available at https://github.com/chenpengxin/PolyU-BPCoMa.git.
LGJul 8, 2022
Physics-Informed Deep Neural Operator NetworksSomdatta Goswami, Aniruddha Bora, Yue Yu et al.
Standard neural networks can approximate general nonlinear operators, represented either explicitly by a combination of mathematical operators, e.g., in an advection-diffusion-reaction partial differential equation, or simply as a black box, e.g., a system-of-systems. The first neural operator was the Deep Operator Network (DeepONet), proposed in 2019 based on rigorous approximation theory. Since then, a few other less general operators have been published, e.g., based on graph neural networks or Fourier transforms. For black box systems, training of neural operators is data-driven only but if the governing equations are known they can be incorporated into the loss function during training to develop physics-informed neural operators. Neural operators can be used as surrogates in design problems, uncertainty quantification, autonomous systems, and almost in any application requiring real-time inference. Moreover, independently pre-trained DeepONets can be used as components of a complex multi-physics system by coupling them together with relatively light training. Here, we present a review of DeepONet, the Fourier neural operator, and the graph neural operator, as well as appropriate extensions with feature expansions, and highlight their usefulness in diverse applications in computational mechanics, including porous media, fluid mechanics, and solid mechanics.
LGApr 30, 2023Code
Domain Agnostic Fourier Neural OperatorsNing Liu, Siavash Jafarzadeh, Yue Yu
Fourier neural operators (FNOs) can learn highly nonlinear mappings between function spaces, and have recently become a popular tool for learning responses of complex physical systems. However, to achieve good accuracy and efficiency, FNOs rely on the Fast Fourier transform (FFT), which is restricted to modeling problems on rectangular domains. To lift such a restriction and permit FFT on irregular geometries as well as topology changes, we introduce domain agnostic Fourier neural operator (DAFNO), a novel neural operator architecture for learning surrogates with irregular geometries and evolving domains. The key idea is to incorporate a smoothed characteristic function in the integral layer architecture of FNOs, and leverage FFT to achieve rapid computations, in such a way that the geometric information is explicitly encoded in the architecture. In our empirical evaluation, DAFNO has achieved state-of-the-art accuracy as compared to baseline neural operator models on two benchmark datasets of material modeling and airfoil simulation. To further demonstrate the capability and generalizability of DAFNO in handling complex domains with topology changes, we consider a brittle material fracture evolution problem. With only one training crack simulation sample, DAFNO has achieved generalizability to unseen loading scenarios and substantially different crack patterns from the trained scenario. Our code and data accompanying this paper are available at https://github.com/ningliu-iga/DAFNO.
LGAug 16, 2024Code
Can Large Language Models Improve the Adversarial Robustness of Graph Neural Networks?Zhongjian Zhang, Xiao Wang, Huichi Zhou et al.
Graph neural networks (GNNs) are vulnerable to adversarial attacks, especially for topology perturbations, and many methods that improve the robustness of GNNs have received considerable attention. Recently, we have witnessed the significant success of large language models (LLMs), leading many to explore the great potential of LLMs on GNNs. However, they mainly focus on improving the performance of GNNs by utilizing LLMs to enhance the node features. Therefore, we ask: Will the robustness of GNNs also be enhanced with the powerful understanding and inference capabilities of LLMs? By presenting the empirical results, we find that despite that LLMs can improve the robustness of GNNs, there is still an average decrease of 23.1% in accuracy, implying that the GNNs remain extremely vulnerable against topology attacks. Therefore, another question is how to extend the capabilities of LLMs on graph adversarial robustness. In this paper, we propose an LLM-based robust graph structure inference framework, LLM4RGNN, which distills the inference capabilities of GPT-4 into a local LLM for identifying malicious edges and an LM-based edge predictor for finding missing important edges, so as to recover a robust graph structure. Extensive experiments demonstrate that LLM4RGNN consistently improves the robustness across various GNNs. Even in some cases where the perturbation ratio increases to 40%, the accuracy of GNNs is still better than that on the clean graph. The source code can be found in https://github.com/zhongjian-zhang/LLM4RGNN.
CLMar 18, 2022Code
PRBoost: Prompt-Based Rule Discovery and Boosting for Interactive Weakly-Supervised LearningRongzhi Zhang, Yue Yu, Pranav Shetty et al.
Weakly-supervised learning (WSL) has shown promising results in addressing label scarcity on many NLP tasks, but manually designing a comprehensive, high-quality labeling rule set is tedious and difficult. We study interactive weakly-supervised learning -- the problem of iteratively and automatically discovering novel labeling rules from data to improve the WSL model. Our proposed model, named PRBoost, achieves this goal via iterative prompt-based rule discovery and model boosting. It uses boosting to identify large-error instances and then discovers candidate rules from them by prompting pre-trained LMs with rule templates. The candidate rules are judged by human experts, and the accepted rules are used to generate complementary weak labels and strengthen the current model. Experiments on four tasks show PRBoost outperforms state-of-the-art WSL baselines up to 7.1% and bridges the gaps with fully supervised models. Our Implementation is available at \url{https://github.com/rz-zhang/PRBoost}.
