Chenxuan Xie

Jiajun Zhou, Chenxuan Xie, Shengbo Gong et al.

Real-world graphs exhibit increasing heterophily, where nodes no longer tend to be connected to nodes with the same label, challenging the homophily assumption of classical graph neural networks (GNNs) and impeding their performance. Intriguingly, from the observation of heterophilous data, we notice that certain high-order information exhibits higher homophily, which motivates us to involve high-order information in node representation learning. However, common practices in GNNs to acquire high-order information mainly through increasing model depth and altering message-passing mechanisms, which, albeit effective to a certain extent, suffer from three shortcomings: 1) over-smoothing due to excessive model depth and propagation times; 2) high-order information is not fully utilized; 3) low computational efficiency. In this regard, we design a similarity-based path sampling strategy to capture smooth paths containing high-order homophily. Then we propose a lightweight model based on multi-layer perceptrons (MLP), named PathMLP, which can encode messages carried by paths via simple transformation and concatenation operations, and effectively learn node representations in heterophilous graphs through adaptive path aggregation. Extensive experiments demonstrate that our method outperforms baselines on 16 out of 20 datasets, underlining its effectiveness and superiority in alleviating the heterophily problem. In addition, our method is immune to over-smoothing and has high computational efficiency. The source code will be available in https://github.com/Graph4Sec-Team/PathMLP.

Jiajun Zhou, Chenxuan Xie, Shengbo Gong et al.

In recent years, graph representation learning has achieved remarkable success while suffering from low-quality data problems. As a mature technology to improve data quality in computer vision, data augmentation has also attracted increasing attention in graph domain. To advance research in this emerging direction, this survey provides a comprehensive review and summary of existing graph data augmentation (GDAug) techniques. Specifically, this survey first provides an overview of various feasible taxonomies and categorizes existing GDAug studies based on multi-scale graph elements. Subsequently, for each type of GDAug technique, this survey formalizes standardized technical definition, discuss the technical details, and provide schematic illustration. The survey also reviews domain-specific graph data augmentation techniques, including those for heterogeneous graphs, temporal graphs, spatio-temporal graphs, and hypergraphs. In addition, this survey provides a summary of available evaluation metrics and design guidelines for graph data augmentation. Lastly, it outlines the applications of GDAug at both the data and model levels, discusses open issues in the field, and looks forward to future directions. The latest advances in GDAug are summarized in GitHub.

Shengbo Gong, Jiajun Zhou, Chenxuan Xie et al.

Graph neural networks (GNNs) have been proved powerful in graph-oriented tasks. However, many real-world graphs are heterophilous, challenging the homophily assumption of classical GNNs. To solve the universality problem, many studies deepen networks or concatenate intermediate representations, which does not inherently change neighbor aggregation and introduces noise. Recent studies propose new metrics to characterize the homophily, but rarely consider the correlation of the proposed metrics and models. In this paper, we first design a new metric, Neighborhood Homophily (\textit{NH}), to measure the label complexity or purity in node neighborhoods. Furthermore, we incorporate the metric into the classical graph convolutional network (GCN) architecture and propose \textbf{N}eighborhood \textbf{H}omophily-based \textbf{G}raph \textbf{C}onvolutional \textbf{N}etwork (\textbf{NHGCN}). In this framework, neighbors are grouped by estimated \textit{NH} values and aggregated from different channels, and the resulting node predictions are then used in turn to estimate and update \textit{NH} values. The two processes of metric estimation and model inference are alternately optimized to achieve better node classification. NHGCN achieves top overall performance on both homophilous and heterophilous benchmarks, with an improvement of up to 7.4\% compared to the current SOTA methods.

Weizhi Zhang, Yangning Li, Yuanchen Bei et al. · pku

Information retrieval is a cornerstone of modern knowledge acquisition, enabling billions of queries each day across diverse domains. However, traditional keyword-based search engines are increasingly inadequate for handling complex, multi-step information needs. Our position is that Large Language Models (LLMs), endowed with reasoning and agentic capabilities, are ushering in a new paradigm termed Agentic Deep Research. These systems transcend conventional information search techniques by tightly integrating autonomous reasoning, iterative retrieval, and information synthesis into a dynamic feedback loop. We trace the evolution from static web search to interactive, agent-based systems that plan, explore, and learn. We also introduce a test-time scaling law to formalize the impact of computational depth on reasoning and search. Supported by benchmark results and the rise of open-source implementations, we demonstrate that Agentic Deep Research not only significantly outperforms existing approaches, but is also poised to become the dominant paradigm for future information seeking. All the related resources, including industry products, research papers, benchmark datasets, and open-source implementations, are collected for the community in https://github.com/DavidZWZ/Awesome-Deep-Research.

Jiajun Zhou, Xuanze Chen, Chenxuan Xie et al.

Graph Transformer (GT), as a special type of Graph Neural Networks (GNNs), utilizes multi-head attention to facilitate high-order message passing. However, this also imposes several limitations in node classification applications: 1) nodes are susceptible to global noise; 2) self-attention computation cannot scale well to large graphs. In this work, we conduct extensive observational experiments to explore the adaptability of the GT architecture in node classification tasks and draw several conclusions: the current multi-head self-attention module in GT can be completely replaceable, while the feed-forward neural network module proves to be valuable. Based on this, we decouple the propagation (P) and transformation (T) of GNNs and explore a powerful GT architecture, named GNNFormer, which is based on the P/T combination message passing and adapted for node classification in both homophilous and heterophilous scenarios. Extensive experiments on 12 benchmark datasets demonstrate that our proposed GT architecture can effectively adapt to node classification tasks without being affected by global noise and computational efficiency limitations.