Jingrui He

LG
h-index33
82papers
2,065citations
Novelty48%
AI Score59

82 Papers

20.2LGOct 7, 2022Code
Augmentations in Hypergraph Contrastive Learning: Fabricated and Generative

Tianxin Wei, Yuning You, Tianlong Chen et al.

This paper targets at improving the generalizability of hypergraph neural networks in the low-label regime, through applying the contrastive learning approach from images/graphs (we refer to it as HyperGCL). We focus on the following question: How to construct contrastive views for hypergraphs via augmentations? We provide the solutions in two folds. First, guided by domain knowledge, we fabricate two schemes to augment hyperedges with higher-order relations encoded, and adopt three vertex augmentation strategies from graph-structured data. Second, in search of more effective views in a data-driven manner, we for the first time propose a hypergraph generative model to generate augmented views, and then an end-to-end differentiable pipeline to jointly learn hypergraph augmentations and model parameters. Our technical innovations are reflected in designing both fabricated and generative augmentations of hypergraphs. The experimental findings include: (i) Among fabricated augmentations in HyperGCL, augmenting hyperedges provides the most numerical gains, implying that higher-order information in structures is usually more downstream-relevant; (ii) Generative augmentations do better in preserving higher-order information to further benefit generalizability; (iii) HyperGCL also boosts robustness and fairness in hypergraph representation learning. Codes are released at https://github.com/weitianxin/HyperGCL.

12.4LGMar 9, 2022Code
DISCO: Comprehensive and Explainable Disinformation Detection

Dongqi Fu, Yikun Ban, Hanghang Tong et al.

Disinformation refers to false information deliberately spread to influence the general public, and the negative impact of disinformation on society can be observed in numerous issues, such as political agendas and manipulating financial markets. In this paper, we identify prevalent challenges and advances related to automated disinformation detection from multiple aspects and propose a comprehensive and explainable disinformation detection framework called DISCO. It leverages the heterogeneity of disinformation and addresses the opaqueness of prediction. Then we provide a demonstration of DISCO on a real-world fake news detection task with satisfactory detection accuracy and explanation. The demo video and source code of DISCO is now publicly available https://github.com/DongqiFu/DISCO. We expect that our demo could pave the way for addressing the limitations of identification, comprehension, and explainability as a whole.

22.6LGAug 27, 2023Code
Class-Imbalanced Graph Learning without Class Rebalancing

Zhining Liu, Ruizhong Qiu, Zhichen Zeng et al.

Class imbalance is prevalent in real-world node classification tasks and poses great challenges for graph learning models. Most existing studies are rooted in a class-rebalancing (CR) perspective and address class imbalance with class-wise reweighting or resampling. In this work, we approach the root cause of class-imbalance bias from an topological paradigm. Specifically, we theoretically reveal two fundamental phenomena in the graph topology that greatly exacerbate the predictive bias stemming from class imbalance. On this basis, we devise a lightweight topological augmentation framework BAT to mitigate the class-imbalance bias without class rebalancing. Being orthogonal to CR, BAT can function as an efficient plug-and-play module that can be seamlessly combined with and significantly boost existing CR techniques. Systematic experiments on real-world imbalanced graph learning tasks show that BAT can deliver up to 46.27% performance gain and up to 72.74% bias reduction over existing techniques. Code, examples, and documentations are available at https://github.com/ZhiningLiu1998/BAT.

6.9LGAug 27, 2022Code
BOBA: Byzantine-Robust Federated Learning with Label Skewness

Wenxuan Bao, Jun Wu, Jingrui He

In federated learning, most existing robust aggregation rules (AGRs) combat Byzantine attacks in the IID setting, where client data is assumed to be independent and identically distributed. In this paper, we address label skewness, a more realistic and challenging non-IID setting, where each client only has access to a few classes of data. In this setting, state-of-the-art AGRs suffer from selection bias, leading to significant performance drop for particular classes; they are also more vulnerable to Byzantine attacks due to the increased variation among gradients of honest clients. To address these limitations, we propose an efficient two-stage method named BOBA. Theoretically, we prove the convergence of BOBA with an error of the optimal order. Our empirical evaluations demonstrate BOBA's superior unbiasedness and robustness across diverse models and datasets when compared to various baselines. Our code is available at https://github.com/baowenxuan/BOBA .

8.8LGJul 18, 2023Code
MLP Fusion: Towards Efficient Fine-tuning of Dense and Mixture-of-Experts Language Models

Mengting Ai, Tianxin Wei, Yifan Chen et al.

Fine-tuning a pre-trained language model (PLM) emerges as the predominant strategy in many natural language processing applications. However, this process is known to be expensive, especially on edge devices with low computing power. While general approaches (e.g. quantization and distillation) have been widely studied to reduce the compute/memory of PLM fine-tuning, one-shot compression techniques specifically designed for fine-tuning remain largely unexplored. In this paper, we investigate the neural tangent kernel (NTK)--which reveals the gradient descent dynamics of neural networks--of the multilayer perceptrons (MLP) modules in a PLM and propose to coin a lightweight PLM through NTK-approximating MLP fusion. By incorporating NTK into the compression process, MLP Fusion not only preserves the original model's output but also maintains its training dynamics. To achieve this, we reconsider the MLP as a bundle of sub-MLPs and cluster them into a given number of centroids, which can then be restored as a compressed MLP and surprisingly well approximate the NTK of the original PLM. Our approach is applicable to both standard MLP modules and Mixture-of-Experts (MoE) modules in PLMs, demonstrating its scalability and versatility. Additionally, we provide theoretical derivations to demonstrate how the proposed compression preserves the NTK. Extensive experiments of PLM fine-tuning on both natural language understanding and generation tasks are provided to verify the effectiveness of MLP fusion. Our code is available at https://github.com/weitianxin/MLP_Fusion.

21.1LGOct 28, 2023Code
Adaptive Test-Time Personalization for Federated Learning

Wenxuan Bao, Tianxin Wei, Haohan Wang et al.

Personalized federated learning algorithms have shown promising results in adapting models to various distribution shifts. However, most of these methods require labeled data on testing clients for personalization, which is usually unavailable in real-world scenarios. In this paper, we introduce a novel setting called test-time personalized federated learning (TTPFL), where clients locally adapt a global model in an unsupervised way without relying on any labeled data during test-time. While traditional test-time adaptation (TTA) can be used in this scenario, most of them inherently assume training data come from a single domain, while they come from multiple clients (source domains) with different distributions. Overlooking these domain interrelationships can result in suboptimal generalization. Moreover, most TTA algorithms are designed for a specific kind of distribution shift and lack the flexibility to handle multiple kinds of distribution shifts in FL. In this paper, we find that this lack of flexibility partially results from their pre-defining which modules to adapt in the model. To tackle this challenge, we propose a novel algorithm called ATP to adaptively learns the adaptation rates for each module in the model from distribution shifts among source domains. Theoretical analysis proves the strong generalization of ATP. Extensive experiments demonstrate its superiority in handling various distribution shifts including label shift, image corruptions, and domain shift, outperforming existing TTA methods across multiple datasets and model architectures. Our code is available at https://github.com/baowenxuan/ATP .

14.6LGOct 2, 2022Code
Improved Algorithms for Neural Active Learning

Yikun Ban, Yuheng Zhang, Hanghang Tong et al.

We improve the theoretical and empirical performance of neural-network(NN)-based active learning algorithms for the non-parametric streaming setting. In particular, we introduce two regret metrics by minimizing the population loss that are more suitable in active learning than the one used in state-of-the-art (SOTA) related work. Then, the proposed algorithm leverages the powerful representation of NNs for both exploitation and exploration, has the query decision-maker tailored for $k$-class classification problems with the performance guarantee, utilizes the full feedback, and updates parameters in a more practical and efficient manner. These careful designs lead to an instance-dependent regret upper bound, roughly improving by a multiplicative factor $O(\log T)$ and removing the curse of input dimensionality. Furthermore, we show that the algorithm can achieve the same performance as the Bayes-optimal classifier in the long run under the hard-margin setting in classification problems. In the end, we use extensive experiments to evaluate the proposed algorithm and SOTA baselines, to show the improved empirical performance.

