Integrated representational signatures strengthen specificity in brains and models
This work addresses the challenge of accurately comparing representations across systems in neuroscience and machine learning, offering a more specific and robust method for analyzing brain and model data.
The study tackled the problem of comparing neural and artificial neural network representations by integrating multiple similarity metrics, resulting in substantially sharper separation of brain regions and model families and revealing a clearer hierarchical organization of the visual cortex that aligns closely with established anatomical and functional hierarchies.
The extent to which different neural or artificial neural networks (models) rely on equivalent representations to support similar tasks remains a central question in neuroscience and machine learning. Prior work has typically compared systems using a single representational similarity metric, yet each captures only one facet of representational structure. To address this, we leverage a suite of representational similarity metrics-each capturing a distinct facet of representational correspondence, such as geometry, unit-level tuning, or linear decodability-and assess brain region or model separability using multiple complementary measures. Metrics that preserve geometric or tuning structure (e.g., RSA, Soft Matching) yield stronger region-based discrimination, whereas more flexible mappings such as Linear Predictivity show weaker separation. These findings suggest that geometry and tuning encode brain-region- or model-family-specific signatures, while linearly decodable information tends to be more globally shared across regions or models. To integrate these complementary representational facets, we adapt Similarity Network Fusion (SNF), a framework originally developed for multi-omics data integration. SNF produces substantially sharper regional and model family-level separation than any single metric and yields robust composite similarity profiles. Moreover, clustering cortical regions using SNF-derived similarity scores reveals a clearer hierarchical organization that aligns closely with established anatomical and functional hierarchies of the visual cortex-surpassing the correspondence achieved by individual metrics.