Faming Liang

Siqi Liang, Yan Sun, Faming Liang

Sufficient dimension reduction is a powerful tool to extract core information hidden in the high-dimensional data and has potentially many important applications in machine learning tasks. However, the existing nonlinear sufficient dimension reduction methods often lack the scalability necessary for dealing with large-scale data. We propose a new type of stochastic neural network under a rigorous probabilistic framework and show that it can be used for sufficient dimension reduction for large-scale data. The proposed stochastic neural network is trained using an adaptive stochastic gradient Markov chain Monte Carlo algorithm, whose convergence is rigorously studied in the paper as well. Through extensive experiments on real-world classification and regression problems, we show that the proposed method compares favorably with the existing state-of-the-art sufficient dimension reduction methods and is computationally more efficient for large-scale data.

Wei Deng, Qian Zhang, Qi Feng et al.

Parallel tempering (PT), also known as replica exchange, is the go-to workhorse for simulations of multi-modal distributions. The key to the success of PT is to adopt efficient swap schemes. The popular deterministic even-odd (DEO) scheme exploits the non-reversibility property and has successfully reduced the communication cost from $O(P^2)$ to $O(P)$ given sufficiently many $P$ chains. However, such an innovation largely disappears in big data due to the limited chains and few bias-corrected swaps. To handle this issue, we generalize the DEO scheme to promote non-reversibility and propose a few solutions to tackle the underlying bias caused by the geometric stopping time. Notably, in big data scenarios, we obtain an appealing communication cost $O(P\log P)$ based on the optimal window size. In addition, we also adopt stochastic gradient descent (SGD) with large and constant learning rates as exploration kernels. Such a user-friendly nature enables us to conduct approximation tasks for complex posteriors without much tuning costs.

Sehwan Kim, Qifan Song, Faming Liang

The Generative Adversarial Network (GAN) was recently introduced in the literature as a novel machine learning method for training generative models. It has many applications in statistics such as nonparametric clustering and nonparametric conditional independence tests. However, training the GAN is notoriously difficult due to the issue of mode collapse, which refers to the lack of diversity among generated data. In this paper, we identify the reasons why the GAN suffers from this issue, and to address it, we propose a new formulation for the GAN based on randomized decision rules. In the new formulation, the discriminator converges to a fixed point while the generator converges to a distribution at the Nash equilibrium. We propose to train the GAN by an empirical Bayes-like method by treating the discriminator as a hyper-parameter of the posterior distribution of the generator. Specifically, we simulate generators from its posterior distribution conditioned on the discriminator using a stochastic gradient Markov chain Monte Carlo (MCMC) algorithm, and update the discriminator using stochastic gradient descent along with simulations of the generators. We establish convergence of the proposed method to the Nash equilibrium. Apart from image generation, we apply the proposed method to nonparametric clustering and nonparametric conditional independence tests. A portion of the numerical results is presented in the supplementary material.

Faming Liang, Sehwan Kim, Yan Sun

While fiducial inference was widely considered a big blunder by R.A. Fisher, the goal he initially set --`inferring the uncertainty of model parameters on the basis of observations' -- has been continually pursued by many statisticians. To this end, we develop a new statistical inference method called extended Fiducial inference (EFI). The new method achieves the goal of fiducial inference by leveraging advanced statistical computing techniques while remaining scalable for big data. EFI involves jointly imputing random errors realized in observations using stochastic gradient Markov chain Monte Carlo and estimating the inverse function using a sparse deep neural network (DNN). The consistency of the sparse DNN estimator ensures that the uncertainty embedded in observations is properly propagated to model parameters through the estimated inverse function, thereby validating downstream statistical inference. Compared to frequentist and Bayesian methods, EFI offers significant advantages in parameter estimation and hypothesis testing. Specifically, EFI provides higher fidelity in parameter estimation, especially when outliers are present in the observations; and eliminates the need for theoretical reference distributions in hypothesis testing, thereby automating the statistical inference process. EFI also provides an innovative framework for semi-supervised learning.

