28.6MED-PHMay 13
Generating synthetic computed tomography for radiotherapy: SynthRAD2025 challenge reportViktor Rogowski, Maarten L. Terpstra, Niklas Wahl et al.
Radiation therapy (RT) requires precise dose delivery over multiple fractions, with CT fundamental for treatment planning due to its electron density information. Repeated CT acquisitions impose radiation exposure and logistical burdens, MRI lacks electron density, and cone-beam CT (CBCT) requires correction for dose calculation. Synthetic CT (sCT) generation addresses these by converting MRI or CBCT into CT-equivalent images with accurate Hounsfield Unit (HU) values, enabling MRI-only RT and CBCT-based adaptive workflows. Building on SynthRAD2023, SynthRAD2025 benchmarked sCT methods on 2,362 patients from five European centers across head and neck, thorax, and abdomen. Two tasks: MRI-to-CT (890 cases) and CBCT-to-CT (1,472 cases), evaluated via image similarity (MAE, PSNR, MS-SSIM), segmentation (Dice, HD95), and dosimetric metrics from photon and proton plans. With 803 participants and 12/13 valid submissions, Task 1 top performance reached MAE $64.8\pm21.3$ HU, PSNR $\sim$30 dB, MS-SSIM $\sim$0.936, Dice 0.79, photon $γ_{2\%/2\text{mm}}>98\%$, proton $γ\approx85\%$. Task 2 improved: MAE $48.3\pm13.4$ HU, PSNR 32.6 dB, MS-SSIM 0.968, Dice 0.86, photon $γ>99\%$, proton $γ\approx89\%$. Strong image--segmentation correlations ($ρ=0.78$--$0.79$) but moderate dose correlations confirmed image quality is insufficient as a dosimetric surrogate. Head-and-neck cases were most consistent; thoracic and abdominal cases showed greater variability. Residual errors at tissue interfaces propagate along beam paths, affecting proton dose more than photon. SynthRAD2025 demonstrates that deep learning yields clinically relevant sCTs, especially for CBCT-to-CT, while identifying persistent MRI-to-CT challenges and underscoring dose-based evaluation as essential for clinical validation.
IVOct 14, 2024
Anatomical feature-prioritized loss for enhanced MR to CT translationArthur Longuefosse, Baudouin Denis de Senneville, Gael Dournes et al.
In medical image synthesis, the precision of localized structural details is crucial, particularly when addressing specific clinical requirements such as the identification and measurement of fine structures. Traditional methods for image translation and synthesis are generally optimized for global image reconstruction but often fall short in providing the finesse required for detailed local analysis. This study represents a step toward addressing this challenge by introducing a novel anatomical feature-prioritized (AFP) loss function into the synthesis process. This method enhances reconstruction by focusing on clinically significant structures, utilizing features from a pre-trained model designed for a specific downstream task, such as the segmentation of particular anatomical regions. The AFP loss function can replace or complement global reconstruction methods, ensuring a balanced emphasis on both global image fidelity and local structural details. Various implementations of this loss function are explored, including its integration into different synthesis networks such as GAN-based and CNN-based models. Our approach is applied and evaluated in two contexts: lung MR to CT translation, focusing on high-quality reconstruction of bronchial structures, using a private dataset; and pelvis MR to CT synthesis, targeting the accurate representation of organs and muscles, utilizing a public dataset from the Synthrad2023 challenge. We leverage embeddings from pre-trained segmentation models specific to these anatomical regions to demonstrate the capability of the AFP loss to prioritize and accurately reconstruct essential features. This tailored approach shows promising potential for enhancing the specificity and practicality of medical image synthesis in clinical applications.
IVMar 12, 2024
CT evaluation of 2D and 3D holistic deep learning methods for the volumetric segmentation of airway lesionsAmel Imene Hadj Bouzid, Baudouin Denis de Senneville, Fabien Baldacci et al.
This research embarked on a comparative exploration of the holistic segmentation capabilities of Convolutional Neural Networks (CNNs) in both 2D and 3D formats, focusing on cystic fibrosis (CF) lesions. The study utilized data from two CF reference centers, covering five major CF structural changes. Initially, it compared the 2D and 3D models, highlighting the 3D model's superior capability in capturing complex features like mucus plugs and consolidations. To improve the 2D model's performance, a loss adapted to fine structures segmentation was implemented and evaluated, significantly enhancing its accuracy, though not surpassing the 3D model's performance. The models underwent further validation through external evaluation against pulmonary function tests (PFTs), confirming the robustness of the findings. Moreover, this study went beyond comparing metrics; it also included comprehensive assessments of the models' interpretability and reliability, providing valuable insights for their clinical application.
