Angshuman Chakravertty

Angshuman Chakravertty, Rahul Koshti, Buddhi Prakash Sharma et al.

Large language models (LLMs) show promise in code generation, but their capabilities to produce correct, synthesizable hardware description language (HDL) code still remain to be properly benchmarked. Existing evaluations are primarily relying on pass@k metrics and lack proper end-to-end toolchain validation. This paper presents a reproducible benchmarking platform that evaluates open-source LLMs on Verilog RTL generation across 50 curated tasks consisting of combinational, sequential, finite state machine (FSM), and mixed designs. The pipeline consisting of constrained prompting, post-processing, and semantic-aware iterative refinement with waveform analysis, formal equivalence verification, and Abstract Syntax Tree (AST)-based repair validates the generated code via Verilator compilation and Icarus Verilog simulation. Across the 12 benchmarks and the 1,610 total runs evaluating three models of different sizes (Llama-3-8B, StarCoder2-7B, and TinyLlama-1.1B), the pipeline improved syntax validity from 0% to a 70.43% average and simulation pass rate to 51.8% across three open-source models. Most notably TinyLlama (1.1B parameters) achieved the highest individual syntax validity at 80.0%, with functional correctness comparable to the 8B model. The platform and dataset are open-source, enabling reproducible evaluation of generative AI for hardware design workflows.

Angshuman Chakravertty, Rahul Maheshwari

Standard masked-language-model fine-tuning applies a uniform masking probability across every token position, assuming reconstruction difficulty is position-agnostic. When the degradation process is characterised and concentrated at predictable positions, this assumption fails: at peak damage sites the model can underperform a frequency-matched random predictor. We introduce VESTIGE, a parameter-free, drop-in replacement for the standard MLM collator that aligns the masking distribution with an empirically measured per-position corruption profile. We apply it to ancient DNA (aDNA) reconstruction, where cytosine deamination produces a position-dependent C-to-T / G-to-A gradient quantified per-position by mapDamage2. Rescaling so the mean C/G masking rate equals 15% - identical to standard MLM - isolates spatial redistribution as the sole variable, with model, data, seed, and hyperparameters held fixed across both DNABERT-2 runs on a mammoth CDS corpus (two specimens, seven genes). Across six terminal-zone widths and 626 paired windows, VESTIGE leads standard MLM at every width (Delta = +4.18 to +10.35 pp, all p < 10^-8), cuts validation cross-entropy by 13% (3.274 vs. 3.757), and yields ESMFold reconstructions with TM-score > 0.95 across all six reconstructions (three genes) even under damage amplified 10-30x beyond authentic PMD rates. A 1D CNN biosecurity classifier returns AUC = 0.935 and clears 98.2% of reconstructed windows, the 1.76% remainder attributable to reference-genome features, not reconstruction artefacts. The principle is domain-agnostic: any measurable position- or context-specific corruption profile - FFPE, bisulfite, metagenomic, or nanopore - substitutes directly for the PMD array, making VESTIGE a knowledge-guided training routine for intelligent systems operating on degraded or noisy sequence inputs.