Sparse Data Tree Canopy Segmentation: Fine-Tuning Leading Pretrained Models on Only 150 Images
This work addresses data scarcity in environmental monitoring for researchers and practitioners, but it is incremental as it evaluates existing methods on a new dataset without introducing novel techniques.
The study tackled tree canopy detection from aerial imagery with only 150 annotated images, finding that pretrained CNN-based models like YOLOv11 and Mask R-CNN generalized significantly better than transformer-based models, which struggled due to high data requirements and task differences.
Tree canopy detection from aerial imagery is an important task for environmental monitoring, urban planning, and ecosystem analysis. Simulating real-life data annotation scarcity, the Solafune Tree Canopy Detection competition provides a small and imbalanced dataset of only 150 annotated images, posing significant challenges for training deep models without severe overfitting. In this work, we evaluate five representative architectures, YOLOv11, Mask R-CNN, DeepLabv3, Swin-UNet, and DINOv2, to assess their suitability for canopy segmentation under extreme data scarcity. Our experiments show that pretrained convolution-based models, particularly YOLOv11 and Mask R-CNN, generalize significantly better than pretrained transformer-based models. DeeplabV3, Swin-UNet and DINOv2 underperform likely due to differences between semantic and instance segmentation tasks, the high data requirements of Vision Transformers, and the lack of strong inductive biases. These findings confirm that transformer-based architectures struggle in low-data regimes without substantial pretraining or augmentation and that differences between semantic and instance segmentation further affect model performance. We provide a detailed analysis of training strategies, augmentation policies, and model behavior under the small-data constraint and demonstrate that lightweight CNN-based methods remain the most reliable for canopy detection on limited imagery.