COLGMEMLSep 25, 2019

bamlss: A Lego Toolbox for Flexible Bayesian Regression (and Beyond)

arXiv:1909.11784v146 citations
Originality Synthesis-oriented
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This provides a practical tool for researchers and practitioners in statistics and data science to build custom Bayesian models, though it is incremental as it integrates existing methods into a unified framework.

The authors tackled the lack of modular software for flexible Bayesian regression by introducing the R package bamlss, which enables easy combination of probabilistic modeling, flexible specifications, and Bayesian inference, demonstrating its application to models like GAMs and GAMLSS.

Over the last decades, the challenges in applied regression and in predictive modeling have been changing considerably: (1) More flexible model specifications are needed as big(ger) data become available, facilitated by more powerful computing infrastructure. (2) Full probabilistic modeling rather than predicting just means or expectations is crucial in many applications. (3) Interest in Bayesian inference has been increasing both as an appealing framework for regularizing or penalizing model estimation as well as a natural alternative to classical frequentist inference. However, while there has been a lot of research in all three areas, also leading to associated software packages, a modular software implementation that allows to easily combine all three aspects has not yet been available. For filling this gap, the R package bamlss is introduced for Bayesian additive models for location, scale, and shape (and beyond). At the core of the package are algorithms for highly-efficient Bayesian estimation and inference that can be applied to generalized additive models (GAMs) or generalized additive models for location, scale, and shape (GAMLSS), also known as distributional regression. However, its building blocks are designed as "Lego bricks" encompassing various distributions (exponential family, Cox, joint models, ...), regression terms (linear, splines, random effects, tensor products, spatial fields, ...), and estimators (MCMC, backfitting, gradient boosting, lasso, ...). It is demonstrated how these can be easily recombined to make classical models more flexible or create new custom models for specific modeling challenges.

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