13.4LGSep 15, 2024Code
Cluster Aware Graph Anomaly Detection

Lecheng Zheng, John R. Birge, Haiyue Wu et al.

Graph anomaly detection has gained significant attention across various domains, particularly in critical applications like fraud detection in e-commerce platforms and insider threat detection in cybersecurity. Usually, these data are composed of multiple types (e.g., user information and transaction records for financial data), thus exhibiting view heterogeneity. However, in the era of big data, the heterogeneity of views and the lack of label information pose substantial challenges to traditional approaches. Existing unsupervised graph anomaly detection methods often struggle with high-dimensionality issues, rely on strong assumptions about graph structures or fail to handle complex multi-view graphs. To address these challenges, we propose a cluster aware multi-view graph anomaly detection method, called CARE. Our approach captures both local and global node affinities by augmenting the graph's adjacency matrix with the pseudo-label (i.e., soft membership assignments) without any strong assumption about the graph. To mitigate potential biases from the pseudo-label, we introduce a similarity-guided loss. Theoretically, we show that the proposed similarity-guided loss is a variant of contrastive learning loss, and we present how this loss alleviates the bias introduced by pseudo-label with the connection to graph spectral clustering. Experimental results on several datasets demonstrate the effectiveness and efficiency of our proposed framework. Specifically, CARE outperforms the second-best competitors by more than 39% on the Amazon dataset with respect to AUPRC and 18.7% on the YelpChi dataset with respect to AUROC. The code of our method is available at the GitHub link: https://github.com/zhenglecheng/CARE-demo.

12.3LGJul 10, 2023
Privacy-Preserving Graph Machine Learning from Data to Computation: A Survey

Dongqi Fu, Wenxuan Bao, Ross Maciejewski et al.

In graph machine learning, data collection, sharing, and analysis often involve multiple parties, each of which may require varying levels of data security and privacy. To this end, preserving privacy is of great importance in protecting sensitive information. In the era of big data, the relationships among data entities have become unprecedentedly complex, and more applications utilize advanced data structures (i.e., graphs) that can support network structures and relevant attribute information. To date, many graph-based AI models have been proposed (e.g., graph neural networks) for various domain tasks, like computer vision and natural language processing. In this paper, we focus on reviewing privacy-preserving techniques of graph machine learning. We systematically review related works from the data to the computational aspects. We first review methods for generating privacy-preserving graph data. Then we describe methods for transmitting privacy-preserved information (e.g., graph model parameters) to realize the optimization-based computation when data sharing among multiple parties is risky or impossible. In addition to discussing relevant theoretical methodology and software tools, we also discuss current challenges and highlight several possible future research opportunities for privacy-preserving graph machine learning. Finally, we envision a unified and comprehensive secure graph machine learning system.

22.1LGDec 15, 2022Code
Non-IID Transfer Learning on Graphs

Jun Wu, Jingrui He, Elizabeth Ainsworth

Transfer learning refers to the transfer of knowledge or information from a relevant source domain to a target domain. However, most existing transfer learning theories and algorithms focus on IID tasks, where the source/target samples are assumed to be independent and identically distributed. Very little effort is devoted to theoretically studying the knowledge transferability on non-IID tasks, e.g., cross-network mining. To bridge the gap, in this paper, we propose rigorous generalization bounds and algorithms for cross-network transfer learning from a source graph to a target graph. The crucial idea is to characterize the cross-network knowledge transferability from the perspective of the Weisfeiler-Lehman graph isomorphism test. To this end, we propose a novel Graph Subtree Discrepancy to measure the graph distribution shift between source and target graphs. Then the generalization error bounds on cross-network transfer learning, including both cross-network node classification and link prediction tasks, can be derived in terms of the source knowledge and the Graph Subtree Discrepancy across domains. This thereby motivates us to propose a generic graph adaptive network (GRADE) to minimize the distribution shift between source and target graphs for cross-network transfer learning. Experimental results verify the effectiveness and efficiency of our GRADE framework on both cross-network node classification and cross-domain recommendation tasks.

5.2CRJun 30, 2022
Privacy-preserving Graph Analytics: Secure Generation and Federated Learning

Dongqi Fu, Jingrui He, Hanghang Tong et al.

Directly motivated by security-related applications from the Homeland Security Enterprise, we focus on the privacy-preserving analysis of graph data, which provides the crucial capacity to represent rich attributes and relationships. In particular, we discuss two directions, namely privacy-preserving graph generation and federated graph learning, which can jointly enable the collaboration among multiple parties each possessing private graph data. For each direction, we identify both "quick wins" and "hard problems". Towards the end, we demonstrate a user interface that can facilitate model explanation, interpretation, and visualization. We believe that the techniques developed in these directions will significantly enhance the capabilities of the Homeland Security Enterprise to tackle and mitigate the various security risks.

17.0IRJun 9, 2022Code
Comprehensive Fair Meta-learned Recommender System

Tianxin Wei, Jingrui He

In recommender systems, one common challenge is the cold-start problem, where interactions are very limited for fresh users in the systems. To address this challenge, recently, many works introduce the meta-optimization idea into the recommendation scenarios, i.e. learning to learn the user preference by only a few past interaction items. The core idea is to learn global shared meta-initialization parameters for all users and rapidly adapt them into local parameters for each user respectively. They aim at deriving general knowledge across preference learning of various users, so as to rapidly adapt to the future new user with the learned prior and a small amount of training data. However, previous works have shown that recommender systems are generally vulnerable to bias and unfairness. Despite the success of meta-learning at improving the recommendation performance with cold-start, the fairness issues are largely overlooked. In this paper, we propose a comprehensive fair meta-learning framework, named CLOVER, for ensuring the fairness of meta-learned recommendation models. We systematically study three kinds of fairness - individual fairness, counterfactual fairness, and group fairness in the recommender systems, and propose to satisfy all three kinds via a multi-task adversarial learning scheme. Our framework offers a generic training paradigm that is applicable to different meta-learned recommender systems. We demonstrate the effectiveness of CLOVER on the representative meta-learned user preference estimator on three real-world data sets. Empirical results show that CLOVER achieves comprehensive fairness without deteriorating the overall cold-start recommendation performance.

15.5LGJun 10, 2023Code
Optimizing the Collaboration Structure in Cross-Silo Federated Learning

Wenxuan Bao, Haohan Wang, Jun Wu et al.

In federated learning (FL), multiple clients collaborate to train machine learning models together while keeping their data decentralized. Through utilizing more training data, FL suffers from the potential negative transfer problem: the global FL model may even perform worse than the models trained with local data only. In this paper, we propose FedCollab, a novel FL framework that alleviates negative transfer by clustering clients into non-overlapping coalitions based on their distribution distances and data quantities. As a result, each client only collaborates with the clients having similar data distributions, and tends to collaborate with more clients when it has less data. We evaluate our framework with a variety of datasets, models, and types of non-IIDness. Our results demonstrate that FedCollab effectively mitigates negative transfer across a wide range of FL algorithms and consistently outperforms other clustered FL algorithms.

18.0LGAug 21, 2023
Graph Neural Bandits

Yunzhe Qi, Yikun Ban, Jingrui He

Contextual bandits algorithms aim to choose the optimal arm with the highest reward out of a set of candidates based on the contextual information. Various bandit algorithms have been applied to real-world applications due to their ability of tackling the exploitation-exploration dilemma. Motivated by online recommendation scenarios, in this paper, we propose a framework named Graph Neural Bandits (GNB) to leverage the collaborative nature among users empowered by graph neural networks (GNNs). Instead of estimating rigid user clusters as in existing works, we model the "fine-grained" collaborative effects through estimated user graphs in terms of exploitation and exploration respectively. Then, to refine the recommendation strategy, we utilize separate GNN-based models on estimated user graphs for exploitation and adaptive exploration. Theoretical analysis and experimental results on multiple real data sets in comparison with state-of-the-art baselines are provided to demonstrate the effectiveness of our proposed framework.