CVApr 18, 2022
Modality-Balanced Embedding for Video RetrievalXun Wang, Bingqing Ke, Xuanping Li et al. · deepmind
Video search has become the main routine for users to discover videos relevant to a text query on large short-video sharing platforms. During training a query-video bi-encoder model using online search logs, we identify a modality bias phenomenon that the video encoder almost entirely relies on text matching, neglecting other modalities of the videos such as vision, audio. This modality imbalanceresults from a) modality gap: the relevance between a query and a video text is much easier to learn as the query is also a piece of text, with the same modality as the video text; b) data bias: most training samples can be solved solely by text matching. Here we share our practices to improve the first retrieval stage including our solution for the modality imbalance issue. We propose MBVR (short for Modality Balanced Video Retrieval) with two key components: manually generated modality-shuffled (MS) samples and a dynamic margin (DM) based on visual relevance. They can encourage the video encoder to pay balanced attentions to each modality. Through extensive experiments on a real world dataset, we show empirically that our method is both effective and efficient in solving modality bias problem. We have also deployed our MBVR in a large video platform and observed statistically significant boost over a highly optimized baseline in an A/B test and manual GSB evaluations.
AIAug 7, 2023Code
Intelligence-Endogenous Management Platform for Computing and Network ConvergenceZicong Hong, Xiaoyu Qiu, Jian Lin et al.
Massive emerging applications are driving demand for the ubiquitous deployment of computing power today. This trend not only spurs the recent popularity of the \emph{Computing and Network Convergence} (CNC), but also introduces an urgent need for the intelligentization of a management platform to coordinate changing resources and tasks in the CNC. Therefore, in this article, we present the concept of an intelligence-endogenous management platform for CNCs called \emph{CNC brain} based on artificial intelligence technologies. It aims at efficiently and automatically matching the supply and demand with high heterogeneity in a CNC via four key building blocks, i.e., perception, scheduling, adaptation, and governance, throughout the CNC's life cycle. Their functionalities, goals, and challenges are presented. To examine the effectiveness of the proposed concept and framework, we also implement a prototype for the CNC brain based on a deep reinforcement learning technology. Also, it is evaluated on a CNC testbed that integrates two open-source and popular frameworks (OpenFaas and Kubernetes) and a real-world business dataset provided by Microsoft Azure. The evaluation results prove the proposed method's effectiveness in terms of resource utilization and performance. Finally, we highlight the future research directions of the CNC brain.
CVJan 28Code
Advancing Open-source World ModelsRobbyant Team, Zelin Gao, Qiuyu Wang et al.
We present LingBot-World, an open-sourced world simulator stemming from video generation. Positioned as a top-tier world model, LingBot-World offers the following features. (1) It maintains high fidelity and robust dynamics in a broad spectrum of environments, including realism, scientific contexts, cartoon styles, and beyond. (2) It enables a minute-level horizon while preserving contextual consistency over time, which is also known as "long-term memory". (3) It supports real-time interactivity, achieving a latency of under 1 second when producing 16 frames per second. We provide public access to the code and model in an effort to narrow the divide between open-source and closed-source technologies. We believe our release will empower the community with practical applications across areas like content creation, gaming, and robot learning.
NAJun 3
Convergence of parallel overlapping domain decomposition methods with impedance boundary conditions for time-harmonic Maxwell equations in heterogeneous mediaLuyu Cen, Shihua Gong, Euan A. Spence et al.
This paper analyzes the convergence of parallel overlapping domain-decomposition methods with impedance boundary conditions for the time-harmonic Maxwell equations in heterogeneous media. We prove that the parallel iterative method is well-posed in an appropriate function space, and characterize the error propagation operator through impedance-to-impedance maps that describe interactions between neighboring subdomains. For strip domain decompositions, we derive explicit convergence estimates in terms of the norms of the impedance-to-impedance maps. At the discrete level, we develop the finite-element counterpart of these results based on Nédélec-element discretisations. Under the assumption that the discrete impedance-to-impedance maps approximate their continuous counterparts as the mesh is refined, we show that the discrete method inherits the convergence behavior of the continuous method. We illustrate this theory with numerical experiments for strip domain decompositions, and also present numerical experiments for checkerboard domain decompositions that go beyond our theory.
CLNov 9, 2022
Few-Shot Character Understanding in Movies as an Assessment to Meta-Learning of Theory-of-MindMo Yu, Qiujing Wang, Shunchi Zhang et al. · ibm-research
When reading a story, humans can quickly understand new fictional characters with a few observations, mainly by drawing analogies to fictional and real people they already know. This reflects the few-shot and meta-learning essence of humans' inference of characters' mental states, i.e., theory-of-mind (ToM), which is largely ignored in existing research. We fill this gap with a novel NLP dataset, ToM-in-AMC, the first assessment of machines' meta-learning of ToM in a realistic narrative understanding scenario. Our dataset consists of ~1,000 parsed movie scripts, each corresponding to a few-shot character understanding task that requires models to mimic humans' ability of fast digesting characters with a few starting scenes in a new movie. We propose a novel ToM prompting approach designed to explicitly assess the influence of multiple ToM dimensions. It surpasses existing baseline models, underscoring the significance of modeling multiple ToM dimensions for our task. Our extensive human study verifies that humans are capable of solving our problem by inferring characters' mental states based on their previously seen movies. In comparison, our systems based on either state-of-the-art large language models (GPT-4) or meta-learning algorithms lags >20% behind, highlighting a notable limitation in existing approaches' ToM capabilities.
LGJan 28, 2023
MetaNO: How to Transfer Your Knowledge on Learning Hidden PhysicsLu Zhang, Huaiqian You, Tian Gao et al. · ibm-research
Gradient-based meta-learning methods have primarily been applied to classical machine learning tasks such as image classification. Recently, PDE-solving deep learning methods, such as neural operators, are starting to make an important impact on learning and predicting the response of a complex physical system directly from observational data. Since the data acquisition in this context is commonly challenging and costly, the call of utilization and transfer of existing knowledge to new and unseen physical systems is even more acute. Herein, we propose a novel meta-learning approach for neural operators, which can be seen as transferring the knowledge of solution operators between governing (unknown) PDEs with varying parameter fields. Our approach is a provably universal solution operator for multiple PDE solving tasks, with a key theoretical observation that underlying parameter fields can be captured in the first layer of neural operator models, in contrast to typical final-layer transfer in existing meta-learning methods. As applications, we demonstrate the efficacy of our proposed approach on PDE-based datasets and a real-world material modeling problem, illustrating that our method can handle complex and nonlinear physical response learning tasks while greatly improving the sampling efficiency in unseen tasks.
