Zhigang Hu

Tao Shen, Zhihang Hu, Siqi Sun et al.

Accurate prediction of RNA three-dimensional (3D) structure remains an unsolved challenge. Determining RNA 3D structures is crucial for understanding their functions and informing RNA-targeting drug development and synthetic biology design. The structural flexibility of RNA, which leads to scarcity of experimentally determined data, complicates computational prediction efforts. Here, we present RhoFold+, an RNA language model-based deep learning method that accurately predicts 3D structures of single-chain RNAs from sequences. By integrating an RNA language model pre-trained on ~23.7 million RNA sequences and leveraging techniques to address data scarcity, RhoFold+ offers a fully automated end-to-end pipeline for RNA 3D structure prediction. Retrospective evaluations on RNA-Puzzles and CASP15 natural RNA targets demonstrate RhoFold+'s superiority over existing methods, including human expert groups. Its efficacy and generalizability are further validated through cross-family and cross-type assessments, as well as time-censored benchmarks. Additionally, RhoFold+ predicts RNA secondary structures and inter-helical angles, providing empirically verifiable features that broaden its applicability to RNA structure and function studies.

Haodi Jiang, Qin Li, Zhihang Hu et al.

Solar activity is usually caused by the evolution of solar magnetic fields. Magnetic field parameters derived from photospheric vector magnetograms of solar active regions have been used to analyze and forecast eruptive events such as solar flares and coronal mass ejections. Unfortunately, the most recent solar cycle 24 was relatively weak with few large flares, though it is the only solar cycle in which consistent time-sequence vector magnetograms have been available through the Helioseismic and Magnetic Imager (HMI) on board the Solar Dynamics Observatory (SDO) since its launch in 2010. In this paper, we look into another major instrument, namely the Michelson Doppler Imager (MDI) on board the Solar and Heliospheric Observatory (SOHO) from 1996 to 2010. The data archive of SOHO/MDI covers more active solar cycle 23 with many large flares. However, SOHO/MDI data only has line-of-sight (LOS) magnetograms. We propose a new deep learning method, named MagNet, to learn from combined LOS magnetograms, Bx and By taken by SDO/HMI along with H-alpha observations collected by the Big Bear Solar Observatory (BBSO), and to generate vector components Bx' and By', which would form vector magnetograms with observed LOS data. In this way, we can expand the availability of vector magnetograms to the period from 1996 to present. Experimental results demonstrate the good performance of the proposed method. To our knowledge, this is the first time that deep learning has been used to generate photospheric vector magnetograms of solar active regions for SOHO/MDI using SDO/HMI and H-alpha data.

Zhihang Hu, Qinze Yu, Yucheng Guo et al.

Drug combination therapy is a well-established strategy for disease treatment with better effectiveness and less safety degradation. However, identifying novel drug combinations through wet-lab experiments is resource intensive due to the vast combinatorial search space. Recently, computational approaches, specifically deep learning models have emerged as an efficient way to discover synergistic combinations. While previous methods reported fair performance, their models usually do not take advantage of multi-modal data and they are unable to handle new drugs or cell lines. In this study, we collected data from various datasets covering various drug-related aspects. Then, we take advantage of large-scale pre-training models to generate informative representations and features for drugs, proteins, and diseases. Based on that, a message-passing graph is built on top to propagate information together with graph structure learning flexibility. This is first introduced in the biological networks and enables us to generate pseudo-relations in the graph. Our framework achieves state-of-the-art results in comparison with other deep learning-based methods on synergistic prediction benchmark datasets. We are also capable of inferencing new drug combination data in a test on an independent set released by AstraZeneca, where 10% of improvement over previous methods is observed. In addition, we're robust against unseen drugs and surpass almost 15% AU ROC compared to the second-best model. We believe our framework contributes to both the future wet-lab discovery of novel drugs and the building of promising guidance for precise combination medicine.

Bo Xu, Hao Zheng, Zhigang Hu et al.

In current synthetic aperture radar (SAR) object classification, one of the major challenges is the severe overfitting issue due to the limited dataset (few-shot) and noisy data. Considering the advantages of knowledge distillation as a learned label smoothing regularization, this paper proposes a novel Double Reverse Regularization Network based on Self-Knowledge Distillation (DRRNet-SKD). Specifically, through exploring the effect of distillation weight on the process of distillation, we are inspired to adopt the double reverse thought to implement an effective regularization network by combining offline and online distillation in a complementary way. Then, the Adaptive Weight Assignment (AWA) module is designed to adaptively assign two reverse-changing weights based on the network performance, allowing the student network to better benefit from both teachers. The experimental results on OpenSARShip and FUSAR-Ship demonstrate that DRRNet-SKD exhibits remarkable performance improvement on classical CNNs, outperforming state-of-the-art self-knowledge distillation methods.

Prathamesh Vasudeo Naik, Naresh Kumar Dintakurthi, Zhanghao Hu et al.

Generating regulatorily compliant Suspicious Activity Report (SAR) remains a high-cost, low-scalability bottleneck in Anti-Money Laundering (AML) workflows. While large language models (LLMs) offer promising fluency, they suffer from factual hallucination, limited crime typology alignment, and poor explainability -- posing unacceptable risks in compliance-critical domains. This paper introduces Co-Investigator AI, an agentic framework optimized to produce Suspicious Activity Reports (SARs) significantly faster and with greater accuracy than traditional methods. Drawing inspiration from recent advances in autonomous agent architectures, such as the AI Co-Scientist, our approach integrates specialized agents for planning, crime type detection, external intelligence gathering, and compliance validation. The system features dynamic memory management, an AI-Privacy Guard layer for sensitive data handling, and a real-time validation agent employing the Agent-as-a-Judge paradigm to ensure continuous narrative quality assurance. Human investigators remain firmly in the loop, empowered to review and refine drafts in a collaborative workflow that blends AI efficiency with domain expertise. We demonstrate the versatility of Co-Investigator AI across a range of complex financial crime scenarios, highlighting its ability to streamline SAR drafting, align narratives with regulatory expectations, and enable compliance teams to focus on higher-order analytical work. This approach marks the beginning of a new era in compliance reporting -- bringing the transformative benefits of AI agents to the core of regulatory processes and paving the way for scalable, reliable, and transparent SAR generation.

Pengfei Wang, Hao Zheng, Zhigang Hu et al.

Existing SAR image classification methods based on Contrastive Learning often rely on sample generation strategies designed for optical images, failing to capture the distinct semantic and physical characteristics of SAR data. To address this, we propose Physics-Driven Contrastive Mutual Learning for SAR Classification (PCM-SAR), which incorporates domain-specific physical insights to improve sample generation and feature extraction. PCM-SAR utilizes the gray-level co-occurrence matrix (GLCM) to simulate realistic noise patterns and applies semantic detection for unsupervised local sampling, ensuring generated samples accurately reflect SAR imaging properties. Additionally, a multi-level feature fusion mechanism based on mutual learning enables collaborative refinement of feature representations. Notably, PCM-SAR significantly enhances smaller models by refining SAR feature representations, compensating for their limited capacity. Experimental results show that PCM-SAR consistently outperforms SOTA methods across diverse datasets and SAR classification tasks.