16.5LGAug 21, 2022Code
MentorGNN: Deriving Curriculum for Pre-Training GNNs

Dawei Zhou, Lecheng Zheng, Dongqi Fu et al.

Graph pre-training strategies have been attracting a surge of attention in the graph mining community, due to their flexibility in parameterizing graph neural networks (GNNs) without any label information. The key idea lies in encoding valuable information into the backbone GNNs, by predicting the masked graph signals extracted from the input graphs. In order to balance the importance of diverse graph signals (e.g., nodes, edges, subgraphs), the existing approaches are mostly hand-engineered by introducing hyperparameters to re-weight the importance of graph signals. However, human interventions with sub-optimal hyperparameters often inject additional bias and deteriorate the generalization performance in the downstream applications. This paper addresses these limitations from a new perspective, i.e., deriving curriculum for pre-training GNNs. We propose an end-to-end model named MentorGNN that aims to supervise the pre-training process of GNNs across graphs with diverse structures and disparate feature spaces. To comprehend heterogeneous graph signals at different granularities, we propose a curriculum learning paradigm that automatically re-weighs graph signals in order to ensure a good generalization in the target domain. Moreover, we shed new light on the problem of domain adaption on relational data (i.e., graphs) by deriving a natural and interpretable upper bound on the generalization error of the pre-trained GNNs. Extensive experiments on a wealth of real graphs validate and verify the performance of MentorGNN.

14.9LGMar 30, 2023
FairGen: Towards Fair Graph Generation

Lecheng Zheng, Dawei Zhou, Hanghang Tong et al.

There have been tremendous efforts over the past decades dedicated to the generation of realistic graphs in a variety of domains, ranging from social networks to computer networks, from gene regulatory networks to online transaction networks. Despite the remarkable success, the vast majority of these works are unsupervised in nature and are typically trained to minimize the expected graph reconstruction loss, which would result in the representation disparity issue in the generated graphs, i.e., the protected groups (often minorities) contribute less to the objective and thus suffer from systematically higher errors. In this paper, we aim to tailor graph generation to downstream mining tasks by leveraging label information and user-preferred parity constraints. In particular, we start from the investigation of representation disparity in the context of graph generative models. To mitigate the disparity, we propose a fairness-aware graph generative model named FairGen. Our model jointly trains a label-informed graph generation module and a fair representation learning module by progressively learning the behaviors of the protected and unprotected groups, from the `easy' concepts to the `hard' ones. In addition, we propose a generic context sampling strategy for graph generative models, which is proven to be capable of fairly capturing the contextual information of each group with a high probability. Experimental results on seven real-world data sets, including web-based graphs, demonstrate that FairGen (1) obtains performance on par with state-of-the-art graph generative models across nine network properties, (2) mitigates the representation disparity issues in the generated graphs, and (3) substantially boosts the model performance by up to 17% in downstream tasks via data augmentation.

11.1LGJun 19, 2022
Fairness-aware Model-agnostic Positive and Unlabeled Learning

Ziwei Wu, Jingrui He

With the increasing application of machine learning in high-stake decision-making problems, potential algorithmic bias towards people from certain social groups poses negative impacts on individuals and our society at large. In the real-world scenario, many such problems involve positive and unlabeled data such as medical diagnosis, criminal risk assessment and recommender systems. For instance, in medical diagnosis, only the diagnosed diseases will be recorded (positive) while others will not (unlabeled). Despite the large amount of existing work on fairness-aware machine learning in the (semi-)supervised and unsupervised settings, the fairness issue is largely under-explored in the aforementioned Positive and Unlabeled Learning (PUL) context, where it is usually more severe. In this paper, to alleviate this tension, we propose a fairness-aware PUL method named FairPUL. In particular, for binary classification over individuals from two populations, we aim to achieve similar true positive rates and false positive rates in both populations as our fairness metric. Based on the analysis of the optimal fair classifier for PUL, we design a model-agnostic post-processing framework, leveraging both the positive examples and unlabeled ones. Our framework is proven to be statistically consistent in terms of both the classification error and the fairness metric. Experiments on the synthetic and real-world data sets demonstrate that our framework outperforms state-of-the-art in both PUL and fair classification.

12.4LGJun 8, 2022
Neural Bandit with Arm Group Graph

Yunzhe Qi, Yikun Ban, Jingrui He

Contextual bandits aim to identify among a set of arms the optimal one with the highest reward based on their contextual information. Motivated by the fact that the arms usually exhibit group behaviors and the mutual impacts exist among groups, we introduce a new model, Arm Group Graph (AGG), where the nodes represent the groups of arms and the weighted edges formulate the correlations among groups. To leverage the rich information in AGG, we propose a bandit algorithm, AGG-UCB, where the neural networks are designed to estimate rewards, and we propose to utilize graph neural networks (GNN) to learn the representations of arm groups with correlations. To solve the exploitation-exploration dilemma in bandits, we derive a new upper confidence bound (UCB) built on neural networks (exploitation) for exploration. Furthermore, we prove that AGG-UCB can achieve a near-optimal regret bound with over-parameterized neural networks, and provide the convergence analysis of GNN with fully-connected layers which may be of independent interest. In the end, we conduct extensive experiments against state-of-the-art baselines on multiple public data sets, showing the effectiveness of the proposed algorithm.

9.8LGFeb 11, 2023Code
Fairness-aware Multi-view Clustering

Lecheng Zheng, Yada Zhu, Jingrui He

In the era of big data, we are often facing the challenge of data heterogeneity and the lack of label information simultaneously. In the financial domain (e.g., fraud detection), the heterogeneous data may include not only numerical data (e.g., total debt and yearly income), but also text and images (e.g., financial statement and invoice images). At the same time, the label information (e.g., fraud transactions) may be missing for building predictive models. To address these challenges, many state-of-the-art multi-view clustering methods have been proposed and achieved outstanding performance. However, these methods typically do not take into consideration the fairness aspect and are likely to generate biased results using sensitive information such as race and gender. Therefore, in this paper, we propose a fairness-aware multi-view clustering method named FairMVC. It incorporates the group fairness constraint into the soft membership assignment for each cluster to ensure that the fraction of different groups in each cluster is approximately identical to the entire data set. Meanwhile, we adopt the idea of both contrastive learning and non-contrastive learning and propose novel regularizers to handle heterogeneous data in complex scenarios with missing data or noisy features. Experimental results on real-world data sets demonstrate the effectiveness and efficiency of the proposed framework. We also derive insights regarding the relative performance of the proposed regularizers in various scenarios.

7.8LGJul 5, 2022Code
A Unified Meta-Learning Framework for Dynamic Transfer Learning

Jun Wu, Jingrui He

Transfer learning refers to the transfer of knowledge or information from a relevant source task to a target task. However, most existing works assume both tasks are sampled from a stationary task distribution, thereby leading to the sub-optimal performance for dynamic tasks drawn from a non-stationary task distribution in real scenarios. To bridge this gap, in this paper, we study a more realistic and challenging transfer learning setting with dynamic tasks, i.e., source and target tasks are continuously evolving over time. We theoretically show that the expected error on the dynamic target task can be tightly bounded in terms of source knowledge and consecutive distribution discrepancy across tasks. This result motivates us to propose a generic meta-learning framework L2E for modeling the knowledge transferability on dynamic tasks. It is centered around a task-guided meta-learning problem with a group of meta-pairs of tasks, based on which we are able to learn the prior model initialization for fast adaptation on the newest target task. L2E enjoys the following properties: (1) effective knowledge transferability across dynamic tasks; (2) fast adaptation to the new target task; (3) mitigation of catastrophic forgetting on historical target tasks; and (4) flexibility in incorporating any existing static transfer learning algorithms. Extensive experiments on various image data sets demonstrate the effectiveness of the proposed L2E framework.