CLJun 23, 2023
ToolQA: A Dataset for LLM Question Answering with External ToolsYuchen Zhuang, Yue Yu, Kuan Wang et al.
Large Language Models (LLMs) have demonstrated impressive performance in various NLP tasks, but they still suffer from challenges such as hallucination and weak numerical reasoning. To overcome these challenges, external tools can be used to enhance LLMs' question-answering abilities. However, current evaluation methods do not distinguish between questions that can be answered using LLMs' internal knowledge and those that require external information through tool use. To address this issue, we introduce a new dataset called ToolQA, which is designed to faithfully evaluate LLMs' ability to use external tools for question answering. Our development of ToolQA involved a scalable, automated process for dataset curation, along with 13 specialized tools designed for interaction with external knowledge in order to answer questions. Importantly, we strive to minimize the overlap between our benchmark data and LLMs' pre-training data, enabling a more precise evaluation of LLMs' tool-use reasoning abilities. We conducted an in-depth diagnosis of existing tool-use LLMs to highlight their strengths, weaknesses, and potential improvements. Our findings set a new benchmark for evaluating LLMs and suggest new directions for future advancements. Our data and code are freely available to the broader scientific community on GitHub.
CLNov 14, 2025Code
MiroThinker: Pushing the Performance Boundaries of Open-Source Research Agents via Model, Context, and Interactive ScalingMiroMind Team, Song Bai, Lidong Bing et al.
We present MiroThinker v1.0, an open-source research agent designed to advance tool-augmented reasoning and information-seeking capabilities. Unlike previous agents that only scale up model size or context length, MiroThinker explores interaction scaling at the model level, systematically training the model to handle deeper and more frequent agent-environment interactions as a third dimension of performance improvement. Unlike LLM test-time scaling, which operates in isolation and risks degradation with longer reasoning chains, interactive scaling leverages environment feedback and external information acquisition to correct errors and refine trajectories. Through reinforcement learning, the model achieves efficient interaction scaling: with a 256K context window, it can perform up to 600 tool calls per task, enabling sustained multi-turn reasoning and complex real-world research workflows. Across four representative benchmarks-GAIA, HLE, BrowseComp, and BrowseComp-ZH-the 72B variant achieves up to 81.9%, 37.7%, 47.1%, and 55.6% accuracy respectively, surpassing previous open-source agents and approaching commercial counterparts such as GPT-5-high. Our analysis reveals that MiroThinker benefits from interactive scaling consistently: research performance improves predictably as the model engages in deeper and more frequent agent-environment interactions, demonstrating that interaction depth exhibits scaling behaviors analogous to model size and context length. These findings establish interaction scaling as a third critical dimension for building next-generation open research agents, complementing model capacity and context windows.
LGJun 5, 2023
Local Boosting for Weakly-Supervised LearningRongzhi Zhang, Yue Yu, Jiaming Shen et al. · deepmind
Boosting is a commonly used technique to enhance the performance of a set of base models by combining them into a strong ensemble model. Though widely adopted, boosting is typically used in supervised learning where the data is labeled accurately. However, in weakly supervised learning, where most of the data is labeled through weak and noisy sources, it remains nontrivial to design effective boosting approaches. In this work, we show that the standard implementation of the convex combination of base learners can hardly work due to the presence of noisy labels. Instead, we propose $\textit{LocalBoost}$, a novel framework for weakly-supervised boosting. LocalBoost iteratively boosts the ensemble model from two dimensions, i.e., intra-source and inter-source. The intra-source boosting introduces locality to the base learners and enables each base learner to focus on a particular feature regime by training new base learners on granularity-varying error regions. For the inter-source boosting, we leverage a conditional function to indicate the weak source where the sample is more likely to appear. To account for the weak labels, we further design an estimate-then-modify approach to compute the model weights. Experiments on seven datasets show that our method significantly outperforms vanilla boosting methods and other weakly-supervised methods.
IVAug 11, 2022Code
OpenMedIA: Open-Source Medical Image Analysis Toolbox and Benchmark under Heterogeneous AI Computing PlatformsJia-Xin Zhuang, Xiansong Huang, Yang Yang et al.
In this paper, we present OpenMedIA, an open-source toolbox library containing a rich set of deep learning methods for medical image analysis under heterogeneous Artificial Intelligence (AI) computing platforms. Various medical image analysis methods, including 2D/3D medical image classification, segmentation, localisation, and detection, have been included in the toolbox with PyTorch and/or MindSpore implementations under heterogeneous NVIDIA and Huawei Ascend computing systems. To our best knowledge, OpenMedIA is the first open-source algorithm library providing compared PyTorch and MindSpore implementations and results on several benchmark datasets. The source codes and models are available at https://git.openi.org.cn/OpenMedIA.
