CLMar 6, 2020

Sensitive Data Detection and Classification in Spanish Clinical Text: Experiments with BERT

arXiv:2003.03106v2999 citations
AI Analysis

This addresses privacy preservation in clinical data processing for Spanish-language healthcare applications, but it is incremental as it applies an existing method to a new domain and language.

The paper tackled the problem of automatically detecting and classifying sensitive information in Spanish clinical text for anonymization, using a BERT-based sequence labeling model, and achieved highly competitive results without domain-specific feature engineering.

Massive digital data processing provides a wide range of opportunities and benefits, but at the cost of endangering personal data privacy. Anonymisation consists in removing or replacing sensitive information from data, enabling its exploitation for different purposes while preserving the privacy of individuals. Over the years, a lot of automatic anonymisation systems have been proposed; however, depending on the type of data, the target language or the availability of training documents, the task remains challenging still. The emergence of novel deep-learning models during the last two years has brought large improvements to the state of the art in the field of Natural Language Processing. These advancements have been most noticeably led by BERT, a model proposed by Google in 2018, and the shared language models pre-trained on millions of documents. In this paper, we use a BERT-based sequence labelling model to conduct a series of anonymisation experiments on several clinical datasets in Spanish. We also compare BERT to other algorithms. The experiments show that a simple BERT-based model with general-domain pre-training obtains highly competitive results without any domain specific feature engineering.

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