NodeFormer: A Scalable Graph Structure Learning Transformer for Node Classification
This work addresses scalability and flexibility issues in graph learning for applications like node classification, offering a novel approach that is incremental in improving efficiency over existing methods.
The authors tackled the problem of graph neural networks' limitations in scalability and handling missing or complex graph structures by introducing NodeFormer, a Transformer-style model for node classification that achieves linear complexity and demonstrates strong performance on large graphs with up to 2 million nodes.
Graph neural networks have been extensively studied for learning with inter-connected data. Despite this, recent evidence has revealed GNNs' deficiencies related to over-squashing, heterophily, handling long-range dependencies, edge incompleteness and particularly, the absence of graphs altogether. While a plausible solution is to learn new adaptive topology for message passing, issues concerning quadratic complexity hinder simultaneous guarantees for scalability and precision in large networks. In this paper, we introduce a novel all-pair message passing scheme for efficiently propagating node signals between arbitrary nodes, as an important building block for a pioneering Transformer-style network for node classification on large graphs, dubbed as \textsc{NodeFormer}. Specifically, the efficient computation is enabled by a kernerlized Gumbel-Softmax operator that reduces the algorithmic complexity to linearity w.r.t. node numbers for learning latent graph structures from large, potentially fully-connected graphs in a differentiable manner. We also provide accompanying theory as justification for our design. Extensive experiments demonstrate the promising efficacy of the method in various tasks including node classification on graphs (with up to 2M nodes) and graph-enhanced applications (e.g., image classification) where input graphs are missing.