IVSep 26, 2025
Deep Learning-Based Cross-Anatomy CT Synthesis Using Adapted nnResU-Net with Anatomical Feature Prioritized LossJavier Sequeiro González, Arthur Longuefosse, Miguel Díaz Benito et al.
We present a patch-based 3D nnUNet adaptation for MR to CT and CBCT to CT image translation using the multicenter SynthRAD2025 dataset, covering head and neck (HN), thorax (TH), and abdomen (AB) regions. Our approach leverages two main network configurations: a standard UNet and a residual UNet, both adapted from nnUNet for image synthesis. The Anatomical Feature-Prioritized (AFP) loss was introduced, which compares multilayer features extracted from a compact segmentation network trained on TotalSegmentator labels, enhancing reconstruction of clinically relevant structures. Input volumes were normalized per-case using zscore normalization for MRIs, and clipping plus dataset level zscore normalization for CBCT and CT. Training used 3D patches tailored to each anatomical region without additional data augmentation. Models were trained for 1000 and 1500 epochs, with AFP fine-tuning performed for 500 epochs using a combined L1+AFP objective. During inference, overlapping patches were aggregated via mean averaging with step size of 0.3, and postprocessing included reverse zscore normalization. Both network configurations were applied across all regions, allowing consistent model design while capturing local adaptations through residual learning and AFP loss. Qualitative and quantitative evaluation revealed that residual networks combined with AFP yielded sharper reconstructions and improved anatomical fidelity, particularly for bone structures in MR to CT and lesions in CBCT to CT, while L1only networks achieved slightly better intensity-based metrics. This methodology provides a stable solution for cross modality medical image synthesis, demonstrating the effectiveness of combining the automatic nnUNet pipeline with residual learning and anatomically guided feature losses.
CLAug 2, 2025
Bridging LLMs and Symbolic Reasoning in Educational QA Systems: Insights from the XAI Challenge at IJCNN 2025Long S. T. Nguyen, Khang H. N. Vo, Thu H. A. Nguyen et al.
The growing integration of Artificial Intelligence (AI) into education has intensified the need for transparency and interpretability. While hackathons have long served as agile environments for rapid AI prototyping, few have directly addressed eXplainable AI (XAI) in real-world educational contexts. This paper presents a comprehensive analysis of the XAI Challenge 2025, a hackathon-style competition jointly organized by Ho Chi Minh City University of Technology (HCMUT) and the International Workshop on Trustworthiness and Reliability in Neurosymbolic AI (TRNS-AI), held as part of the International Joint Conference on Neural Networks (IJCNN 2025). The challenge tasked participants with building Question-Answering (QA) systems capable of answering student queries about university policies while generating clear, logic-based natural language explanations. To promote transparency and trustworthiness, solutions were required to use lightweight Large Language Models (LLMs) or hybrid LLM-symbolic systems. A high-quality dataset was provided, constructed via logic-based templates with Z3 validation and refined through expert student review to ensure alignment with real-world academic scenarios. We describe the challenge's motivation, structure, dataset construction, and evaluation protocol. Situating the competition within the broader evolution of AI hackathons, we argue that it represents a novel effort to bridge LLMs and symbolic reasoning in service of explainability. Our findings offer actionable insights for future XAI-centered educational systems and competitive research initiatives.
CVJul 24, 2025
Object segmentation in the wild with foundation models: application to vision assisted neuro-prostheses for upper limbsBolutife Atoki, Jenny Benois-Pineau, Renaud Péteri et al.
In this work, we address the problem of semantic object segmentation using foundation models. We investigate whether foundation models, trained on a large number and variety of objects, can perform object segmentation without fine-tuning on specific images containing everyday objects, but in highly cluttered visual scenes. The ''in the wild'' context is driven by the target application of vision guided upper limb neuroprostheses. We propose a method for generating prompts based on gaze fixations to guide the Segment Anything Model (SAM) in our segmentation scenario, and fine-tune it on egocentric visual data. Evaluation results of our approach show an improvement of the IoU segmentation quality metric by up to 0.51 points on real-world challenging data of Grasping-in-the-Wild corpus which is made available on the RoboFlow Platform (https://universe.roboflow.com/iwrist/grasping-in-the-wild)