LGMLNov 28, 2018

Effective Ways to Build and Evaluate Individual Survival Distributions

arXiv:1811.11347v1142 citations
Originality Synthesis-oriented
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This work tackles the problem of improving personalized treatment decisions for terminal patients by enhancing the evaluation of survival prediction models, though it is incremental as it builds on existing ISD methods.

The paper addresses the need for accurate individual survival distribution (ISD) models to provide personalized survival probabilities across all times, and introduces a novel evaluation metric called D-Calibration to assess the meaningfulness of probability estimates.

An accurate model of a patient's individual survival distribution can help determine the appropriate treatment for terminal patients. Unfortunately, risk scores (e.g., from Cox Proportional Hazard models) do not provide survival probabilities, single-time probability models (e.g., the Gail model, predicting 5 year probability) only provide for a single time point, and standard Kaplan-Meier survival curves provide only population averages for a large class of patients meaning they are not specific to individual patients. This motivates an alternative class of tools that can learn a model which provides an individual survival distribution which gives survival probabilities across all times - such as extensions to the Cox model, Accelerated Failure Time, an extension to Random Survival Forests, and Multi-Task Logistic Regression. This paper first motivates such "individual survival distribution" (ISD) models, and explains how they differ from standard models. It then discusses ways to evaluate such models - namely Concordance, 1-Calibration, Brier score, and various versions of L1-loss - and then motivates and defines a novel approach "D-Calibration", which determines whether a model's probability estimates are meaningful. We also discuss how these measures differ, and use them to evaluate several ISD prediction tools, over a range of survival datasets.

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