CHEM-PHJun 14, 2023
MUBen: Benchmarking the Uncertainty of Molecular Representation ModelsYinghao Li, Lingkai Kong, Yuanqi Du et al. · gatech
Large molecular representation models pre-trained on massive unlabeled data have shown great success in predicting molecular properties. However, these models may tend to overfit the fine-tuning data, resulting in over-confident predictions on test data that fall outside of the training distribution. To address this issue, uncertainty quantification (UQ) methods can be used to improve the models' calibration of predictions. Although many UQ approaches exist, not all of them lead to improved performance. While some studies have included UQ to improve molecular pre-trained models, the process of selecting suitable backbone and UQ methods for reliable molecular uncertainty estimation remains underexplored. To address this gap, we present MUBen, which evaluates different UQ methods for state-of-the-art backbone molecular representation models to investigate their capabilities. By fine-tuning various backbones using different molecular descriptors as inputs with UQ methods from different categories, we assess the influence of architectural decisions and training strategies. Our study offers insights for selecting UQ for backbone models, which can facilitate research on uncertainty-critical applications in fields such as materials science and drug discovery.
LGApr 1, 2022
A Physics-Guided Neural Operator Learning Approach to Model Biological Tissues from Digital Image Correlation MeasurementsHuaiqian You, Quinn Zhang, Colton J. Ross et al.
We present a data-driven workflow to biological tissue modeling, which aims to predict the displacement field based on digital image correlation (DIC) measurements under unseen loading scenarios, without postulating a specific constitutive model form nor possessing knowledges on the material microstructure. To this end, a material database is constructed from the DIC displacement tracking measurements of multiple biaxial stretching protocols on a porcine tricuspid valve anterior leaflet, with which we build a neural operator learning model. The material response is modeled as a solution operator from the loading to the resultant displacement field, with the material microstructure properties learned implicitly from the data and naturally embedded in the network parameters. Using various combinations of loading protocols, we compare the predictivity of this framework with finite element analysis based on the phenomenological Fung-type model. From in-distribution tests, the predictivity of our approach presents good generalizability to different loading conditions and outperforms the conventional constitutive modeling at approximately one order of magnitude. When tested on out-of-distribution loading ratios, the neural operator learning approach becomes less effective. To improve the generalizability of our framework, we propose a physics-guided neural operator learning model via imposing partial physics knowledge. This method is shown to improve the model's extrapolative performance in the small-deformation regime. Our results demonstrate that with sufficient data coverage and/or guidance from partial physics constraints, the data-driven approach can be a more effective method for modeling biological materials than the traditional constitutive modeling.
LGSep 25, 2023
Provable Training for Graph Contrastive LearningYue Yu, Xiao Wang, Mengmei Zhang et al.
Graph Contrastive Learning (GCL) has emerged as a popular training approach for learning node embeddings from augmented graphs without labels. Despite the key principle that maximizing the similarity between positive node pairs while minimizing it between negative node pairs is well established, some fundamental problems are still unclear. Considering the complex graph structure, are some nodes consistently well-trained and following this principle even with different graph augmentations? Or are there some nodes more likely to be untrained across graph augmentations and violate the principle? How to distinguish these nodes and further guide the training of GCL? To answer these questions, we first present experimental evidence showing that the training of GCL is indeed imbalanced across all nodes. To address this problem, we propose the metric "node compactness", which is the lower bound of how a node follows the GCL principle related to the range of augmentations. We further derive the form of node compactness theoretically through bound propagation, which can be integrated into binary cross-entropy as a regularization. To this end, we propose the PrOvable Training (POT) for GCL, which regularizes the training of GCL to encode node embeddings that follows the GCL principle better. Through extensive experiments on various benchmarks, POT consistently improves the existing GCL approaches, serving as a friendly plugin.
LGMar 15, 2022
Learning Deep Implicit Fourier Neural Operators (IFNOs) with Applications to Heterogeneous Material ModelingHuaiqian You, Quinn Zhang, Colton J. Ross et al.
Constitutive modeling based on continuum mechanics theory has been a classical approach for modeling the mechanical responses of materials. However, when constitutive laws are unknown or when defects and/or high degrees of heterogeneity are present, these classical models may become inaccurate. In this work, we propose to use data-driven modeling, which directly utilizes high-fidelity simulation and/or experimental measurements to predict a material's response without using conventional constitutive models. Specifically, the material response is modeled by learning the implicit mappings between loading conditions and the resultant displacement and/or damage fields, with the neural network serving as a surrogate for a solution operator. To model the complex responses due to material heterogeneity and defects, we develop a novel deep neural operator architecture, which we coin as the Implicit Fourier Neural Operator (IFNO). In the IFNO, the increment between layers is modeled as an integral operator to capture the long-range dependencies in the feature space. As the network gets deeper, the limit of IFNO becomes a fixed point equation that yields an implicit neural operator and naturally mimics the displacement/damage fields solving procedure in material modeling problems. We demonstrate the performance of our proposed method for a number of examples, including hyperelastic, anisotropic and brittle materials. As an application, we further employ the proposed approach to learn the material models directly from digital image correlation (DIC) tracking measurements, and show that the learned solution operators substantially outperform the conventional constitutive models in predicting displacement fields.
CVJul 8, 2024Code
Mamba-FSCIL: Dynamic Adaptation with Selective State Space Model for Few-Shot Class-Incremental LearningXiaojie Li, Yibo Yang, Jianlong Wu et al.
