Fei Dou

Xinyu Wang, Fei Dou, Jinbo Bi et al.

Linearized string representations serve as the foundation of scalable autoregressive molecular generation; however, they introduce a fundamental modality mismatch where a single molecular graph maps to multiple distinct sequences. This ambiguity leads to \textit{trajectory divergence}, where the latent representations of structurally equivalent partial graphs drift apart due to differences in linearization history. To resolve this without abandoning the efficient string formulation, we propose Structure-Invariant Generative Molecular Alignment (SIGMA). Rather than altering the linear representation, SIGMA enables the model to strictly recognize geometric symmetries via a token-level contrastive objective, which explicitly aligns the latent states of prefixes that share identical suffixes. Furthermore, we introduce Isomorphic Beam Search (IsoBeam) to eliminate isomorphic redundancy during inference by dynamically pruning equivalent paths. Empirical evaluations on standard benchmarks demonstrate that SIGMA bridges the gap between sequence scalability and graph fidelity, yielding superior sample efficiency and structural diversity in multi-parameter optimization compared to strong baselines.

Ziba Parsons, Fei Dou, Houyi Du et al.

This paper explores the challenges of implementing Federated Learning (FL) in practical scenarios featuring isolated nodes with data heterogeneity, which can only be connected to the server through wireless links in an infrastructure-less environment. To overcome these challenges, we propose a novel mobilizing personalized FL approach, which aims to facilitate mobility and resilience. Specifically, we develop a novel optimization algorithm called Random Walk Stochastic Alternating Direction Method of Multipliers (RWSADMM). RWSADMM capitalizes on the server's random movement toward clients and formulates local proximity among their adjacent clients based on hard inequality constraints rather than requiring consensus updates or introducing bias via regularization methods. To mitigate the computational burden on the clients, an efficient stochastic solver of the approximated optimization problem is designed in RWSADMM, which provably converges to the stationary point almost surely in expectation. Our theoretical and empirical results demonstrate the provable fast convergence and substantial accuracy improvements achieved by RWSADMM compared to baseline methods, along with its benefits of reduced communication costs and enhanced scalability.