Mingxuan Zhang, Yan Sun, Faming Liang

Sparse deep learning has become a popular technique for improving the performance of deep neural networks in areas such as uncertainty quantification, variable selection, and large-scale network compression. However, most existing research has focused on problems where the observations are independent and identically distributed (i.i.d.), and there has been little work on the problems where the observations are dependent, such as time series data and sequential data in natural language processing. This paper aims to address this gap by studying the theory for sparse deep learning with dependent data. We show that sparse recurrent neural networks (RNNs) can be consistently estimated, and their predictions are asymptotically normally distributed under appropriate assumptions, enabling the prediction uncertainty to be correctly quantified. Our numerical results show that sparse deep learning outperforms state-of-the-art methods, such as conformal predictions, in prediction uncertainty quantification for time series data. Furthermore, our results indicate that the proposed method can consistently identify the autoregressive order for time series data and outperform existing methods in large-scale model compression. Our proposed method has important practical implications in fields such as finance, healthcare, and energy, where both accurate point estimates and prediction uncertainty quantification are of concern.

Yaxin Fang, Faming Liang

With the advancement of data science, the collection of increasingly complex datasets has become commonplace. In such datasets, the data dimension can be extremely high, and the underlying data generation process can be unknown and highly nonlinear. As a result, the task of making causal inference with high-dimensional complex data has become a fundamental problem in many disciplines, such as medicine, econometrics, and social science. However, the existing methods for causal inference are frequently developed under the assumption that the data dimension is low or that the underlying data generation process is linear or approximately linear. To address these challenges, this paper proposes a novel causal inference approach for dealing with high-dimensional complex data. The proposed approach is based on deep learning techniques, including sparse deep learning theory and stochastic neural networks, that have been developed in recent literature. By using these techniques, the proposed approach can address both the high dimensionality and unknown data generation process in a coherent way. Furthermore, the proposed approach can also be used when missing values are present in the datasets. Extensive numerical studies indicate that the proposed approach outperforms existing ones.

Sehwan Kim, Faming Liang

Individual treatment effect estimation has gained significant attention in recent data science literature. This work introduces the Double Neural Network (Double-NN) method to address this problem within the framework of extended fiducial inference (EFI). In the proposed method, deep neural networks are used to model the treatment and control effect functions, while an additional neural network is employed to estimate their parameters. The universal approximation capability of deep neural networks ensures the broad applicability of this method. Numerical results highlight the superior performance of the proposed Double-NN method compared to the conformal quantile regression (CQR) method in individual treatment effect estimation. From the perspective of statistical inference, this work advances the theory and methodology for statistical inference of large models. Specifically, it is theoretically proven that the proposed method permits the model size to increase with the sample size $n$ at a rate of $O(n^ζ)$ for some $0 \leq ζ<1$, while still maintaining proper quantification of uncertainty in the model parameters. This result marks a significant improvement compared to the range $0\leq ζ< \frac{1}{2}$ required by the classical central limit theorem. Furthermore, this work provides a rigorous framework for quantifying the uncertainty of deep neural networks under the neural scaling law, representing a substantial contribution to the statistical understanding of large-scale neural network models.

Frank Shih, Zhenghao Jiang, Faming Liang

Uncertainty quantification (UQ) in scientific machine learning is increasingly critical as neural networks are widely adopted to tackle complex problems across diverse scientific disciplines. For physics-informed neural networks (PINNs), a prominent model in scientific machine learning, uncertainty is typically quantified using Bayesian or dropout methods. However, both approaches suffer from a fundamental limitation: the prior distribution or dropout rate required to construct honest confidence sets cannot be determined without additional information. In this paper, we propose a novel method within the framework of extended fiducial inference (EFI) to provide rigorous uncertainty quantification for PINNs. The proposed method leverages a narrow-neck hyper-network to learn the parameters of the PINN and quantify their uncertainty based on imputed random errors in the observations. This approach overcomes the limitations of Bayesian and dropout methods, enabling the construction of honest confidence sets based solely on observed data. This advancement represents a significant breakthrough for PINNs, greatly enhancing their reliability, interpretability, and applicability to real-world scientific and engineering challenges. Moreover, it establishes a new theoretical framework for EFI, extending its application to large-scale models, eliminating the need for sparse hyper-networks, and significantly improving the automaticity and robustness of statistical inference.