Few-shot class-incremental learning (FSCIL) aims to incrementally learn novel classes from limited examples while preserving knowledge of previously learned classes. Existing methods face a critical dilemma: static architectures rely on a fixed parameter space to learn from data that arrive sequentially, prone to overfitting to the current session, while dynamic architectures require the expansion of the parameter space continually, leading to increased complexity. In this study, we explore the potential of Selective State Space Models (SSMs) for FSCIL. Mamba leverages its input-dependent parameters to dynamically adjust its processing patterns and generate content-aware scan patterns within a fixed architecture. This enables it to configure distinct processing for base and novel classes, effectively preserving existing knowledge while adapting to new ones. To leverage Mamba's potential for FSCIL, we design two key modules: First, we propose a dual selective SSM projector that dynamically adjusts the projection parameters based on the intermediate features for dynamic adaptation. The dual-design structurally decouples base and novel class processing with a frozen base branch, employing a frozen base branch to maintain robust base-class features and a dynamic incremental branch that adaptively learns distinctive feature shifts for novel classes. Second, we develop a class-sensitive selective scan mechanism to guide dynamic adaptation of the incremental branch. It minimizes the disruption to base-class representations caused by training on novel data, and meanwhile, forces the selective scan to perform in distinct patterns between base and novel classes. Extensive experiments on miniImageNet, CUB-200, and CIFAR-100 demonstrate that Mamba-FSCIL achieves state-of-the-art performance. The code is available at https://github.com/xiaojieli0903/Mamba-FSCIL.
CLDec 29, 2025Code
MiMo-Audio: Audio Language Models are Few-Shot LearnersXiaomi LLM-Core Team, Dong Zhang, Gang Wang et al.
Existing audio language models typically rely on task-specific fine-tuning to accomplish particular audio tasks. In contrast, humans are able to generalize to new audio tasks with only a few examples or simple instructions. GPT-3 has shown that scaling next-token prediction pretraining enables strong generalization capabilities in text, and we believe this paradigm is equally applicable to the audio domain. By scaling MiMo-Audio's pretraining data to over one hundred million of hours, we observe the emergence of few-shot learning capabilities across a diverse set of audio tasks. We develop a systematic evaluation of these capabilities and find that MiMo-Audio-7B-Base achieves SOTA performance on both speech intelligence and audio understanding benchmarks among open-source models. Beyond standard metrics, MiMo-Audio-7B-Base generalizes to tasks absent from its training data, such as voice conversion, style transfer, and speech editing. MiMo-Audio-7B-Base also demonstrates powerful speech continuation capabilities, capable of generating highly realistic talk shows, recitations, livestreaming and debates. At the post-training stage, we curate a diverse instruction-tuning corpus and introduce thinking mechanisms into both audio understanding and generation. MiMo-Audio-7B-Instruct achieves open-source SOTA on audio understanding benchmarks (MMSU, MMAU, MMAR, MMAU-Pro), spoken dialogue benchmarks (Big Bench Audio, MultiChallenge Audio) and instruct-TTS evaluations, approaching or surpassing closed-source models. Model checkpoints and full evaluation suite are available at https://github.com/XiaomiMiMo/MiMo-Audio.
NAJan 13, 2018
An asymptotically compatible meshfree quadrature rule for non-local problems with applications to peridynamicsNathaniel Trask, Huaiqian You, Yue Yu et al.
We present a meshfree quadrature rule for compactly supported non-local integro-differential equations (IDEs) with radial kernels. We apply this rule to develop a strong-form meshfree discretization of a peridynamic solid mechanics model that requires no background mesh. Existing discretizations of peridynamic models have been shown to exhibit a lack of asymptotic compatibility to the corresponding linearly elastic local solution. By posing the quadrature rule as an equality constrained least squares problem, we obtain asymptotically compatible convergence via reproducability constraints. Our approach naturally handles traction-free conditions, surface effects, and damage modeling for both static and dynamic problems. We demonstrate high-order convergence to the local theory by comparing to manufactured solutions and to cases with crack singularities for which an analytic solution is available. Finally, we verify the applicability of the approach to realistic problems by reproducing high-velocity impact results from the Kalthoff-Winkler experiments.
CLOct 16, 2023Code
Bridging Code Semantic and LLMs: Semantic Chain-of-Thought Prompting for Code GenerationYingwei Ma, Yue Yu, Shanshan Li et al.
Large language models (LLMs) have showcased remarkable prowess in code generation. However, automated code generation is still challenging since it requires a high-level semantic mapping between natural language requirements and codes. Most existing LLMs-based approaches for code generation rely on decoder-only causal language models often treate codes merely as plain text tokens, i.e., feeding the requirements as a prompt input, and outputing code as flat sequence of tokens, potentially missing the rich semantic features inherent in source code. To bridge this gap, this paper proposes the "Semantic Chain-of-Thought" approach to intruduce semantic information of code, named SeCoT. Our motivation is that the semantic information of the source code (\eg data flow and control flow) describes more precise program execution behavior, intention and function. By guiding LLM consider and integrate semantic information, we can achieve a more granular understanding and representation of code, enhancing code generation accuracy. Meanwhile, while traditional techniques leveraging such semantic information require complex static or dynamic code analysis to obtain features such as data flow and control flow, SeCoT demonstrates that this process can be fully automated via the intrinsic capabilities of LLMs (i.e., in-context learning), while being generalizable and applicable to challenging domains. While SeCoT can be applied with different LLMs, this paper focuses on the powerful GPT-style models: ChatGPT(close-source model) and WizardCoder(open-source model). The experimental study on three popular DL benchmarks (i.e., HumanEval, HumanEval-ET and MBPP) shows that SeCoT can achieves state-of-the-art performance, greatly improving the potential for large models and code generation.
AIJun 7, 2023
A Review on Knowledge Graphs for Healthcare: Resources, Applications, and PromisesHejie Cui, Jiaying Lu, Ran Xu et al.
