CHEM-PHCELGCOMP-PHJul 21, 2024

${\it Asparagus}$: A Toolkit for Autonomous, User-Guided Construction of Machine-Learned Potential Energy Surfaces

arXiv:2407.15175v112 citationsh-index: 10
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This toolkit addresses the problem of accessibility and reproducibility for researchers in physics and chemistry by providing a modular, user-friendly package, though it is incremental as it consolidates existing methods rather than introducing new ones.

The authors tackled the challenge of constructing machine-learned potential energy surfaces (ML-PES) by introducing Asparagus, a software toolkit that integrates data sampling, model training, and evaluation into a coherent framework, enabling autonomous and user-guided workflows for applications like molecular dynamics and reactive potentials.

With the establishment of machine learning (ML) techniques in the scientific community, the construction of ML potential energy surfaces (ML-PES) has become a standard process in physics and chemistry. So far, improvements in the construction of ML-PES models have been conducted independently, creating an initial hurdle for new users to overcome and complicating the reproducibility of results. Aiming to reduce the bar for the extensive use of ML-PES, we introduce ${\it Asparagus}$, a software package encompassing the different parts into one coherent implementation that allows an autonomous, user-guided construction of ML-PES models. ${\it Asparagus}$ combines capabilities of initial data sampling with interfaces to ${\it ab initio}$ calculation programs, ML model training, as well as model evaluation and its application within other codes such as ASE or CHARMM. The functionalities of the code are illustrated in different examples, including the dynamics of small molecules, the representation of reactive potentials in organometallic compounds, and atom diffusion on periodic surface structures. The modular framework of ${\it Asparagus}$ is designed to allow simple implementations of further ML-related methods and models to provide constant user-friendly access to state-of-the-art ML techniques.

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