A computational framework to predict the spreading of Alzheimer's disease
This work provides a computational tool for studying Alzheimer's disease progression, potentially aiding researchers in understanding and predicting subject-specific brain changes, though it is incremental in applying existing methods to this domain.
The authors tackled the challenge of linking microscopic protein dynamics to macroscopic brain degeneration in Alzheimer's disease by developing a computational framework that models disease progression using reaction-diffusion equations and hyperelastic tissue deformation. The model reproduces key morphological patterns and shows good quantitative agreement with longitudinal imaging measurements.
Alzheimer's disease is characterised by the spreading of misfolded proteins and progressive structural changes in the brain. Despite significant clinical research, understanding how microscopic protein dynamics translate into macroscopic tissue degeneration remains a major challenge. In this work, we present a three-dimensional, finite element-based computational framework to model disease progression by combining multi-protein transport and brain tissue deformation within anatomically realistic geometries. The propagation of toxic tau and amyloid-beta proteins is described using reaction-diffusion equations of the Fisher-Kolmogorov type, incorporating prion-like growth mechanisms and anisotropic transport along white matter fibre tracts. Brain atrophy is represented through a hyperelastic constitutive model driven by protein-dependent volume loss. Subject-specific simulations are achieved through an automated preprocessing pipeline that generates finite element meshes and reconstructs axonal orientation fields from medical imaging data. The model reproduces key morphological patterns observed in Alzheimer's disease and shows good quantitative agreement with longitudinal imaging measurements. Overall, the proposed framework offers an extensible computational platform for studying Alzheimer's disease progression across subject-specific brain geometries. The models developed, including the image processing framework (BrainImage2Mesh) and the coupled bio-chemo-mechanical COMSOL finite element implementation, are made freely available to download at https://mechmat.web.ox.ac.uk/codes.