Penglei Gao, Yan Zou, Abhijit Duggal et al.

We introduce the Functional Competing Risk Net (FCRN), a unified deep-learning framework for discrete-time survival analysis under competing risks, which seamlessly integrates functional covariates and handles missing data within an end-to-end model. By combining a micro-network Basis Layer for functional data representation with a gradient-based imputation module, FCRN simultaneously learns to impute missing values and predict event-specific hazards. Evaluated on multiple simulated datasets and a real-world ICU case study using the MIMIC-IV and Cleveland Clinic datasets, FCRN demonstrates substantial improvements in prediction accuracy over random survival forests and traditional competing risks models. This approach advances prognostic modeling in critical care by more effectively capturing dynamic risk factors and static predictors while accommodating irregular and incomplete data.

Yan Sun, Faming Liang

Deep learning has revolutionized modern data science. However, how to accurately quantify the uncertainty of predictions from large-scale deep neural networks (DNNs) remains an unresolved issue. To address this issue, we introduce a novel post-processing approach. This approach feeds the output from the last hidden layer of a pre-trained large-scale DNN model into a stochastic neural network (StoNet), then trains the StoNet with a sparse penalty on a validation dataset and constructs prediction intervals for future observations. We establish a theoretical guarantee for the validity of this approach; in particular, the parameter estimation consistency for the sparse StoNet is essential for the success of this approach. Comprehensive experiments demonstrate that the proposed approach can construct honest confidence intervals with shorter interval lengths compared to conformal methods and achieves better calibration compared to other post-hoc calibration techniques. Additionally, we show that the StoNet formulation provides us with a platform to adapt sparse learning theory and methods from linear models to DNNs.

Mingxuan Zhang, Yan Sun, Faming Liang

Large pretrained transformer models have revolutionized modern AI applications with their state-of-the-art performance in natural language processing (NLP). However, their substantial parameter count poses challenges for real-world deployment. To address this, researchers often reduce model size by pruning parameters based on their magnitude or sensitivity. Previous research has demonstrated the limitations of magnitude pruning, especially in the context of transfer learning for modern NLP tasks. In this paper, we introduce a new magnitude-based pruning algorithm called mixture Gaussian prior pruning (MGPP), which employs a mixture Gaussian prior for regularization. MGPP prunes non-expressive weights under the guidance of the mixture Gaussian prior, aiming to retain the model's expressive capability. Extensive evaluations across various NLP tasks, including natural language understanding, question answering, and natural language generation, demonstrate the superiority of MGPP over existing pruning methods, particularly in high sparsity settings. Additionally, we provide a theoretical justification for the consistency of the sparse transformer, shedding light on the effectiveness of the proposed pruning method.

Frank Shih, Faming Liang

Reinforcement learning (RL) tackles sequential decision-making problems by creating agents that interacts with their environment. However, existing algorithms often view these problem as static, focusing on point estimates for model parameters to maximize expected rewards, neglecting the stochastic dynamics of agent-environment interactions and the critical role of uncertainty quantification. Our research leverages the Kalman filtering paradigm to introduce a novel and scalable sampling algorithm called Langevinized Kalman Temporal-Difference (LKTD) for deep reinforcement learning. This algorithm, grounded in Stochastic Gradient Markov Chain Monte Carlo (SGMCMC), efficiently draws samples from the posterior distribution of deep neural network parameters. Under mild conditions, we prove that the posterior samples generated by the LKTD algorithm converge to a stationary distribution. This convergence not only enables us to quantify uncertainties associated with the value function and model parameters but also allows us to monitor these uncertainties during policy updates throughout the training phase. The LKTD algorithm paves the way for more robust and adaptable reinforcement learning approaches.

Wei Deng, Siqi Liang, Botao Hao et al.