This comprehensive review aims to provide an overview of the current state of Healthcare Knowledge Graphs (HKGs), including their construction, utilization models, and applications across various healthcare and biomedical research domains. We thoroughly analyzed existing literature on HKGs, covering their construction methodologies, utilization techniques, and applications in basic science research, pharmaceutical research and development, clinical decision support, and public health. The review encompasses both model-free and model-based utilization approaches and the integration of HKGs with large language models (LLMs). We searched Google Scholar for relevant papers on HKGs and classified them into the following topics: HKG construction, HKG utilization, and their downstream applications in various domains. We also discussed their special challenges and the promise for future work. The review highlights the potential of HKGs to significantly impact biomedical research and clinical practice by integrating vast amounts of biomedical knowledge from multiple domains. The synergy between HKGs and LLMs offers promising opportunities for constructing more comprehensive knowledge graphs and improving the accuracy of healthcare applications. HKGs have emerged as a powerful tool for structuring medical knowledge, with broad applications across biomedical research, clinical decision-making, and public health. This survey serves as a roadmap for future research and development in the field of HKGs, highlighting the potential of combining knowledge graphs with advanced machine learning models for healthcare transformation.
LGMay 19, 2022
Nebula-I: A General Framework for Collaboratively Training Deep Learning Models on Low-Bandwidth Cloud ClustersYang Xiang, Zhihua Wu, Weibao Gong et al.
The ever-growing model size and scale of compute have attracted increasing interests in training deep learning models over multiple nodes. However, when it comes to training on cloud clusters, especially across remote clusters, huge challenges are faced. In this work, we introduce a general framework, Nebula-I, for collaboratively training deep learning models over remote heterogeneous clusters, the connections between which are low-bandwidth wide area networks (WANs). We took natural language processing (NLP) as an example to show how Nebula-I works in different training phases that include: a) pre-training a multilingual language model using two remote clusters; and b) fine-tuning a machine translation model using knowledge distilled from pre-trained models, which run through the most popular paradigm of recent deep learning. To balance the accuracy and communication efficiency, in Nebula-I, parameter-efficient training strategies, hybrid parallel computing methods and adaptive communication acceleration techniques are jointly applied. Meanwhile, security strategies are employed to guarantee the safety, reliability and privacy in intra-cluster computation and inter-cluster communication. Nebula-I is implemented with the PaddlePaddle deep learning framework, which can support collaborative training over heterogeneous hardware, e.g. GPU and NPU. Experiments demonstrate that the proposed framework could substantially maximize the training efficiency while preserving satisfactory NLP performance. By using Nebula-I, users can run large-scale training tasks over cloud clusters with minimum developments, and the utility of existed large pre-trained models could be further promoted. We also introduced new state-of-the-art results on cross-lingual natural language inference tasks, which are generated based upon a novel learning framework and Nebula-I.
MTRL-SCIJan 11, 2023
Towards a unified nonlocal, peridynamics framework for the coarse-graining of molecular dynamics data with fracturesHuaiqian You, Xiao Xu, Yue Yu et al.
Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely beyond reach. Herein, we propose a learning framework to extract a peridynamic model as a mesoscale continuum surrogate from MD simulated material fracture datasets. Firstly, we develop a novel coarse-graining method, to automatically handle the material fracture and its corresponding discontinuities in MD displacement dataset. Inspired by the Weighted Essentially Non-Oscillatory scheme, the key idea lies at an adaptive procedure to automatically choose the locally smoothest stencil, then reconstruct the coarse-grained material displacement field as piecewise smooth solutions containing discontinuities. Then, based on the coarse-grained MD data, a two-phase optimization-based learning approach is proposed to infer the optimal peridynamics model with damage criterion. In the first phase, we identify the optimal nonlocal kernel function from datasets without material damage, to capture the material stiffness properties. Then, in the second phase, the material damage criterion is learnt as a smoothed step function from the data with fractures. As a result, a peridynamics surrogate is obtained. Our peridynamics surrogate model can be employed in further prediction tasks with different grid resolutions from training, and hence allows for substantial reductions in computational cost compared with MD. We illustrate the efficacy of the proposed approach with several numerical tests for single layer graphene. Our tests show that the proposed data-driven model is robust and generalizable: it is capable in modeling the initialization and growth of fractures under discretization and loading settings that are different from the ones used during training.
GTJun 12, 2024
Coordination in Noncooperative Multiplayer Matrix Games via Reduced Rank Correlated EquilibriaJaehan Im, Yue Yu, David Fridovich-Keil et al.
Coordination in multiplayer games enables players to avoid the lose-lose outcome that often arises at Nash equilibria. However, designing a coordination mechanism typically requires the consideration of the joint actions of all players, which becomes intractable in large-scale games. We develop a novel coordination mechanism, termed reduced rank correlated equilibria, which reduces the number of joint actions to be considered and thereby mitigates computational complexity. The idea is to approximate the set of all joint actions with the actions used in a set of pre-computed Nash equilibria via a convex hull operation. In a game with n players and each player having m actions, the proposed mechanism reduces the number of joint actions considered from O(m^n) to O(mn). We demonstrate the application of the proposed mechanism to an air traffic queue management problem. Compared with the correlated equilibrium-a popular benchmark coordination mechanism-the proposed approach is capable of solving a problem involving four thousand times more joint actions while yielding similar or better performance in terms of a fairness indicator and showing a maximum optimality gap of 0.066% in terms of the average delay cost. In the meantime, it yields a solution that shows up to 99.5% improvement in a fairness indicator and up to 50.4% reduction in average delay cost compared to the Nash solution, which does not involve coordination.
IRMar 23Code
C$^2$-Cite: Contextual-Aware Citation Generation for Attributed Large Language ModelsYue Yu, Ting Bai, HengZhi Lan et al.