13.0LGNov 13, 2025Code
Panda: Test-Time Adaptation with Negative Data Augmentation

Ruxi Deng, Wenxuan Bao, Tianxin Wei et al.

Pretrained VLMs exhibit strong zero-shot classification capabilities, but their predictions degrade significantly under common image corruptions. To improve robustness, many test-time adaptation (TTA) methods adopt positive data augmentation (PDA), which generates multiple views of each test sample to reduce prediction variance. However, these methods suffer from two key limitations. First, it introduces considerable computational overhead due to the large number of augmentations required per image. Second, it fails to mitigate prediction bias, where the model tends to predict certain classes disproportionately under corruption, as PDA operates on corrupted inputs and typically does not remove the corruption itself. To address these challenges, we propose Panda, a novel TTA method based on negative data augmentation (NDA). Unlike positive augmentations that preserve object semantics, Panda generates negative augmentations by disrupting semantic content. It divides images into patches and randomly assembles them from a shared patch pool. These negatively augmented images retain corruption-specific features while discarding object-relevant signals. We then subtract the mean feature of these negative samples from the original image feature, effectively suppressing corruption-related components while preserving class-relevant information. This mitigates prediction bias under distribution shifts. Panda allows augmentation to be shared across samples within a batch, resulting in minimal computational overhead. Panda can be seamlessly integrated into existing test-time adaptation frameworks and substantially improve their robustness. Our experiments indicate that Panda delivers superior performance compared to PDA methods, and a wide range of TTA methods exhibit significantly enhanced performance when integrated with Panda. Our code is available at https://github.com/ruxideng/Panda .

11.5LGAug 8, 2024
Generating Fine-Grained Causality in Climate Time Series Data for Forecasting and Anomaly Detection

Dongqi Fu, Yada Zhu, Hanghang Tong et al.

Understanding the causal interaction of time series variables can contribute to time series data analysis for many real-world applications, such as climate forecasting and extreme weather alerts. However, causal relationships are difficult to be fully observed in real-world complex settings, such as spatial-temporal data from deployed sensor networks. Therefore, to capture fine-grained causal relations among spatial-temporal variables for further a more accurate and reliable time series analysis, we first design a conceptual fine-grained causal model named TBN Granger Causality, which adds time-respecting Bayesian Networks to the previous time-lagged Neural Granger Causality to offset the instantaneous effects. Second, we propose an end-to-end deep generative model called TacSas, which discovers TBN Granger Causality in a generative manner to help forecast time series data and detect possible anomalies during the forecast. For evaluations, besides the causality discovery benchmark Lorenz-96, we also test TacSas on climate benchmark ERA5 for climate forecasting and the extreme weather benchmark of NOAA for extreme weather alerts.

14.2LGAug 10, 2024
Meta Clustering of Neural Bandits

Yikun Ban, Yunzhe Qi, Tianxin Wei et al.

The contextual bandit has been identified as a powerful framework to formulate the recommendation process as a sequential decision-making process, where each item is regarded as an arm and the objective is to minimize the regret of $T$ rounds. In this paper, we study a new problem, Clustering of Neural Bandits, by extending previous work to the arbitrary reward function, to strike a balance between user heterogeneity and user correlations in the recommender system. To solve this problem, we propose a novel algorithm called M-CNB, which utilizes a meta-learner to represent and rapidly adapt to dynamic clusters, along with an informative Upper Confidence Bound (UCB)-based exploration strategy. We provide an instance-dependent performance guarantee for the proposed algorithm that withstands the adversarial context, and we further prove the guarantee is at least as good as state-of-the-art (SOTA) approaches under the same assumptions. In extensive experiments conducted in both recommendation and online classification scenarios, M-CNB outperforms SOTA baselines. This shows the effectiveness of the proposed approach in improving online recommendation and online classification performance.

15.7LGSep 17, 2024
Fair Anomaly Detection For Imbalanced Groups

Ziwei Wu, Lecheng Zheng, Yuancheng Yu et al.

Anomaly detection (AD) has been widely studied for decades in many real-world applications, including fraud detection in finance, and intrusion detection for cybersecurity, etc. Due to the imbalanced nature between protected and unprotected groups and the imbalanced distributions of normal examples and anomalies, the learning objectives of most existing anomaly detection methods tend to solely concentrate on the dominating unprotected group. Thus, it has been recognized by many researchers about the significance of ensuring model fairness in anomaly detection. However, the existing fair anomaly detection methods tend to erroneously label most normal examples from the protected group as anomalies in the imbalanced scenario where the unprotected group is more abundant than the protected group. This phenomenon is caused by the improper design of learning objectives, which statistically focus on learning the frequent patterns (i.e., the unprotected group) while overlooking the under-represented patterns (i.e., the protected group). To address these issues, we propose FairAD, a fairness-aware anomaly detection method targeting the imbalanced scenario. It consists of a fairness-aware contrastive learning module and a rebalancing autoencoder module to ensure fairness and handle the imbalanced data issue, respectively. Moreover, we provide the theoretical analysis that shows our proposed contrastive learning regularization guarantees group fairness. Empirical studies demonstrate the effectiveness and efficiency of FairAD across multiple real-world datasets.

19.5CVNov 30, 2023
Dataset Distillation via the Wasserstein Metric

Haoyang Liu, Yijiang Li, Tiancheng Xing et al.

Dataset Distillation (DD) aims to generate a compact synthetic dataset that enables models to achieve performance comparable to training on the full large dataset, significantly reducing computational costs. Drawing from optimal transport theory, we introduce WMDD (Wasserstein Metric-based Dataset Distillation), a straightforward yet powerful method that employs the Wasserstein metric to enhance distribution matching. We compute the Wasserstein barycenter of features from a pretrained classifier to capture essential characteristics of the original data distribution. By optimizing synthetic data to align with this barycenter in feature space and leveraging per-class BatchNorm statistics to preserve intra-class variations, WMDD maintains the efficiency of distribution matching approaches while achieving state-of-the-art results across various high-resolution datasets. Our extensive experiments demonstrate WMDD's effectiveness and adaptability, highlighting its potential for advancing machine learning applications at scale.

18.8LGDec 23, 2024Code
APEX$^2$: Adaptive and Extreme Summarization for Personalized Knowledge Graphs

Zihao Li, Dongqi Fu, Mengting Ai et al.

Knowledge graphs (KGs), which store an extensive number of relational facts, serve various applications. Recently, personalized knowledge graphs (PKGs) have emerged as a solution to optimize storage costs by customizing their content to align with users' specific interests within particular domains. In the real world, on one hand, user queries and their underlying interests are inherently evolving, requiring PKGs to adapt continuously; on the other hand, the summarization is constantly expected to be as small as possible in terms of storage cost. However, the existing PKG summarization methods implicitly assume that the user's interests are constant and do not shift. Furthermore, when the size constraint of PKG is extremely small, the existing methods cannot distinguish which facts are more of immediate interest and guarantee the utility of the summarized PKG. To address these limitations, we propose APEX$^2$, a highly scalable PKG summarization framework designed with robust theoretical guarantees to excel in adaptive summarization tasks with extremely small size constraints. To be specific, after constructing an initial PKG, APEX$^2$ continuously tracks the interest shift and adjusts the previous summary. We evaluate APEX$^2$ under an evolving query setting on benchmark KGs containing up to 12 million triples, summarizing with compression ratios $\leq 0.1\%$. The experiments show that APEX outperforms state-of-the-art baselines in terms of both query-answering accuracy and efficiency. Code is available at https://github.com/iDEA-iSAIL-Lab-UIUC/APEX.

20.3LGDec 11, 2024Code
Can Graph Neural Networks Learn Language with Extremely Weak Text Supervision?

Zihao Li, Lecheng Zheng, Bowen Jin et al.

