Lu Tian

Bryan Cai, Sihang Zeng, Yucong Lin et al. · tsinghua

Electronic health records (EHR) contain narrative notes that provide extensive details on the medical condition and management of patients. Natural language processing (NLP) of clinical notes can use observed frequencies of clinical terms as predictive features for downstream applications such as clinical decision making and patient trajectory prediction. However, due to the vast number of highly similar and related clinical concepts, a more effective modeling strategy is to represent clinical terms as semantic embeddings via representation learning and use the low dimensional embeddings as feature vectors for predictive modeling. To achieve efficient representation, fine-tuning pretrained language models with biomedical knowledge graphs may generate better embeddings for biomedical terms than those from standard language models alone. These embeddings can effectively discriminate synonymous pairs of from those that are unrelated. However, they often fail to capture different degrees of similarity or relatedness for concepts that are hierarchical in nature. To overcome this limitation, we propose HiPrBERT, a novel biomedical term representation model trained on additionally complied data that contains hierarchical structures for various biomedical terms. We modify an existing contrastive loss function to extract information from these hierarchies. Our numerical experiments demonstrate that HiPrBERT effectively learns the pair-wise distance from hierarchical information, resulting in a substantially more informative embeddings for further biomedical applications

Takashi Isobe, Dong Li, Lu Tian et al.

In this work, we address the problem of unsupervised domain adaptation for person re-ID where annotations are available for the source domain but not for target. Previous methods typically follow a two-stage optimization pipeline, where the network is first pre-trained on source and then fine-tuned on target with pseudo labels created by feature clustering. Such methods sustain two main limitations. (1) The label noise may hinder the learning of discriminative features for recognizing target classes. (2) The domain gap may hinder knowledge transferring from source to target. We propose three types of technical schemes to alleviate these issues. First, we propose a cluster-wise contrastive learning algorithm (CCL) by iterative optimization of feature learning and cluster refinery to learn noise-tolerant representations in the unsupervised manner. Second, we adopt a progressive domain adaptation (PDA) strategy to gradually mitigate the domain gap between source and target data. Third, we propose Fourier augmentation (FA) for further maximizing the class separability of re-ID models by imposing extra constraints in the Fourier space. We observe that these proposed schemes are capable of facilitating the learning of discriminative feature representations. Experiments demonstrate that our method consistently achieves notable improvements over the state-of-the-art unsupervised re-ID methods on multiple benchmarks, e.g., surpassing MMT largely by 8.1\%, 9.9\%, 11.4\% and 11.1\% mAP on the Market-to-Duke, Duke-to-Market, Market-to-MSMT and Duke-to-MSMT tasks, respectively.

Lu Tian, Shengjin Wang

Person re-identification is generally divided into two part: first how to represent a pedestrian by discriminative visual descriptors and second how to compare them by suitable distance metrics. Conventional methods isolate these two parts, the first part usually unsupervised and the second part supervised. The Bag-of-Words (BoW) model is a widely used image representing descriptor in part one. Its codebook is simply generated by clustering visual features in Euclidian space. In this paper, we propose to use part two metric learning techniques in the codebook generation phase of BoW. In particular, the proposed codebook is clustered under Mahalanobis distance which is learned supervised. Extensive experiments prove that our proposed method is effective. With several low level features extracted on superpixel and fused together, our method outperforms state-of-the-art on person re-identification benchmarks including VIPeR, PRID450S, and Market1501.

Liang Zheng, Liyue Shen, Lu Tian et al.

For long time, person re-identification and image search are two separately studied tasks. However, for person re-identification, the effectiveness of local features and the "query-search" mode make it well posed for image search techniques. In the light of recent advances in image search, this paper proposes to treat person re-identification as an image search problem. Specifically, this paper claims two major contributions. 1) By designing an unsupervised Bag-of-Words representation, we are devoted to bridging the gap between the two tasks by integrating techniques from image search in person re-identification. We show that our system sets up an effective yet efficient baseline that is amenable to further supervised/unsupervised improvements. 2) We contribute a new high quality dataset which uses DPM detector and includes a number of distractor images. Our dataset reaches closer to realistic settings, and new perspectives are provided. Compared with approaches that rely on feature-feature match, our method is faster by over two orders of magnitude. Moreover, on three datasets, we report competitive results compared with the state-of-the-art methods.