CRTS: A type system for representing clinical recommendations
This work addresses the need for structured representation of clinical guidelines to improve dissemination and automatic application in evidence-based medicine, though it is incremental as it builds on existing type system concepts for a specific domain.
The paper tackles the problem of representing clinical recommendations, which are typically unstructured and heterogeneous, by introducing CRTS, a type system that can effectively structure these recommendations and is shown to be precise and comprehensive across a large sample of disorders.
Background: Clinical guidelines and recommendations are the driving wheels of the evidence-based medicine (EBM) paradigm, but these are available primarily as unstructured text and are generally highly heterogeneous in nature. This significantly reduces the dissemination and automatic application of these recommendations at the point of care. A comprehensive structured representation of these recommendations is highly beneficial in this regard. Objective: The objective of this paper to present Clinical Recommendation Type System (CRTS), a common type system that can effectively represent a clinical recommendation in a structured form. Methods: CRTS is built by analyzing 125 recommendations and 195 research articles corresponding to 6 different diseases available from UpToDate, a publicly available clinical knowledge system, and from the National Guideline Clearinghouse, a public resource for evidence-based clinical practice guidelines. Results: We show that CRTS not only covers the recommendations but also is flexible to be extended to represent information from primary literature. We also describe how our developed type system can be applied for clinical decision support, medical knowledge summarization, and citation retrieval. Conclusion: We showed that our proposed type system is precise and comprehensive in representing a large sample of recommendations available for various disorders. CRTS can now be used to build interoperable information extraction systems that automatically extract clinical recommendations and related data elements from clinical evidence resources, guidelines, systematic reviews and primary publications. Keywords: guidelines and recommendations, type system, clinical decision support, evidence-based medicine, information storage and retrieval