While great success has been achieved in building vision models with Contrastive Language-Image Pre-training (CLIP) over internet-scale image-text pairs, building transferable Graph Neural Networks (GNNs) with CLIP pipeline is challenging because of the scarcity of labeled data and text supervision, different levels of downstream tasks, and the conceptual gaps between domains. In this work, to address these issues, we propose a multi-modal prompt learning paradigm to effectively adapt pre-trained GNN to downstream tasks and data, given only a few semantically labeled samples, each with extremely weak text supervision. Our new paradigm embeds the graphs directly in the same space as the Large Language Models (LLMs) by learning both graph prompts and text prompts simultaneously. We demonstrate the superior performance of our paradigm in few-shot, multi-task-level, and cross-domain settings. Moreover, we build the first CLIP-style zero-shot classification prototype that can generalize GNNs to unseen classes with extremely weak text supervision. The code is available at https://github.com/Violet24K/Morpher.

12.0IRApr 29, 2024Code
SpherE: Expressive and Interpretable Knowledge Graph Embedding for Set Retrieval

Zihao Li, Yuyi Ao, Jingrui He

Knowledge graphs (KGs), which store an extensive number of relational facts (head, relation, tail), serve various applications. While many downstream tasks highly rely on the expressive modeling and predictive embedding of KGs, most of the current KG representation learning methods, where each entity is embedded as a vector in the Euclidean space and each relation is embedded as a transformation, follow an entity ranking protocol. On one hand, such an embedding design cannot capture many-to-many relations. On the other hand, in many retrieval cases, the users wish to get an exact set of answers without any ranking, especially when the results are expected to be precise, e.g., which genes cause an illness. Such scenarios are commonly referred to as "set retrieval". This work presents a pioneering study on the KG set retrieval problem. We show that the set retrieval highly depends on expressive modeling of many-to-many relations, and propose a new KG embedding model SpherE to address this problem. SpherE is based on rotational embedding methods, but each entity is embedded as a sphere instead of a vector. While inheriting the high interpretability of rotational-based models, our SpherE can more expressively model one-to-many, many-to-one, and many-to-many relations. Through extensive experiments, we show that our SpherE can well address the set retrieval problem while still having a good predictive ability to infer missing facts. The code is available at https://github.com/Violet24K/SpherE.

19.3LGDec 30, 2024Code
PyG-SSL: A Graph Self-Supervised Learning Toolkit

Lecheng Zheng, Baoyu Jing, Zihao Li et al.

Graph Self-Supervised Learning (SSL) has emerged as a pivotal area of research in recent years. By engaging in pretext tasks to learn the intricate topological structures and properties of graphs using unlabeled data, these graph SSL models achieve enhanced performance, improved generalization, and heightened robustness. Despite the remarkable achievements of these graph SSL methods, their current implementation poses significant challenges for beginners and practitioners due to the complex nature of graph structures, inconsistent evaluation metrics, and concerns regarding reproducibility hinder further progress in this field. Recognizing the growing interest within the research community, there is an urgent need for a comprehensive, beginner-friendly, and accessible toolkit consisting of the most representative graph SSL algorithms. To address these challenges, we present a Graph SSL toolkit named PyG-SSL, which is built upon PyTorch and is compatible with various deep learning and scientific computing backends. Within the toolkit, we offer a unified framework encompassing dataset loading, hyper-parameter configuration, model training, and comprehensive performance evaluation for diverse downstream tasks. Moreover, we provide beginner-friendly tutorials and the best hyper-parameters of each graph SSL algorithm on different graph datasets, facilitating the reproduction of results. The GitHub repository of the library is https://github.com/iDEA-iSAIL-Lab-UIUC/pyg-ssl.

28.5LGFeb 13, 2025Code
Language in the Flow of Time: Time-Series-Paired Texts Weaved into a Unified Temporal Narrative

Zihao Li, Xiao Lin, Zhining Liu et al.

While many advances in time series models focus exclusively on numerical data, research on multimodal time series, particularly those involving contextual textual information commonly encountered in real-world scenarios, remains in its infancy. With recent progress in large language models and time series learning, we revisit the integration of paired texts with time series through the Platonic Representation Hypothesis, which posits that representations of different modalities converge to shared spaces. In this context, we identify that time-series-paired texts may naturally exhibit periodic properties that closely mirror those of the original time series. Building on this insight, we propose a novel framework, Texts as Time Series (TaTS), which considers the time-series-paired texts to be auxiliary variables of the time series. TaTS can be plugged into any existing numerical-only time series models and enable them to handle time series data with paired texts effectively. Through extensive experiments on both multimodal time series forecasting and imputation tasks across benchmark datasets with various existing time series models, we demonstrate that TaTS can enhance predictive performance without modifying model architectures. Code available at https://github.com/iDEA-iSAIL-Lab-UIUC/TaTS.

22.0LGMar 10, 2025Code
ResMoE: Space-efficient Compression of Mixture of Experts LLMs via Residual Restoration

Mengting Ai, Tianxin Wei, Yifan Chen et al.

Mixture-of-Experts (MoE) Transformer, the backbone architecture of multiple phenomenal language models, leverages sparsity by activating only a fraction of model parameters for each input token. The sparse structure, while allowing constant time costs, results in space inefficiency: we still need to load all the model parameters during inference. We introduce ResMoE, an innovative MoE approximation framework that utilizes Wasserstein barycenter to extract a common expert (barycenter expert) and approximate the residuals between this barycenter expert and the original ones. ResMoE enhances the space efficiency for inference of large-scale MoE Transformers in a one-shot and data-agnostic manner without retraining while maintaining minimal accuracy loss, thereby paving the way for broader accessibility to large language models. We demonstrate the effectiveness of ResMoE through extensive experiments on Switch Transformer, Mixtral, and DeepSeekMoE models. The results show that ResMoE can reduce the number of parameters in an expert by up to 75% while maintaining comparable performance. The code is available at https://github.com/iDEA-iSAIL-Lab-UIUC/ResMoE.

23.4CLMay 22, 2025Code
Transformer Copilot: Learning from The Mistake Log in LLM Fine-tuning

Jiaru Zou, Yikun Ban, Zihao Li et al.

Large language models are typically adapted to downstream tasks through supervised fine-tuning on domain-specific data. While standard fine-tuning focuses on minimizing generation loss to optimize model parameters, we take a deeper step by retaining and leveraging the model's own learning signals, analogous to how human learners reflect on past mistakes to improve future performance. We first introduce the concept of Mistake Log to systematically track the model's learning behavior and recurring errors throughout fine-tuning. Treating the original transformer-based model as the Pilot, we correspondingly design a Copilot model to refine the Pilot's inference performance via logits rectification. We name the overall Pilot-Copilot framework the Transformer Copilot, which introduces (i) a novel Copilot model design, (ii) a joint training paradigm where the Copilot continuously learns from the evolving Mistake Log alongside the Pilot, and (iii) a fused inference paradigm where the Copilot rectifies the Pilot's logits for enhanced generation. We provide both theoretical and empirical analyses on our new learning framework. Experiments on 12 benchmarks spanning commonsense, arithmetic, and recommendation tasks demonstrate that Transformer Copilot consistently improves performance by up to 34.5%, while introducing marginal computational overhead to Pilot models and exhibiting strong scalability and transferability. Our code is released at https://github.com/jiaruzouu/TransformerCopilot.

13.1CVOct 19, 2025Code
Connecting Domains and Contrasting Samples: A Ladder for Domain Generalization

Tianxin Wei, Yifan Chen, Xinrui He et al.

