Dong Nguyen-Doan

Kristian Miok, Dong Nguyen-Doan, Marko Robnik-Šikonja et al.

Due to complex experimental settings, missing values are common in biomedical data. To handle this issue, many methods have been proposed, from ignoring incomplete instances to various data imputation approaches. With the recent rise of deep neural networks, the field of missing data imputation has oriented towards modelling of the data distribution. This paper presents an approach based on Monte Carlo dropout within (Variational) Autoencoders which offers not only very good adaptation to the distribution of the data but also allows generation of new data, adapted to each specific instance. The evaluation shows that the imputation error and predictive similarity can be improved with the proposed approach.

Kristian Miok, Dong Nguyen-Doan, Daniela Zaharie et al.

For many analytical problems the challenge is to handle huge amounts of available data. However, there are data science application areas where collecting information is difficult and costly, e.g., in the study of geological phenomena, rare diseases, faults in complex systems, insurance frauds, etc. In many such cases, generators of synthetic data with the same statistical and predictive properties as the actual data allow efficient simulations and development of tools and applications. In this work, we propose the incorporation of Monte Carlo Dropout method within Autoencoder (MCD-AE) and Variational Autoencoder (MCD-VAE) as efficient generators of synthetic data sets. As the Variational Autoencoder (VAE) is one of the most popular generator techniques, we explore its similarities and differences to the proposed methods. We compare the generated data sets with the original data based on statistical properties, structural similarity, and predictive similarity. The results obtained show a strong similarity between the results of VAE, MCD-VAE and MCD-AE; however, the proposed methods are faster and can generate values similar to specific selected initial instances.