8.4CVSep 25, 2025
Decipher-MR: A Vision-Language Foundation Model for 3D MRI RepresentationsZhijian Yang, Noel DSouza, Istvan Megyeri et al.
Magnetic Resonance Imaging (MRI) is a critical medical imaging modality in clinical diagnosis and research, yet its complexity and heterogeneity pose challenges for automated analysis, particularly in scalable and generalizable machine learning applications. While foundation models have revolutionized natural language and vision tasks, their application to MRI remains limited due to data scarcity and narrow anatomical focus. In this work, we present Decipher-MR, a 3D MRI-specific vision-language foundation model trained on a large-scale dataset comprising 200,000 MRI series from over 22,000 studies spanning diverse anatomical regions, sequences, and pathologies. Decipher-MR integrates self-supervised vision learning with report-guided text supervision to build robust, generalizable representations, enabling effective adaptation across broad applications. To enable robust and diverse clinical tasks with minimal computational overhead, Decipher-MR supports a modular design that enables tuning of lightweight, task-specific decoders attached to a frozen pretrained encoder. Following this setting, we evaluate Decipher-MR across diverse benchmarks including disease classification, demographic prediction, anatomical localization, and cross-modal retrieval, demonstrating consistent performance gains over existing foundation models and task-specific approaches. Our results establish Decipher-MR as a scalable and versatile foundation for MRI-based AI, facilitating efficient development across clinical and research domains.
5.1IVApr 16, 2025
Modality-Independent Explainable Detection of Inaccurate Organ Segmentations Using Denoising AutoencodersLevente Lippenszky, István Megyeri, Krisztian Koos et al.
In radiation therapy planning, inaccurate segmentations of organs at risk can result in suboptimal treatment delivery, if left undetected by the clinician. To address this challenge, we developed a denoising autoencoder-based method to detect inaccurate organ segmentations. We applied noise to ground truth organ segmentations, and the autoencoders were tasked to denoise them. Through the application of our method to organ segmentations generated on both MR and CT scans, we demonstrated that the method is independent of imaging modality. By providing reconstructions, our method offers visual information about inaccurate regions of the organ segmentations, leading to more explainable detection of suboptimal segmentations. We compared our method to existing approaches in the literature and demonstrated that it achieved superior performance for the majority of organs.
2.0IVNov 10, 2020
Pristine annotations-based multi-modal trained artificial intelligence solution to triage chest X-ray for COVID-19Tao Tan, Bipul Das, Ravi Soni et al.
The COVID-19 pandemic continues to spread and impact the well-being of the global population. The front-line modalities including computed tomography (CT) and X-ray play an important role for triaging COVID patients. Considering the limited access of resources (both hardware and trained personnel) and decontamination considerations, CT may not be ideal for triaging suspected subjects. Artificial intelligence (AI) assisted X-ray based applications for triaging and monitoring require experienced radiologists to identify COVID patients in a timely manner and to further delineate the disease region boundary are seen as a promising solution. Our proposed solution differs from existing solutions by industry and academic communities, and demonstrates a functional AI model to triage by inferencing using a single x-ray image, while the deep-learning model is trained using both X-ray and CT data. We report on how such a multi-modal training improves the solution compared to X-ray only training. The multi-modal solution increases the AUC (area under the receiver operating characteristic curve) from 0.89 to 0.93 and also positively impacts the Dice coefficient (0.59 to 0.62) for localizing the pathology. To the best our knowledge, it is the first X-ray solution by leveraging multi-modal information for the development.