We propose an interacting contour stochastic gradient Langevin dynamics (ICSGLD) sampler, an embarrassingly parallel multiple-chain contour stochastic gradient Langevin dynamics (CSGLD) sampler with efficient interactions. We show that ICSGLD can be theoretically more efficient than a single-chain CSGLD with an equivalent computational budget. We also present a novel random-field function, which facilitates the estimation of self-adapting parameters in big data and obtains free mode explorations. Empirically, we compare the proposed algorithm with popular benchmark methods for posterior sampling. The numerical results show a great potential of ICSGLD for large-scale uncertainty estimation tasks.

Yan Sun, Faming Liang

The deep neural network suffers from many fundamental issues in machine learning. For example, it often gets trapped into a local minimum in training, and its prediction uncertainty is hard to be assessed. To address these issues, we propose the so-called kernel-expanded stochastic neural network (K-StoNet) model, which incorporates support vector regression (SVR) as the first hidden layer and reformulates the neural network as a latent variable model. The former maps the input vector into an infinite dimensional feature space via a radial basis function (RBF) kernel, ensuring absence of local minima on its training loss surface. The latter breaks the high-dimensional nonconvex neural network training problem into a series of low-dimensional convex optimization problems, and enables its prediction uncertainty easily assessed. The K-StoNet can be easily trained using the imputation-regularized optimization (IRO) algorithm. Compared to traditional deep neural networks, K-StoNet possesses a theoretical guarantee to asymptotically converge to the global optimum and enables the prediction uncertainty easily assessed. The performances of the new model in training, prediction and uncertainty quantification are illustrated by simulated and real data examples.

Yan Sun, Wenjun Xiong, Faming Liang

Deep learning has powered recent successes of artificial intelligence (AI). However, the deep neural network, as the basic model of deep learning, has suffered from issues such as local traps and miscalibration. In this paper, we provide a new framework for sparse deep learning, which has the above issues addressed in a coherent way. In particular, we lay down a theoretical foundation for sparse deep learning and propose prior annealing algorithms for learning sparse neural networks. The former has successfully tamed the sparse deep neural network into the framework of statistical modeling, enabling prediction uncertainty correctly quantified. The latter can be asymptotically guaranteed to converge to the global optimum, enabling the validity of the down-stream statistical inference. Numerical result indicates the superiority of the proposed method compared to the existing ones.

Yan Sun, Qifan Song, Faming Liang

Deep learning has been the engine powering many successes of data science. However, the deep neural network (DNN), as the basic model of deep learning, is often excessively over-parameterized, causing many difficulties in training, prediction and interpretation. We propose a frequentist-like method for learning sparse DNNs and justify its consistency under the Bayesian framework: the proposed method could learn a sparse DNN with at most $O(n/\log(n))$ connections and nice theoretical guarantees such as posterior consistency, variable selection consistency and asymptotically optimal generalization bounds. In particular, we establish posterior consistency for the sparse DNN with a mixture Gaussian prior, show that the structure of the sparse DNN can be consistently determined using a Laplace approximation-based marginal posterior inclusion probability approach, and use Bayesian evidence to elicit sparse DNNs learned by an optimization method such as stochastic gradient descent in multiple runs with different initializations. The proposed method is computationally more efficient than standard Bayesian methods for large-scale sparse DNNs. The numerical results indicate that the proposed method can perform very well for large-scale network compression and high-dimensional nonlinear variable selection, both advancing interpretable machine learning.

Wei Deng, Guang Lin, Faming Liang

We propose an adaptively weighted stochastic gradient Langevin dynamics algorithm (SGLD), so-called contour stochastic gradient Langevin dynamics (CSGLD), for Bayesian learning in big data statistics. The proposed algorithm is essentially a \emph{scalable dynamic importance sampler}, which automatically \emph{flattens} the target distribution such that the simulation for a multi-modal distribution can be greatly facilitated. Theoretically, we prove a stability condition and establish the asymptotic convergence of the self-adapting parameter to a {\it unique fixed-point}, regardless of the non-convexity of the original energy function; we also present an error analysis for the weighted averaging estimators. Empirically, the CSGLD algorithm is tested on multiple benchmark datasets including CIFAR10 and CIFAR100. The numerical results indicate its superiority to avoid the local trap problem in training deep neural networks.

Wei Deng, Qi Feng, Georgios Karagiannis et al.