The attribution technique enhances the credibility of LLMs by adding citations to the generated sentences, enabling users to trace back to the original sources and verify the reliability of the output. However, existing instruction-tuned attributed LLMs often fail to properly interpret the contextual semantics of citation symbols (e.g., [i]) during text generation. This shortcoming arises from their insufficient awareness of the context information surrounding citation markers, which in turn leads to disjointed references and poor integration of retrieved knowledge into the generated content. To address this issue, we propose a novel \textbf{C}ontextual-aware \textbf{C}itation generation framework (\textbf{C$^2$}-\textbf{Cite}) that explicitly integrates the semantic relationships between citation markers and their referenced content. Specifically, a contextual citation alignment mechanism is adopted: it first encodes the retrieved document contexts into the symbol representation of citations, then aligns the marker numbers by decoding information from a citation router function. This mechanism enables the transformation of citation markers from generic placeholders into active knowledge pointers that link to the referenced source information. Experimental results on the ALCE benchmark across three datasets validate our framework C$^2$-Cite++: it outperforms the SOTA baseline by an average of 5.8\% in citation quality and 17.4\% in response correctness. The implementation is publicly available at https://github.com/BAI-LAB/c2cite
GTAug 15, 2023
Active Inverse Learning in Stackelberg Trajectory GamesWilliam Ward, Yue Yu, Jacob Levy et al.
Game-theoretic inverse learning is the problem of inferring a player's objectives from their actions. We formulate an inverse learning problem in a Stackelberg game between a leader and a follower, where each player's action is the trajectory of a dynamical system. We propose an active inverse learning method for the leader to infer which hypothesis among a finite set of candidates best describes the follower's objective function. Instead of using passively observed trajectories like existing methods, we actively maximize the differences in the follower's trajectories under different hypotheses by optimizing the leader's control inputs. Compared with uniformly random inputs, the optimized inputs accelerate the convergence of the estimated probability of different hypotheses conditioned on the follower's trajectory. We demonstrate the proposed method in a receding-horizon repeated trajectory game and simulate the results using virtual TurtleBots in Gazebo.
CRJun 26, 2023
Practical Privacy-Preserving Gaussian Process Regression via Secret SharingJinglong Luo, Yehong Zhang, Jiaqi Zhang et al.
Gaussian process regression (GPR) is a non-parametric model that has been used in many real-world applications that involve sensitive personal data (e.g., healthcare, finance, etc.) from multiple data owners. To fully and securely exploit the value of different data sources, this paper proposes a privacy-preserving GPR method based on secret sharing (SS), a secure multi-party computation (SMPC) technique. In contrast to existing studies that protect the data privacy of GPR via homomorphic encryption, differential privacy, or federated learning, our proposed method is more practical and can be used to preserve the data privacy of both the model inputs and outputs for various data-sharing scenarios (e.g., horizontally/vertically-partitioned data). However, it is non-trivial to directly apply SS on the conventional GPR algorithm, as it includes some operations whose accuracy and/or efficiency have not been well-enhanced in the current SMPC protocol. To address this issue, we derive a new SS-based exponentiation operation through the idea of 'confusion-correction' and construct an SS-based matrix inversion algorithm based on Cholesky decomposition. More importantly, we theoretically analyze the communication cost and the security of the proposed SS-based operations. Empirical results show that our proposed method can achieve reasonable accuracy and efficiency under the premise of preserving data privacy.
MTRL-SCIJun 4, 2022
MetaNOR: A Meta-Learnt Nonlocal Operator Regression Approach for Metamaterial ModelingLu Zhang, Huaiqian You, Yue Yu
We propose MetaNOR, a meta-learnt approach for transfer-learning operators based on the nonlocal operator regression. The overall goal is to efficiently provide surrogate models for new and unknown material-learning tasks with different microstructures. The algorithm consists of two phases: (1) learning a common nonlocal kernel representation from existing tasks; (2) transferring the learned knowledge and rapidly learning surrogate operators for unseen tasks with a different material, where only a few test samples are required. We apply MetaNOR to model the wave propagation within 1D metamaterials, showing substantial improvements on the sampling efficiency for new materials.
LGJun 5, 2023
R-Mixup: Riemannian Mixup for Biological NetworksXuan Kan, Zimu Li, Hejie Cui et al.
Biological networks are commonly used in biomedical and healthcare domains to effectively model the structure of complex biological systems with interactions linking biological entities. However, due to their characteristics of high dimensionality and low sample size, directly applying deep learning models on biological networks usually faces severe overfitting. In this work, we propose R-MIXUP, a Mixup-based data augmentation technique that suits the symmetric positive definite (SPD) property of adjacency matrices from biological networks with optimized training efficiency. The interpolation process in R-MIXUP leverages the log-Euclidean distance metrics from the Riemannian manifold, effectively addressing the swelling effect and arbitrarily incorrect label issues of vanilla Mixup. We demonstrate the effectiveness of R-MIXUP with five real-world biological network datasets on both regression and classification tasks. Besides, we derive a commonly ignored necessary condition for identifying the SPD matrices of biological networks and empirically study its influence on the model performance. The code implementation can be found in Appendix E.
CLNov 13, 2023
Explanation-aware Soft Ensemble Empowers Large Language Model In-context LearningYue Yu, Jiaming Shen, Tianqi Liu et al.
Large language models (LLMs) have shown remarkable capabilities in various natural language understanding tasks. With only a few demonstration examples, these LLMs can quickly adapt to target tasks without expensive gradient updates. Common strategies to boost such 'in-context' learning ability are to ensemble multiple model decoded results and require the model to generate an explanation along with the prediction. However, these models often treat different class predictions equally and neglect the potential discrepancy between the explanations and predictions. To fully unleash the power of explanations, we propose EASE, an Explanation-Aware Soft Ensemble framework to empower in-context learning with LLMs. We design two techniques, explanation-guided ensemble, and soft probability aggregation, to mitigate the effect of unreliable explanations and improve the consistency between explanations and final predictions. Experiments on seven natural language understanding tasks and four varying-size LLMs demonstrate the effectiveness of our proposed framework.