Distribution shifts between training and testing samples frequently occur in practice and impede model generalization performance. This crucial challenge thereby motivates studies on domain generalization (DG), which aim to predict the label on unseen target domain data by solely using data from source domains. It is intuitive to conceive the class-separated representations learned in contrastive learning (CL) are able to improve DG, while the reality is quite the opposite: users observe directly applying CL deteriorates the performance. We analyze the phenomenon with the insights from CL theory and discover lack of intra-class connectivity in the DG setting causes the deficiency. We thus propose a new paradigm, domain-connecting contrastive learning (DCCL), to enhance the conceptual connectivity across domains and obtain generalizable representations for DG. On the data side, more aggressive data augmentation and cross-domain positive samples are introduced to improve intra-class connectivity. On the model side, to better embed the unseen test domains, we propose model anchoring to exploit the intra-class connectivity in pre-trained representations and complement the anchoring with generative transformation loss. Extensive experiments on five standard DG benchmarks are performed. The results verify that DCCL outperforms state-of-the-art baselines even without domain supervision. The detailed model implementation and the code are provided through https://github.com/weitianxin/DCCL

21.3LGMay 24, 2025Code
Breaking Silos: Adaptive Model Fusion Unlocks Better Time Series Forecasting

Zhining Liu, Ze Yang, Xiao Lin et al.

Time-series forecasting plays a critical role in many real-world applications. Although increasingly powerful models have been developed and achieved superior results on benchmark datasets, through a fine-grained sample-level inspection, we find that (i) no single model consistently outperforms others across different test samples, but instead (ii) each model excels in specific cases. These findings prompt us to explore how to adaptively leverage the distinct strengths of various forecasting models for different samples. We introduce TimeFuse, a framework for collective time-series forecasting with sample-level adaptive fusion of heterogeneous models. TimeFuse utilizes meta-features to characterize input time series and trains a learnable fusor to predict optimal model fusion weights for any given input. The fusor can leverage samples from diverse datasets for joint training, allowing it to adapt to a wide variety of temporal patterns and thus generalize to new inputs, even from unseen datasets. Extensive experiments demonstrate the effectiveness of TimeFuse in various long-/short-term forecasting tasks, achieving near-universal improvement over the state-of-the-art individual models. Code is available at https://github.com/ZhiningLiu1998/TimeFuse.

6.7CLDec 15, 2025
AutoTool: Dynamic Tool Selection and Integration for Agentic Reasoning

Jiaru Zou, Ling Yang, Yunzhe Qi et al.

Agentic reinforcement learning has advanced large language models (LLMs) to reason through long chain-of-thought trajectories while interleaving external tool use. Existing approaches assume a fixed inventory of tools, limiting LLM agents' adaptability to new or evolving toolsets. We present AutoTool, a framework that equips LLM agents with dynamic tool-selection capabilities throughout their reasoning trajectories. We first construct a 200k dataset with explicit tool-selection rationales across 1,000+ tools and 100+ tasks spanning mathematics, science, code generation, and multimodal reasoning. Building on this data foundation, AutoTool employs a dual-phase optimization pipeline: (i) supervised and RL-based trajectory stabilization for coherent reasoning, and (ii) KL-regularized Plackett-Luce ranking to refine consistent multi-step tool selection. Across ten diverse benchmarks, we train two base models, Qwen3-8B and Qwen2.5-VL-7B, with AutoTool. With fewer parameters, AutoTool consistently outperforms advanced LLM agents and tool-integration methods, yielding average gains of 6.4% in math & science reasoning, 4.5% in search-based QA, 7.7% in code generation, and 6.9% in multimodal understanding. In addition, AutoTool exhibits stronger generalization by dynamically leveraging unseen tools from evolving toolsets during inference.

17.6CLApr 2, 2025Code
RAG over Tables: Hierarchical Memory Index, Multi-Stage Retrieval, and Benchmarking

Jiaru Zou, Dongqi Fu, Sirui Chen et al.

Retrieval-Augmented Generation (RAG) enhances Large Language Models (LLMs) by integrating them with an external knowledge base to improve the answer relevance and accuracy. In real-world scenarios, beyond pure text, a substantial amount of knowledge is stored in tables, and user questions often require retrieving answers that are distributed across multiple tables. Retrieving knowledge from a table corpora (i.e., various individual tables) for a question remains nascent, at least, for (i) how to understand intra- and inter-table knowledge effectively, (ii) how to filter unnecessary tables and how to retrieve the most relevant tables efficiently, (iii) how to prompt LLMs to infer over the retrieval, (iv) how to evaluate the corresponding performance in a realistic setting. Facing the above challenges, in this paper, we first propose a table-corpora-aware RAG framework, named T-RAG, which consists of the hierarchical memory index, multi-stage retrieval, and graph-aware prompting for effective and efficient table knowledge retrieval and inference. Further, we first develop a multi-table question answering benchmark named MultiTableQA, which spans 3 different task types, 57,193 tables, and 23,758 questions in total, and the sources are all from real-world scenarios. Based on MultiTableQA, we did the holistic comparison over table retrieval methods, RAG methods, and table-to-graph representation learning methods, where T-RAG shows the leading accuracy, recall, and running time performance. Also, under T-RAG, we evaluate the inference ability upgrade of different LLMs. Code and Data are available at https://github.com/jiaruzouu/T-RAG

9.4LGSep 17, 2025Code
NIRVANA: Structured pruning reimagined for large language models compression

Mengting Ai, Tianxin Wei, Sirui Chen et al.

Structured pruning of large language models (LLMs) offers substantial efficiency improvements by removing entire hidden units, yet current approaches often suffer from significant performance degradation, particularly in zero-shot settings, and necessitate costly recovery techniques such as supervised fine-tuning (SFT) or adapter insertion. To address these critical shortcomings, we introduce NIRVANA, a novel pruning method explicitly designed to balance immediate zero-shot accuracy preservation with robust fine-tuning capability. Leveraging a first-order saliency criterion derived from the Neural Tangent Kernel under Adam optimization dynamics, NIRVANA provides a theoretically grounded pruning strategy that respects essential model training behaviors. To further address the unique challenges posed by structured pruning, NIRVANA incorporates an adaptive sparsity allocation mechanism across layers and modules (attention vs. MLP), which adjusts pruning intensity between modules in a globally balanced manner. Additionally, to mitigate the high sensitivity of pruning decisions to calibration data quality, we propose a simple yet effective KL divergence-based calibration data selection strategy, ensuring more reliable and task-agnostic pruning outcomes. Comprehensive experiments conducted on Llama3, Qwen, and T5 models demonstrate that NIRVANA outperforms existing structured pruning methods under equivalent sparsity constraints, providing a theoretically sound and practical approach to LLM compression. The code is available at https://github.com/iDEA-iSAIL-Lab-UIUC/NIRVANA.

13.0LGJun 10, 2025Code
Learnable Spatial-Temporal Positional Encoding for Link Prediction

Katherine Tieu, Dongqi Fu, Zihao Li et al.

Accurate predictions rely on the expressiveness power of graph deep learning frameworks like graph neural networks and graph transformers, where a positional encoding mechanism has become much more indispensable in recent state-of-the-art works to record the canonical position information. However, the current positional encoding is limited in three aspects: (1) most positional encoding methods use pre-defined, and fixed functions, which are inadequate to adapt to the complex attributed graphs; (2) a few pioneering works proposed the learnable positional encoding but are still limited to the structural information, not considering the real-world time-evolving topological and feature information; (3) most positional encoding methods are equipped with transformers' attention mechanism to fully leverage their capabilities, where the dense or relational attention is often unaffordable on large-scale structured data. Hence, we aim to develop Learnable Spatial-Temporal Positional Encoding in an effective and efficient manner and propose a simple temporal link prediction model named L-STEP. Briefly, for L-STEP, we (1) prove the proposed positional learning scheme can preserve the graph property from the spatial-temporal spectral viewpoint, (2) verify that MLPs can fully exploit the expressiveness and reach transformers' performance on that encoding, (3) change different initial positional encoding inputs to show robustness, (4) analyze the theoretical complexity and obtain less empirical running time than SOTA, and (5) demonstrate its temporal link prediction out-performance on 13 classic datasets and with 10 algorithms in both transductive and inductive settings using 3 different sampling strategies. Also, L-STEP obtains the leading performance in the newest large-scale TGB benchmark. Our code is available at https://github.com/kthrn22/L-STEP.