Replica exchange stochastic gradient Langevin dynamics (reSGLD) has shown promise in accelerating the convergence in non-convex learning; however, an excessively large correction for avoiding biases from noisy energy estimators has limited the potential of the acceleration. To address this issue, we study the variance reduction for noisy energy estimators, which promotes much more effective swaps. Theoretically, we provide a non-asymptotic analysis on the exponential acceleration for the underlying continuous-time Markov jump process; moreover, we consider a generalized Girsanov theorem which includes the change of Poisson measure to overcome the crude discretization based on the Gröwall's inequality and yields a much tighter error in the 2-Wasserstein ($\mathcal{W}_2$) distance. Numerically, we conduct extensive experiments and obtain the state-of-the-art results in optimization and uncertainty estimates for synthetic experiments and image data.

Sehwan Kim, Qifan Song, Faming Liang

Bayesian deep learning offers a principled way to address many issues concerning safety of artificial intelligence (AI), such as model uncertainty,model interpretability, and prediction bias. However, due to the lack of efficient Monte Carlo algorithms for sampling from the posterior of deep neural networks (DNNs), Bayesian deep learning has not yet powered our AI system. We propose a class of adaptive stochastic gradient Markov chain Monte Carlo (SGMCMC) algorithms, where the drift function is biased to enhance escape from saddle points and the bias is adaptively adjusted according to the gradient of past samples. We establish the convergence of the proposed algorithms under mild conditions, and demonstrate via numerical examples that the proposed algorithms can significantly outperform the existing SGMCMC algorithms, such as stochastic gradient Langevin dynamics (SGLD), stochastic gradient Hamiltonian Monte Carlo (SGHMC) and preconditioned SGLD, in both simulation and optimization tasks.

Wei Deng, Qi Feng, Liyao Gao et al.

Replica exchange Monte Carlo (reMC), also known as parallel tempering, is an important technique for accelerating the convergence of the conventional Markov Chain Monte Carlo (MCMC) algorithms. However, such a method requires the evaluation of the energy function based on the full dataset and is not scalable to big data. The naïve implementation of reMC in mini-batch settings introduces large biases, which cannot be directly extended to the stochastic gradient MCMC (SGMCMC), the standard sampling method for simulating from deep neural networks (DNNs). In this paper, we propose an adaptive replica exchange SGMCMC (reSGMCMC) to automatically correct the bias and study the corresponding properties. The analysis implies an acceleration-accuracy trade-off in the numerical discretization of a Markov jump process in a stochastic environment. Empirically, we test the algorithm through extensive experiments on various setups and obtain the state-of-the-art results on CIFAR10, CIFAR100, and SVHN in both supervised learning and semi-supervised learning tasks.

Qifan Song, Yan Sun, Mao Ye et al.

Stochastic gradient Markov chain Monte Carlo (MCMC) algorithms have received much attention in Bayesian computing for big data problems, but they are only applicable to a small class of problems for which the parameter space has a fixed dimension and the log-posterior density is differentiable with respect to the parameters. This paper proposes an extended stochastic gradient MCMC lgoriathm which, by introducing appropriate latent variables, can be applied to more general large-scale Bayesian computing problems, such as those involving dimension jumping and missing data. Numerical studies show that the proposed algorithm is highly scalable and much more efficient than traditional MCMC algorithms. The proposed algorithms have much alleviated the pain of Bayesian methods in big data computing.

Wei Deng, Xiao Zhang, Faming Liang et al.

We propose a novel adaptive empirical Bayesian method for sparse deep learning, where the sparsity is ensured via a class of self-adaptive spike-and-slab priors. The proposed method works by alternatively sampling from an adaptive hierarchical posterior distribution using stochastic gradient Markov Chain Monte Carlo (MCMC) and smoothly optimizing the hyperparameters using stochastic approximation (SA). We further prove the convergence of the proposed method to the asymptotically correct distribution under mild conditions. Empirical applications of the proposed method lead to the state-of-the-art performance on MNIST and Fashion MNIST with shallow convolutional neural networks and the state-of-the-art compression performance on CIFAR10 with Residual Networks. The proposed method also improves resistance to adversarial attacks.