MTRL-SCIOct 6, 2022
Bayesian Nonlocal Operator Regression (BNOR): A Data-Driven Learning Framework of Nonlocal Models with Uncertainty QuantificationYiming Fan, Marta D'Elia, Yue Yu et al.
We consider the problem of modeling heterogeneous materials where micro-scale dynamics and interactions affect global behavior. In the presence of heterogeneities in material microstructure it is often impractical, if not impossible, to provide quantitative characterization of material response. The goal of this work is to develop a Bayesian framework for uncertainty quantification (UQ) in material response prediction when using nonlocal models. Our approach combines the nonlocal operator regression (NOR) technique and Bayesian inference. Specifically, we use a Markov chain Monte Carlo (MCMC) method to sample the posterior probability distribution on parameters involved in the nonlocal constitutive law, and associated modeling discrepancies relative to higher fidelity computations. As an application, we consider the propagation of stress waves through a one-dimensional heterogeneous bar with randomly generated microstructure. Several numerical tests illustrate the construction, enabling UQ in nonlocal model predictions. Although nonlocal models have become popular means for homogenization, their statistical calibration with respect to high-fidelity models has not been presented before. This work is a first step towards statistical characterization of nonlocal model discrepancy in the context of homogenization.
MLMay 23, 2022
Nonparametric learning of kernels in nonlocal operatorsFei Lu, Qingci An, Yue Yu
Nonlocal operators with integral kernels have become a popular tool for designing solution maps between function spaces, due to their efficiency in representing long-range dependence and the attractive feature of being resolution-invariant. In this work, we provide a rigorous identifiability analysis and convergence study for the learning of kernels in nonlocal operators. It is found that the kernel learning is an ill-posed or even ill-defined inverse problem, leading to divergent estimators in the presence of modeling errors or measurement noises. To resolve this issue, we propose a nonparametric regression algorithm with a novel data adaptive RKHS Tikhonov regularization method based on the function space of identifiability. The method yields a noisy-robust convergent estimator of the kernel as the data resolution refines, on both synthetic and real-world datasets. In particular, the method successfully learns a homogenized model for the stress wave propagation in a heterogeneous solid, revealing the unknown governing laws from real-world data at microscale. Our regularization method outperforms baseline methods in robustness, generalizability and accuracy.
LGJul 5, 2023
Personalized Federated Learning via Amortized Bayesian Meta-LearningShiyu Liu, Shaogao Lv, Dun Zeng et al.
Federated learning is a decentralized and privacy-preserving technique that enables multiple clients to collaborate with a server to learn a global model without exposing their private data. However, the presence of statistical heterogeneity among clients poses a challenge, as the global model may struggle to perform well on each client's specific task. To address this issue, we introduce a new perspective on personalized federated learning through Amortized Bayesian Meta-Learning. Specifically, we propose a novel algorithm called \emph{FedABML}, which employs hierarchical variational inference across clients. The global prior aims to capture representations of common intrinsic structures from heterogeneous clients, which can then be transferred to their respective tasks and aid in the generation of accurate client-specific approximate posteriors through a few local updates. Our theoretical analysis provides an upper bound on the average generalization error and guarantees the generalization performance on unseen data. Finally, several empirical results are implemented to demonstrate that \emph{FedABML} outperforms several competitive baselines.
GTMar 31, 2023
Soft-Bellman Equilibrium in Affine Markov Games: Forward Solutions and Inverse LearningShenghui Chen, Yue Yu, David Fridovich-Keil et al.
Markov games model interactions among multiple players in a stochastic, dynamic environment. Each player in a Markov game maximizes its expected total discounted reward, which depends upon the policies of the other players. We formulate a class of Markov games, termed affine Markov games, where an affine reward function couples the players' actions. We introduce a novel solution concept, the soft-Bellman equilibrium, where each player is boundedly rational and chooses a soft-Bellman policy rather than a purely rational policy as in the well-known Nash equilibrium concept. We provide conditions for the existence and uniqueness of the soft-Bellman equilibrium and propose a nonlinear least-squares algorithm to compute such an equilibrium in the forward problem. We then solve the inverse game problem of inferring the players' reward parameters from observed state-action trajectories via a projected-gradient algorithm. Experiments in a predator-prey OpenAI Gym environment show that the reward parameters inferred by the proposed algorithm outperform those inferred by a baseline algorithm: they reduce the Kullback-Leibler divergence between the equilibrium policies and observed policies by at least two orders of magnitude.
LGDec 29, 2022
INO: Invariant Neural Operators for Learning Complex Physical Systems with Momentum ConservationNing Liu, Yue Yu, Huaiqian You et al.
Neural operators, which emerge as implicit solution operators of hidden governing equations, have recently become popular tools for learning responses of complex real-world physical systems. Nevertheless, the majority of neural operator applications has thus far been data-driven, which neglects the intrinsic preservation of fundamental physical laws in data. In this paper, we introduce a novel integral neural operator architecture, to learn physical models with fundamental conservation laws automatically guaranteed. In particular, by replacing the frame-dependent position information with its invariant counterpart in the kernel space, the proposed neural operator is by design translation- and rotation-invariant, and consequently abides by the conservation laws of linear and angular momentums. As applications, we demonstrate the expressivity and efficacy of our model in learning complex material behaviors from both synthetic and experimental datasets, and show that, by automatically satisfying these essential physical laws, our learned neural operator is not only generalizable in handling translated and rotated datasets, but also achieves state-of-the-art accuracy and efficiency as compared to baseline neural operator models.