14.1LGJul 5, 2021Code
DPPIN: A Biological Repository of Dynamic Protein-Protein Interaction Network Data

Dongqi Fu, Jingrui He

In the big data era, the relationship between entries becomes more and more complex. Many graph (or network) algorithms have already paid attention to dynamic networks, which are more suitable than static ones for fitting the complex real-world scenarios with evolving structures and features. To contribute to the dynamic network representation learning and mining research, we provide a new bunch of label-adequate, dynamics-meaningful, and attribute-sufficient dynamic networks from the health domain. To be specific, in our proposed repository DPPIN, we totally have 12 individual dynamic network datasets at different scales, and each dataset is a dynamic protein-protein interaction network describing protein-level interactions of yeast cells. We hope these domain-specific node features, structure evolution patterns, and node and graph labels could inspire the regularization techniques to increase the performance of graph machine learning algorithms in a more complex setting. Also, we link potential applications with our DPPIN by designing various dynamic graph experiments, where DPPIN could indicate future research opportunities for some tasks by presenting challenges on state-of-the-art baseline algorithms. Finally, we identify future directions to improve the utility of this repository and welcome constructive inputs from the community. All resources (e.g., data and code) of this work are deployed and publicly available at https://github.com/DongqiFu/DPPIN.

22.3IRMar 15, 2024Code
Towards Unified Multi-Modal Personalization: Large Vision-Language Models for Generative Recommendation and Beyond

Tianxin Wei, Bowen Jin, Ruirui Li et al.

Developing a universal model that can effectively harness heterogeneous resources and respond to a wide range of personalized needs has been a longstanding community aspiration. Our daily choices, especially in domains like fashion and retail, are substantially shaped by multi-modal data, such as pictures and textual descriptions. These modalities not only offer intuitive guidance but also cater to personalized user preferences. However, the predominant personalization approaches mainly focus on the ID or text-based recommendation problem, failing to comprehend the information spanning various tasks or modalities. In this paper, our goal is to establish a Unified paradigm for Multi-modal Personalization systems (UniMP), which effectively leverages multi-modal data while eliminating the complexities associated with task- and modality-specific customization. We argue that the advancements in foundational generative modeling have provided the flexibility and effectiveness necessary to achieve the objective. In light of this, we develop a generic and extensible personalization generative framework, that can handle a wide range of personalized needs including item recommendation, product search, preference prediction, explanation generation, and further user-guided image generation. Our methodology enhances the capabilities of foundational language models for personalized tasks by seamlessly ingesting interleaved cross-modal user history information, ensuring a more precise and customized experience for users. To train and evaluate the proposed multi-modal personalized tasks, we also introduce a novel and comprehensive benchmark covering a variety of user requirements. Our experiments on the real-world benchmark showcase the model's potential, outperforming competitive methods specialized for each task.

25.1LGMar 24, 2024Code
VCR-Graphormer: A Mini-batch Graph Transformer via Virtual Connections

Dongqi Fu, Zhigang Hua, Yan Xie et al.

Graph transformer has been proven as an effective graph learning method for its adoption of attention mechanism that is capable of capturing expressive representations from complex topological and feature information of graphs. Graph transformer conventionally performs dense attention (or global attention) for every pair of nodes to learn node representation vectors, resulting in quadratic computational costs that are unaffordable for large-scale graph data. Therefore, mini-batch training for graph transformers is a promising direction, but limited samples in each mini-batch can not support effective dense attention to encode informative representations. Facing this bottleneck, (1) we start by assigning each node a token list that is sampled by personalized PageRank (PPR) and then apply standard multi-head self-attention only on this list to compute its node representations. This PPR tokenization method decouples model training from complex graph topological information and makes heavy feature engineering offline and independent, such that mini-batch training of graph transformers is possible by loading each node's token list in batches. We further prove this PPR tokenization is viable as a graph convolution network with a fixed polynomial filter and jumping knowledge. However, only using personalized PageRank may limit information carried by a token list, which could not support different graph inductive biases for model training. To this end, (2) we rewire graphs by introducing multiple types of virtual connections through structure- and content-based super nodes that enable PPR tokenization to encode local and global contexts, long-range interaction, and heterophilous information into each node's token list, and then formalize our Virtual Connection Ranking based Graph Transformer (VCR-Graphormer).

24.1LGMar 30, 2024
Heterogeneous Contrastive Learning for Foundation Models and Beyond

Lecheng Zheng, Baoyu Jing, Zihao Li et al.

In the era of big data and Artificial Intelligence, an emerging paradigm is to utilize contrastive self-supervised learning to model large-scale heterogeneous data. Many existing foundation models benefit from the generalization capability of contrastive self-supervised learning by learning compact and high-quality representations without relying on any label information. Amidst the explosive advancements in foundation models across multiple domains, including natural language processing and computer vision, a thorough survey on heterogeneous contrastive learning for the foundation model is urgently needed. In response, this survey critically evaluates the current landscape of heterogeneous contrastive learning for foundation models, highlighting the open challenges and future trends of contrastive learning. In particular, we first present how the recent advanced contrastive learning-based methods deal with view heterogeneity and how contrastive learning is applied to train and fine-tune the multi-view foundation models. Then, we move to contrastive learning methods for task heterogeneity, including pretraining tasks and downstream tasks, and show how different tasks are combined with contrastive learning loss for different purposes. Finally, we conclude this survey by discussing the open challenges and shedding light on the future directions of contrastive learning.

12.0IRNov 3, 2024Code
Co-clustering for Federated Recommender System

Xinrui He, Shuo Liu, Jackey Keung et al.

As data privacy and security attract increasing attention, Federated Recommender System (FRS) offers a solution that strikes a balance between providing high-quality recommendations and preserving user privacy. However, the presence of statistical heterogeneity in FRS, commonly observed due to personalized decision-making patterns, can pose challenges. To address this issue and maximize the benefit of collaborative filtering (CF) in FRS, it is intuitive to consider clustering clients (users) as well as items into different groups and learning group-specific models. Existing methods either resort to client clustering via user representations-risking privacy leakage, or employ classical clustering strategies on item embeddings or gradients, which we found are plagued by the curse of dimensionality. In this paper, we delve into the inefficiencies of the K-Means method in client grouping, attributing failures due to the high dimensionality as well as data sparsity occurring in FRS, and propose CoFedRec, a novel Co-clustering Federated Recommendation mechanism, to address clients heterogeneity and enhance the collaborative filtering within the federated framework. Specifically, the server initially formulates an item membership from the client-provided item networks. Subsequently, clients are grouped regarding a specific item category picked from the item membership during each communication round, resulting in an intelligently aggregated group model. Meanwhile, to comprehensively capture the global inter-relationships among items, we incorporate an additional supervised contrastive learning term based on the server-side generated item membership into the local training phase for each client. Extensive experiments on four datasets are provided, which verify the effectiveness of the proposed CoFedRec.

18.6IRMar 17, 2024Code
Logic Query of Thoughts: Guiding Large Language Models to Answer Complex Logic Queries with Knowledge Graphs

Lihui Liu, Zihao Wang, Ruizhong Qiu et al.

Despite the superb performance in many tasks, large language models (LLMs) bear the risk of generating hallucination or even wrong answers when confronted with tasks that demand the accuracy of knowledge. The issue becomes even more noticeable when addressing logic queries that require multiple logic reasoning steps. On the other hand, knowledge graph (KG) based question answering methods are capable of accurately identifying the correct answers with the help of knowledge graph, yet its accuracy could quickly deteriorate when the knowledge graph itself is sparse and incomplete. It remains a critical challenge on how to integrate knowledge graph reasoning with LLMs in a mutually beneficial way so as to mitigate both the hallucination problem of LLMs as well as the incompleteness issue of knowledge graphs. In this paper, we propose 'Logic-Query-of-Thoughts' (LGOT) which is the first of its kind to combine LLMs with knowledge graph based logic query reasoning. LGOT seamlessly combines knowledge graph reasoning and LLMs, effectively breaking down complex logic queries into easy to answer subquestions. Through the utilization of both knowledge graph reasoning and LLMs, it successfully derives answers for each subquestion. By aggregating these results and selecting the highest quality candidate answers for each step, LGOT achieves accurate results to complex questions. Our experimental findings demonstrate substantial performance enhancements, with up to 20% improvement over ChatGPT.

15.7LGApr 18, 2024
Neural Active Learning Beyond Bandits

Yikun Ban, Ishika Agarwal, Ziwei Wu et al.

We study both stream-based and pool-based active learning with neural network approximations. A recent line of works proposed bandit-based approaches that transformed active learning into a bandit problem, achieving both theoretical and empirical success. However, the performance and computational costs of these methods may be susceptible to the number of classes, denoted as $K$, due to this transformation. Therefore, this paper seeks to answer the question: "How can we mitigate the adverse impacts of $K$ while retaining the advantages of principled exploration and provable performance guarantees in active learning?" To tackle this challenge, we propose two algorithms based on the newly designed exploitation and exploration neural networks for stream-based and pool-based active learning. Subsequently, we provide theoretical performance guarantees for both algorithms in a non-parametric setting, demonstrating a slower error-growth rate concerning $K$ for the proposed approaches. We use extensive experiments to evaluate the proposed algorithms, which consistently outperform state-of-the-art baselines.

5.9DCNov 20, 2024
Transforming the Hybrid Cloud for Emerging AI Workloads

Deming Chen, Alaa Youssef, Ruchi Pendse et al.

This white paper, developed through close collaboration between IBM Research and UIUC researchers within the IIDAI Institute, envisions transforming hybrid cloud systems to meet the growing complexity of AI workloads through innovative, full-stack co-design approaches, emphasizing usability, manageability, affordability, adaptability, efficiency, and scalability. By integrating cutting-edge technologies such as generative and agentic AI, cross-layer automation and optimization, unified control plane, and composable and adaptive system architecture, the proposed framework addresses critical challenges in energy efficiency, performance, and cost-effectiveness. Incorporating quantum computing as it matures will enable quantum-accelerated simulations for materials science, climate modeling, and other high-impact domains. Collaborative efforts between academia and industry are central to this vision, driving advancements in foundation models for material design and climate solutions, scalable multimodal data processing, and enhanced physics-based AI emulators for applications like weather forecasting and carbon sequestration. Research priorities include advancing AI agentic systems, LLM as an Abstraction (LLMaaA), AI model optimization and unified abstractions across heterogeneous infrastructure, end-to-end edge-cloud transformation, efficient programming model, middleware and platform, secure infrastructure, application-adaptive cloud systems, and new quantum-classical collaborative workflows. These ideas and solutions encompass both theoretical and practical research questions, requiring coordinated input and support from the research community. This joint initiative aims to establish hybrid clouds as secure, efficient, and sustainable platforms, fostering breakthroughs in AI-driven applications and scientific discovery across academia, industry, and society.

23.8LGOct 28, 2024
LLM-Forest: Ensemble Learning of LLMs with Graph-Augmented Prompts for Data Imputation

Xinrui He, Yikun Ban, Jiaru Zou et al.

Missing data imputation is a critical challenge in various domains, such as healthcare and finance, where data completeness is vital for accurate analysis. Large language models (LLMs), trained on vast corpora, have shown strong potential in data generation, making them a promising tool for data imputation. However, challenges persist in designing effective prompts for a finetuning-free process and in mitigating biases and uncertainty in LLM outputs. To address these issues, we propose a novel framework, LLM-Forest, which introduces a "forest" of few-shot prompt learning LLM "trees" with their outputs aggregated via confidence-based weighted voting based on LLM self-assessment, inspired by the ensemble learning (Random Forest). This framework is established on a new concept of bipartite information graphs to identify high-quality relevant neighboring entries with both feature and value granularity. Extensive experiments on 9 real-world datasets demonstrate the effectiveness and efficiency of LLM-Forest.

12.4IRDec 21, 2023
Neural Contextual Bandits for Personalized Recommendation

Yikun Ban, Yunzhe Qi, Jingrui He

In the dynamic landscape of online businesses, recommender systems are pivotal in enhancing user experiences. While traditional approaches have relied on static supervised learning, the quest for adaptive, user-centric recommendations has led to the emergence of the formulation of contextual bandits. This tutorial investigates the contextual bandits as a powerful framework for personalized recommendations. We delve into the challenges, advanced algorithms and theories, collaborative strategies, and open challenges and future prospects within this field. Different from existing related tutorials, (1) we focus on the exploration perspective of contextual bandits to alleviate the ``Matthew Effect'' in the recommender systems, i.e., the rich get richer and the poor get poorer, concerning the popularity of items; (2) in addition to the conventional linear contextual bandits, we will also dedicated to neural contextual bandits which have emerged as an important branch in recent years, to investigate how neural networks benefit contextual bandits for personalized recommendation both empirically and theoretically; (3) we will cover the latest topic, collaborative neural contextual bandits, to incorporate both user heterogeneity and user correlations customized for recommender system; (4) we will provide and discuss the new emerging challenges and open questions for neural contextual bandits with applications in the personalized recommendation, especially for large neural models.

11.5LGFeb 4, 2024
Multi-modal Causal Structure Learning and Root Cause Analysis

Lecheng Zheng, Zhengzhang Chen, Jingrui He et al.

Effective root cause analysis (RCA) is vital for swiftly restoring services, minimizing losses, and ensuring the smooth operation and management of complex systems. Previous data-driven RCA methods, particularly those employing causal discovery techniques, have primarily focused on constructing dependency or causal graphs for backtracking the root causes. However, these methods often fall short as they rely solely on data from a single modality, thereby resulting in suboptimal solutions. In this work, we propose Mulan, a unified multi-modal causal structure learning method for root cause localization. We leverage a log-tailored language model to facilitate log representation learning, converting log sequences into time-series data. To explore intricate relationships across different modalities, we propose a contrastive learning-based approach to extract modality-invariant and modality-specific representations within a shared latent space. Additionally, we introduce a novel key performance indicator-aware attention mechanism for assessing modality reliability and co-learning a final causal graph. Finally, we employ random walk with restart to simulate system fault propagation and identify potential root causes. Extensive experiments on three real-world datasets validate the effectiveness of our proposed framework.

11.5LGDec 12, 2023
Contextual Bandits with Online Neural Regression

Rohan Deb, Yikun Ban, Shiliang Zuo et al.

Recent works have shown a reduction from contextual bandits to online regression under a realizability assumption [Foster and Rakhlin, 2020, Foster and Krishnamurthy, 2021]. In this work, we investigate the use of neural networks for such online regression and associated Neural Contextual Bandits (NeuCBs). Using existing results for wide networks, one can readily show a ${\mathcal{O}}(\sqrt{T})$ regret for online regression with square loss, which via the reduction implies a ${\mathcal{O}}(\sqrt{K} T^{3/4})$ regret for NeuCBs. Departing from this standard approach, we first show a $\mathcal{O}(\log T)$ regret for online regression with almost convex losses that satisfy QG (Quadratic Growth) condition, a generalization of the PL (Polyak-Łojasiewicz) condition, and that have a unique minima. Although not directly applicable to wide networks since they do not have unique minima, we show that adding a suitable small random perturbation to the network predictions surprisingly makes the loss satisfy QG with unique minima. Based on such a perturbed prediction, we show a ${\mathcal{O}}(\log T)$ regret for online regression with both squared loss and KL loss, and subsequently convert these respectively to $\tilde{\mathcal{O}}(\sqrt{KT})$ and $\tilde{\mathcal{O}}(\sqrt{KL^*} + K)$ regret for NeuCB, where $L^*$ is the loss of the best policy. Separately, we also show that existing regret bounds for NeuCBs are $Ω(T)$ or assume i.i.d. contexts, unlike this work. Finally, our experimental results on various datasets demonstrate that our algorithms, especially the one based on KL loss, persistently outperform existing algorithms.